BAC Information

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BAC

Clone NameB6Ng01-186H04
Chromosome1 (Build37)
Map Location 46,270,094 - 46,271,301
singlet/doubletsinglet
Overlap geneDnahc7b
Upstream geneCol3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225
Downstream geneLOC666855, Slc39a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186H04.bB6Ng01-186H04.g
ACCGA011289GA011290
length1,2001,036
definitionB6Ng01-186H04.b B6Ng01-186H04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacagagagagggaccattctatcaaacaagccttctataaatt
ccttctgaatgatactgactgactgtggtaacgtgtttatccaggacacc
atcagtggtctccagcctagcatgtgaggctccatgtagatcatgccaca
ccgggaaacctggaaggacacgtgtcggttagcatccaagtactgctcaa
aacgttccattgcttcacaggctcagtctgctcacatgacaggaaggggg
cagtcatcacttgaggtggatttaaggacattttccagaaacgatgtgtg
attgtaaatgggtacataccttctaacagatgaaggttggaggtcacgtg
atgtatatctgttcccaggcacctagtcatggatgcttttctgttttatg
tctctcaagaacaaagatcaccaagtcctttgctagcctcaccactgatt
cagtttggccatatgcagtgcctggcacaggggactgactacatcgagca
gctctaagaagcctcctgttgaccatcagatttcccataatgacagaaaa
tctacttcagttaatcactgggacagaatcaggtggggttaagcagggag
tcctgtgcacaagatctggtttcctactgggcattaagatgagttgggac
atctgtttcttacaaccctatagggacaaaaacttaattttatatcattc
cttgaccttagcttatgtgtgtgattttgtaaaatgatccaaaataaaag
aaaaataaacaaattactaaatctgccatggtatgtgagcagatagtgcc
tgctcgttcaggaccacagattgctttcacagtggaatgtataagtacat
tcattttagagtaaagctcccaagtaaaaataaacatttgcagaaattgt
gcaattcataggtagacgccaaacttgagaccttacagtggcaggagagg
cgacttccagatccatcgggttcaaaatcaggttcatttgtggtgacatt
gaataatctccccactcatcagacacaagctttctgttgtcatccagcac
agtgttcatgtctcaatcacacggcatcaactgggcccatcaaagaatac
cacttcttgtctggagcctacttgccgagtggataaggccaatgcactgg
agaaacgatcatatttccaatttgagaatattgaatttaattttaccatg


gaattctttgtttagctctgtacctcatttcttaattgggttatttgttt
tgttagagtttaacttcttgagttctttatatatttggttattagccctc
tatcagatatagggttagtgaagatcttttccctatctggaggttgctgt
tttgttctattaatagtgtcctttgccttaaaggagcttttcagtttcat
gaggtcccatttatcaattattgatcttagagcctgagccattattgttt
tgttcaagaaattctctcctgtagctaagtgttcaagacaatttcccact
ttctcttctattagattcagtctatcctgttttatgttgatgtccttgat
ccgcttggacttgagttttgtgcagtgtgataaatatgaatgtatttgca
ttcctctacatgcagacatccaggtctttgattctattctattgatcaac
ctgtctgtttctgtaccagtaccatgcctttaaaaaaatcattattgctc
tgtagtagagcttgaggtttggaatagtgattcttccagaagtgctttta
tttttcaggattgttttggctatcctgtgttttctgtttttccatatgaa
attgaaaattgctctgtcaaggtctgtaaaaaattgtgctggaatttggt
ggggattgcattgagaattgctctttgaatgtctgtaaaaaattgtgttg
gaatattgatgtggattgcactgaatctgtagatagacattttcactatg
ttaatcctactggatccatgagcatggggggatctttctaacttctgata
acttcttcaatatctttcttcagagacttgaagttcttgtcataaagatc
ttttccctacttggttagagttgcaccaaggtattttatgttatttgagg
ctactgtgaagggttttgtttcccaattgctttctctgcccatttatcat
ttggataagaagggcaatttgctcaagttgtttatcagctgtagttcttc
gggtagtatttggggaatggtctatggcttatatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46270094_46271301
seq2: B6Ng01-186H04.b_31_1230 (reverse)

seq1  CATGGTAAAA-TAAATTATAT-TTCTAAATTTTGAAATATTATTGATCTG  48
      |||||||||| ||||||  || |||| || || ||||||    ||||| |
seq2  CATGGTAAAATTAAATTCAATATTCTCAAATTGGAAATA----TGATC-G  45

seq1  TTTCCTCCACTGCATTTGCCCTTTATCCACTCTGCATGTAGACTCCAGAC  98
      ||| ||||| |||||| |||  |||||||||| ||| |||| ||||||||
seq2  TTT-CTCCAGTGCATTGGCC--TTATCCACTCGGCAAGTAGGCTCCAGAC  92

seq1  AGGAAGTGGTTAATCTTTGATGGG-CCAGTTGATGCCGTGTGGATTGAGA  147
      | ||||||| || ||||||||||| |||||||||||||||| ||||||| 
seq2  AAGAAGTGG-TATTCTTTGATGGGCCCAGTTGATGCCGTGT-GATTGAG-  139

seq1  ACATGAACACTGTGCTGGATGACAACAAGAAGC-TGTGTCTGATGAGTGG  196
      |||||||||||||||||||||||||||  |||| ||||||||||||||||
seq2  ACATGAACACTGTGCTGGATGACAACAGAAAGCTTGTGTCTGATGAGTGG  189

seq1  GGAGATTATTCAAATGTCACCACAAATGAACCTGATTTTTGAACCGATGG  246
      ||||||||||| |||||||||||||||||||||||||||  | |||||||
seq2  GGAGATTATTC-AATGTCACCACAAATGAACCTGATTTTGAACCCGATGG  238

seq1  ATCTGGAAGTCGCCTCTCCTGCCACTGTAAGGTCTCAAGTTTGGCGTCTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAAGTCGCCTCTCCTGCCACTGTAAGGTCTCAAGTTTGGCGTCTA  288

seq1  CCTATGAATTGCACAATTTCTGCAAATGTTTATTTTTACTTGGGAGCTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAATTGCACAATTTCTGCAAATGTTTATTTTTACTTGGGAGCTTT  338

seq1  ACTCTAAAATGAATGTACTTATACATTCCACTGTGAAAGCAATCTGTGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAAATGAATGTACTTATACATTCCACTGTGAAAGCAATCTGTGGT  388

seq1  CCTGAACGAGCAGGCACTATCTGCTCACATACCATGGCAGATTTAGTAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACGAGCAGGCACTATCTGCTCACATACCATGGCAGATTTAGTAAT  438

seq1  TTGTTTATTTTTCTTTTATTTTGGATCATTTTACAAAATCACACACATAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATTTTTCTTTTATTTTGGATCATTTTACAAAATCACACACATAA  488

seq1  GCTAAGGTCAAGGAATGATATAAAATTAAGTTTTTGTCCCTATAGGGTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGGTCAAGGAATGATATAAAATTAAGTTTTTGTCCCTATAGGGTTG  538

seq1  TAAGAAACAGATGTCCCAACTCATCTTAATGCCCAGTAGGAAACCAGATC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACAGATGTCCCAACTCATCTTAATGCCCAGTAGGAAACCAGATC  588

seq1  TTGTGCACAGGACTCCCTGCTTAACCCCACCTGATTCTGTCCCAGTGATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCACAGGACTCCCTGCTTAACCCCACCTGATTCTGTCCCAGTGATT  638

seq1  AACTGAAGTAGATTTTCTGTCATTATGGGAAATCTGATGGTCAACAGGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGTAGATTTTCTGTCATTATGGGAAATCTGATGGTCAACAGGAG  688

seq1  GCTTCTTAGAGCTGCTCGATGTAGTCAGTCCCCTGTGCCAGGCACTGCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTAGAGCTGCTCGATGTAGTCAGTCCCCTGTGCCAGGCACTGCAT  738

seq1  ATGGCCAAACTGAATCAGTGGTGAGGCTAGCAAAGGACTTGGTGATCTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAAACTGAATCAGTGGTGAGGCTAGCAAAGGACTTGGTGATCTTT  788

seq1  GTTCTTGAGAGACATAAAACAGAAAAGCATCCATGACTAGGTGCCTGGGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGAGAGACATAAAACAGAAAAGCATCCATGACTAGGTGCCTGGGA  838

seq1  ACAGATATACATCACGTGACCTCCAACCTTCATCTGTTAGAAGGTATGTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATACATCACGTGACCTCCAACCTTCATCTGTTAGAAGGTATGTA  888

seq1  CCCATTTACAATCACACATCGTTTCTGGAAAATGTCCTTAAATCCACCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTACAATCACACATCGTTTCTGGAAAATGTCCTTAAATCCACCTC  938

seq1  AAGTGATGACTGCCCCCTTCCTGTCATGTGAGCAGACTGAGCCTGTGAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGACTGCCCCCTTCCTGTCATGTGAGCAGACTGAGCCTGTGAAG  988

seq1  CAATGGAACGTTTTGAGCAGTACTTGGATGCTAACCGACACGTGTCCTTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAACGTTTTGAGCAGTACTTGGATGCTAACCGACACGTGTCCTTC  1038

seq1  CAGGTTTCCCGGTGTGGCATGATCTACATGGAGCCTCACATGCTAGGCTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCCCGGTGTGGCATGATCTACATGGAGCCTCACATGCTAGGCTG  1088

seq1  GAGACCACTGATGGTGTCCTGGATAAACACGTTACCACAGTCAGTCAGTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCACTGATGGTGTCCTGGATAAACACGTTACCACAGTCAGTCAGTA  1138

seq1  TCATTCAGAAGGAATTTATAGAAGGCTTGTTTGATAGAATGGTCCCTCTC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAGAAGGAATTTATAGAAGGCTTGTTTGATAGAATGGTCCCTCTC  1188

seq1  TCTGTTGAATTC  1208
      ||||||||||||
seq2  TCTGTTGAATTC  1200


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