BAC Information

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BAC

Clone NameB6Ng01-186E04
Chromosome1 (Build37)
Map Location 149,328,117 - 149,329,242
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186E04.bB6Ng01-186E04.g
ACCGA011150GA011151
length1,1141,041
definitionB6Ng01-186E04.b B6Ng01-186E04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattttccatatgtcatattctttggatttaatgttccaactgt
gaaatacagctgcaagaggggagtttcagattaggaagaaaaaaaccttt
gcataaggattgaagctgagccatcccaaaactagcaaaagcaaatgaaa
caaagaagcccacatctgcattggtggcacgatgaacagaggactcagta
gcattcaccaagtggcagtgggatgttctccaaaggaacacacatgtaca
cacttaagcgaccctcaaagtaagtcacttcactggtccctggggaggtt
tggagattgttctgaaaggattattgtgaaagaaaagaaatcattttgtt
attattgcaggctgaatttattttagcattggaaacagaaaggcaggtgt
aaggccaaaatgtctgttaaaattctgtagtcctgggggctactgaaata
gctaagtaggtgaagacattggacaccaagcctgaagacaggaactaaat
ccctggaacccatgaagaacaagaagagaactcactgactcctgcaagtt
gttctctgacgtccatatacataccaccccacccctccacacacacacac
attcaaaacaaatgttaaaaattaaaaaggacatctgtagtcccaaatgt
ggacagggcacactttatctttgagataagatgtatgttccatacatata
cgtcacattgatgcacatacctttctctttacatacacatcttagagatg
aaatgacatgcactgtaaggaatctgaataagagcaagaagcagtgacca
agcttctaacaatgagtcctcaagagctccactgggtttcctcacattgg
cttgtataaaaaggaaccaggattccttgaagaaatcaataatcacagtg
tgaagcctgctctacacaccccagaacagtttgttatactcaaagccaag
gaagacatcaagaattcatagtttggaactgaagagatggctcagtgttt
aagaacgtgtactgctgaggctagtacccagcaaacacatcagtgttgca
cactgccctgactctagctgcaggatctgagcccccttctgctcttacat
cctgactcacattc

gaattcctcatctttccaagacttttatcatgaatgggtgttggattgtg
gcaaatgctttctcagcatctaaagagatgatcgtgtggtttttgtcttt
gagtttgtttatatactggattatgttgatggatttccgtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttgaatcggctagcaagatctttattgaggatttttgca
tcgatattcataagggaaattggtttgaaattctctatctttgttgggtc
tttttgtgatttaggtatcagagtaattgtggcttcatagaatgagttgg
gtagagtaccttccatttctatttgtggaaaagtttgtgaagaactggaa
ttaggtcttctttgaaggtctgaaagaactctgcactaaacccatctagt
cctggttttttttttggtgggagactattaatgactgcctctatttcttt
aagggatataggactgttgagatcattaacctgatcttgatttagctttg
gtacctggtatctgtctagaaacttagttctatttcatcctggttttcca
gttttgttgagtatagccttttgtagcaggatctgatggcgttttggatt
tcttcaggatctgttgttatgtttcccttttcatttctgattttgttaat
taggatgcttttcctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaagaaccagctccttgattggttgattctttgaa
tagttctttcttgtttccacttggttgatttcaccctcgagtttgattat
tccctggcttctactcctctttgggtgaatttgtttccttttgttctaga
gcttttaagtgtgtttgtgaagctgcttatgtgtgctatcctctagtttc
tttttggatgcactcagagctatgagttttctttaggaattgcttttcat
tggggtctcttagttgggtatgctgtgggcttcatatctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149328117_149329242
seq2: B6Ng01-186E04.b_40_1153 (reverse)

seq1  GAATGTGAGTTCAGGGATTGTTAAGAGGCCAGAAGGGGGCTCCAGATCCC  50
      ||||||||| ||| ||||   ||||||  |||||||||||| |||||  |
seq2  GAATGTGAG-TCA-GGAT--GTAAGAG--CAGAAGGGGGCT-CAGAT--C  41

seq1  CTGCAGCTAGAGTTCAGGGCAGTTGTGCAACACCTGATGTGTTTGCTGGG  100
      |||||||||||| ||||||||| ||||||||| |||||||||||||||||
seq2  CTGCAGCTAGAG-TCAGGGCAG-TGTGCAACA-CTGATGTGTTTGCTGGG  88

seq1  TACTAGCCTCAGCAGTACACGTTCTTAAACACTGAGCCATCTCTTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCCTCAGCAGTACACGTTCTTAAACACTGAGCCATCTCTTCAGTT  138

seq1  CC-AACTATGAATTCTTTGATGTCTTCCTTGGCTTTGAGTATAACAAACT  199
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCAAACTATGAATTC-TTGATGTCTTCCTTGGCTTTGAGTATAACAAACT  187

seq1  GTTCTGGGGTGTGTAGAGCAGGCTTCACACTGTGATTATTGATTTCTTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGGTGTGTAGAGCAGGCTTCACACTGTGATTATTGATTTCTTCA  237

seq1  AGGAATCCTGGTTCCTTTTTATACAAGCCAATGTGAGGAAACCCAGTGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCCTGGTTCCTTTTTATACAAGCCAATGTGAGGAAACCCAGTGGA  287

seq1  GCTCTTGAGGACTCATTGTTAGAAGCTTGGTCACTGCTTCTTGCTCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGAGGACTCATTGTTAGAAGCTTGGTCACTGCTTCTTGCTCTTAT  337

seq1  TCAGATTCCTTACAGTGCATGTCATTTCATCTCTAAGATGTGTATGTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCCTTACAGTGCATGTCATTTCATCTCTAAGATGTGTATGTAAA  387

seq1  GAGAAAGGTATGTGCATCAATGTGACGTATATGTATGGAACATACATCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGTATGTGCATCAATGTGACGTATATGTATGGAACATACATCTT  437

seq1  ATCTCAAAGATAAAGTGTGCCCTGTCCACATTTGGGACTACAGATGTCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAGATAAAGTGTGCCCTGTCCACATTTGGGACTACAGATGTCCT  487

seq1  TTTTAATTTTTAACATTTGTTTTGAATGTGTGTGTGTGTGGAGGGGTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTTTTAACATTTGTTTTGAATGTGTGTGTGTGTGGAGGGGTGGG  537

seq1  GTGGTATGTATATGGACGTCAGAGAACAACTTGCAGGAGTCAGTGAGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATGTATATGGACGTCAGAGAACAACTTGCAGGAGTCAGTGAGTTC  587

seq1  TCTTCTTGTTCTTCATGGGTTCCAGGGATTTAGTTCCTGTCTTCAGGCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGTTCTTCATGGGTTCCAGGGATTTAGTTCCTGTCTTCAGGCTT  637

seq1  GGTGTCCAATGTCTTCACCTACTTAGCTATTTCAGTAGCCCCCAGGACTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCAATGTCTTCACCTACTTAGCTATTTCAGTAGCCCCCAGGACTA  687

seq1  CAGAATTTTAACAGACATTTTGGCCTTACACCTGCCTTTCTGTTTCCAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTAACAGACATTTTGGCCTTACACCTGCCTTTCTGTTTCCAAT  737

seq1  GCTAAAATAAATTCAGCCTGCAATAATAACAAAATGATTTCTTTTCTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATAAATTCAGCCTGCAATAATAACAAAATGATTTCTTTTCTTTC  787

seq1  ACAATAATCCTTTCAGAACAATCTCCAAACCTCCCCAGGGACCAGTGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATCCTTTCAGAACAATCTCCAAACCTCCCCAGGGACCAGTGAAG  837

seq1  TGACTTACTTTGAGGGTCGCTTAAGTGTGTACATGTGTGTTCCTTTGGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTACTTTGAGGGTCGCTTAAGTGTGTACATGTGTGTTCCTTTGGAG  887

seq1  AACATCCCACTGCCACTTGGTGAATGCTACTGAGTCCTCTGTTCATCGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCCACTGCCACTTGGTGAATGCTACTGAGTCCTCTGTTCATCGTG  937

seq1  CCACCAATGCAGATGTGGGCTTCTTTGTTTCATTTGCTTTTGCTAGTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAATGCAGATGTGGGCTTCTTTGTTTCATTTGCTTTTGCTAGTTTT  987

seq1  GGGATGGCTCAGCTTCAATCCTTATGCAAAGGTTTTTTTCTTCCTAATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGCTCAGCTTCAATCCTTATGCAAAGGTTTTTTTCTTCCTAATCT  1037

seq1  GAAACTCCCCTCTTGCAGCTGTATTTCACAGTTGGAACATTAAATCCAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCCCTCTTGCAGCTGTATTTCACAGTTGGAACATTAAATCCAAA  1087

seq1  GAATATGACATATGGAAAATGGAATTC  1126
      |||||||||||||||||||||||||||
seq2  GAATATGACATATGGAAAATGGAATTC  1114


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