BAC Information

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BAC

Clone NameB6Ng01-185P10
Chromosome1 (Build37)
Map Location 74,611,812 - 74,708,000
singlet/doubletdoublet
Overlap genePlcd4, Zfp142, Bcs1l, Rnf25, Stk36
Upstream geneTns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1, Usp37, Rqcd1
Downstream geneTtll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185P10.bB6Ng01-185P10.g
ACCGA010935GA010936
length1,060925
definitionB6Ng01-185P10.b B6Ng01-185P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,706,954 - 74,708,000)(74,611,812 - 74,612,731)
sequence
gaattcctaccaaaattccatgagtttgaggcaagtaagaggaagtggct
caaggcactttaactctctcccactcacctttccctaaatccaaacacgg
agcgggacgagacaaagcaagacataactacaactaccagttttatgggc
ttcgagtgagaactttacctaagtgtgagtcctttcataatctctccacg
cagaatagatccccctgtttcagatgtcgctggatctattaaatttagag
aactataaagtcagctggatggcaaaaggagctttctcaaacaggctatg
ataattaacgatataactaacctgatgaggcctgggcaccggttgtgcac
ttctttaaccccaccattcggtaggctgaggcaggtggatctctgagtat
gaggacagcctggtctgcagagtgagttcagatcagctagggctatgcag
agaaaaactagcctggtgaaaacaatttgaacttagtagcaaaatactta
agcaacagtcattgacagatgttgaactatgaaagggttacttatcaatt
ttagatcaggaaatctagggcaattatctagtttgtctcctgatgagatt
tggattacacagcaatatttataaagtatggcttattttacaaaatgtta
aattttaacaatttaaaagctgaatctaatcaagcattgactctaacttc
agtatacaggatatagaggaaaacaattgagtaatgctatagaatcagat
aaattcagaattttaaccaatatacagtataaatgaacttttcttagaca
aaatgggagtgctggagctgaagaaaaatgttgggagccgcgcccacatt
cgccgttacaagatggcgctgacagcttgtgttctaagtggtaaaccaaa
taatctgcgcatgtgccaagggtatctttatgactactttgtgctctgcc
ttccccgtgacgtcaacctcggcccgattgggctgcagccaatccaagga
gtgactcgtcctaggcgaaaggaggaatccttccttaatagggacggggg
tttcgttttc
gaattcttctgcccatttccaggctaccgacatgtatccttgctctccag
agatggcactagcctcaatccagcttccatctttgtatacacctgcatgc
aggaagacctggatatggatgagccctgaggtgggtgttccacagcaaga
gtgaatagatatattggctttagacgtcaaggtactaaattgccttgtcc
cccacccctgttcccctaagacaccgtcttactatgtagcctaggctgtc
ctggaactcactatatatagaccaggctgcccccaaactcatagagatct
atctgcctctgactccagagtgctggcattaaaggcgtgagctgctctga
ctggcataccttgcccttattaagtaaatctaatctttctttagtctttc
ctgtcctcccttttgtgcactcttatgtgagagtttactccttattcttg
ccctaggcttaattccattctcagattctctgttaatctttcctatcatc
tctgactagaaacacagggagggccttgaagaacaatctacagatgcaca
atcctttccaacctacaacttcctcaaaatccagagccagccaaaggatc
aatgaaggatcaaggttgccaggcaaaggttgaggaagaatgcctgactc
aaaactgtgactctagagaacaatgcacagccctgagaccccactggact
gctgctccttagctggtctaaatagagcttctctgtccgatttggctctt
gtatggtctgtcattgttgggcaagaaaggggaagtagagaagggggggc
ttgcggtgcagagaaacgacgtttccaagggctctcctctttgtgctgcg
ttagaagggaattggaagagaagccttataggaatggggcaagagcagga
tagggttgtaatagcccttccccgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_74706954_74708000
seq2: B6Ng01-185P10.b_42_1101 (reverse)

seq1  GAAAACGAAA-CCCCGTCCCTATTAAGGA--GAATTCTCC-TTCGCCTAG  46
      |||||||||| ||||||||||||||||||  || | |||| |||||||||
seq2  GAAAACGAAACCCCCGTCCCTATTAAGGAAGGATTCCTCCTTTCGCCTAG  50

seq1  GACGTGTCACTCCCT-GATTGGCTGCAGCCC-ATC-GGCCGA-GTTGACG  92
      |||| |||||||| | ||||||||||||||| ||| |||||| |||||||
seq2  GACGAGTCACTCCTTGGATTGGCTGCAGCCCAATCGGGCCGAGGTTGACG  100

seq1  TCACGGGGAAGGCAGAGCAC-AAGTAGTCAT-AAGATACCCTTGGCACAT  140
      |||||||||||||||||||| |||||||||| ||||||||||||||||||
seq2  TCACGGGGAAGGCAGAGCACAAAGTAGTCATAAAGATACCCTTGGCACAT  150

seq1  GCGCAGATTATTT-GTTTACCACTTAGAACAC-AGCTGTCAGCGCCATCT  188
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  GCGCAGATTATTTGGTTTACCACTTAGAACACAAGCTGTCAGCGCCATCT  200

seq1  TGTAACGGCGAATGTGGGCGCGGCTCCCAACATTTTTCTTCAGCTCCAGC  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGGCGAATGTGGGCGCGGCTCCCAACATTTTTCTTCAGCTCCAGC  250

seq1  ACTCCCATTTTGTCTAAG-AAAGTTCATTTATACTGTATATTGGTTAAAA  287
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTCCCATTTTGTCTAAGAAAAGTTCATTTATACTGTATATTGGTTAAAA  300

seq1  TTCTGAATTTATCTGATTCTATAGCATTACTCAATTGTTTTCCTCTATAT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATTTATCTGATTCTATAGCATTACTCAATTGTTTTCCTCTATAT  350

seq1  CCTGTATACTGAAGTTAGAGTCAATGCTTGATTAGATTCAGCTTTTAAAT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATACTGAAGTTAGAGTCAATGCTTGATTAGATTCAGCTTTTAAAT  400

seq1  TGTTAAAATTTAACATTTTGTAAAATAAGCCATACTTTATAAATATTGCT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATTTAACATTTTGTAAAATAAGCCATACTTTATAAATATTGCT  450

seq1  GTGTAATCCAAATCTCATCAGGAGACAAACTAGATAATTGCCCTAGATTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCCAAATCTCATCAGGAGACAAACTAGATAATTGCCCTAGATTT  500

seq1  CCTGATCTAAAATTGATAAGTAACCCTTTCATAGTTCAACATCTGTCAAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTAAAATTGATAAGTAACCCTTTCATAGTTCAACATCTGTCAAT  550

seq1  GACTGTTGCTTAAGTATTTTGCTACTAAGTTCAAATTGTTTTCACCAGGC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTGCTTAAGTATTTTGCTACTAAGTTCAAATTGTTTTCACCAGGC  600

seq1  TAGTTTTTCTCTGCATAGCCCTAGCTGATCTGAACTCACTCTGCAGACCA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTCTCTGCATAGCCCTAGCTGATCTGAACTCACTCTGCAGACCA  650

seq1  GGCTGTCCTCATACTCAGAGATCCACCTGCCTCAGCCTACCGAATGGTGG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCTCATACTCAGAGATCCACCTGCCTCAGCCTACCGAATGGTGG  700

seq1  GGTTAAAGAAGTGCACAACCGGTGCCCAGGCCTCATCAGGTTAGTTATAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGAAGTGCACAACCGGTGCCCAGGCCTCATCAGGTTAGTTATAT  750

seq1  CGTTAATTATCATAGCCTGTTTGAGAAAGCTCCTTTTGCCATCCAGCTGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAATTATCATAGCCTGTTTGAGAAAGCTCCTTTTGCCATCCAGCTGA  800

seq1  CTTTATAGTTCTCTAAATTTAATAGATCCAGCGACATCTGAAACAGGGGG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGTTCTCTAAATTTAATAGATCCAGCGACATCTGAAACAGGGGG  850

seq1  ATCTATTCTGCGTGGAGAGATTATGAAAGGACTCACACTTAGGTAAAGTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCTGCGTGGAGAGATTATGAAAGGACTCACACTTAGGTAAAGTT  900

seq1  CTCACTCGAAGCCCATAAAACTGGTAGTTGTAGTTATGTCTTGCTTTGTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCGAAGCCCATAAAACTGGTAGTTGTAGTTATGTCTTGCTTTGTC  950

seq1  TCGTCCCGCTCCGTGTTTGGATTTAGGGAAAGGTGAGTGGGAGAGAGTTA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCCGCTCCGTGTTTGGATTTAGGGAAAGGTGAGTGGGAGAGAGTTA  1000

seq1  AAGTGCCTTGAGCCACTTCCTCTTACTTGCCTCAAACTCATGGAATTTTG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCTTGAGCCACTTCCTCTTACTTGCCTCAAACTCATGGAATTTTG  1050

seq1  GTAGGAATTC  1047
      ||||||||||
seq2  GTAGGAATTC  1060

seq1: chr1_74611812_74612731
seq2: B6Ng01-185P10.g_68_992

seq1  GAATTCTTCTGCCCATTTCCAGGCTACCGACATGTATCCTTGCTCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCCCATTTCCAGGCTACCGACATGTATCCTTGCTCTCCAG  50

seq1  AGATGGCACTAGCCTCAATCCAGCTTCCATCTTTGTATACACCTGCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCACTAGCCTCAATCCAGCTTCCATCTTTGTATACACCTGCATGC  100

seq1  AGGAAGACCTGGATATGGATGAGCCCTGAGGTGGGTGTTCCACAGCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACCTGGATATGGATGAGCCCTGAGGTGGGTGTTCCACAGCAAGA  150

seq1  GTGAATAGATATATTGGCTTTAGACGTCAAGGTACTAAATTGCCTTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAGATATATTGGCTTTAGACGTCAAGGTACTAAATTGCCTTGTCC  200

seq1  CCCACCCCTGTTCCCCTAAGACACCGTCTTACTATGTAGCCTAGGCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCTGTTCCCCTAAGACACCGTCTTACTATGTAGCCTAGGCTGTC  250

seq1  CTGGAACTCACTATATATAGACCAGGCTGCCCCCAAACTCATAGAGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCACTATATATAGACCAGGCTGCCCCCAAACTCATAGAGATCT  300

seq1  ATCTGCCTCTGACTCCAGAGTGCTGGCATTAAAGGCGTGAGCTGCTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTCTGACTCCAGAGTGCTGGCATTAAAGGCGTGAGCTGCTCTGA  350

seq1  CTGGCATACCTTGCCCTTATTAAGTAAATCTAATCTTTCTTTAGTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATACCTTGCCCTTATTAAGTAAATCTAATCTTTCTTTAGTCTTTC  400

seq1  CTGTCCTCCCTTTTGTGCACTCTTATGTGAGAGTTTACTCCTTATTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCCCTTTTGTGCACTCTTATGTGAGAGTTTACTCCTTATTCTTG  450

seq1  CCCTAGGCTTAATTCCATTCTCAGATTCTCTGTTAATCTTTCCTATCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGCTTAATTCCATTCTCAGATTCTCTGTTAATCTTTCCTATCATC  500

seq1  TCTGACTAGAAACACAGGGAGGGCCTTGAAGAACAATCTACAGATGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTAGAAACACAGGGAGGGCCTTGAAGAACAATCTACAGATGCACA  550

seq1  ATCCTTTCCAACCTACAACTTCCTCAAAATCCAGAGCCAGCCAAAGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCAACCTACAACTTCCTCAAAATCCAGAGCCAGCCAAAGGATC  600

seq1  AATGAAGGATCAAGGTTGCCAGGCAAAGGTTGAGGAAGAATGCCTGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGATCAAGGTTGCCAGGCAAAGGTTGAGGAAGAATGCCTGACTC  650

seq1  AAAACTGTGACTCTAGAGAACAATGCACAGCCCTGAGACCCCACTGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTGACTCTAGAGAACAATGCACAGCCCTGAGACCCCACTGGACT  700

seq1  GCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCGATTTGGCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCCTTAGCTGGTCTAAATAGAGCTTCTCTGTCCGATTTGGCTCTT  750

seq1  GTATGGTCTGTCATTGTTGGGCAAG-AAGGGGAAGTAGAGAAGGGGGGGC  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTATGGTCTGTCATTGTTGGGCAAGAAAGGGGAAGTAGAGAAGGGGGGGC  800

seq1  TTGCGGTGCAGAGAAACGACGTTTCCAAGGGCTCTCCTCTTTGTGCTGCG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGTGCAGAGAAACGACGTTTCCAAGGGCTCTCCTCTTTGTGCTGCG  850

seq1  TAAGAAGGGAA-TGGAAGAGAAG-CTTATAAGGAATGGGGCAAGAGCAGG  897
      | ||||||||| ||||||||||| ||||| ||||||||||||||||||||
seq2  TTAGAAGGGAATTGGAAGAGAAGCCTTAT-AGGAATGGGGCAAGAGCAGG  899

seq1  A-AGGG-TGTAATAG-CCTTCCCCGG  920
      | |||| |||||||| ||||||||||
seq2  ATAGGGTTGTAATAGCCCTTCCCCGG  925