BAC Information

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BAC

Clone NameB6Ng01-188D06
Chromosome1 (Build37)
Map Location 174,524,927 - 174,525,565
singlet/doubletsinglet
Overlap genenone
Upstream geneLy9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm, LOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8
Downstream geneFcrl6, Dusp23, LOC100040320, Crp, LOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408, GA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188D06.bB6Ng01-188D06.g
ACCGA012570GA012571
length639791
definitionB6Ng01-188D06.b B6Ng01-188D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcctgtacctttatcctttagggcacatgaacccatagagcc
caggtcctcaggaaaggcatgatcatcatgttcctctagatacataaccg
tttgcatttagctctgagtaggagaaaaaagatggttcatagctcagaat
tttggaggagacagatggggggcctgtgatgagtgctgtcaggtacctgt
ggcaggcagcagctgtcagttctctccagtgcccttcctcagtgtcagct
aggtctatcctggtttcccagtgagatttgccacccccaccccacccagg
atgtggggctttgggctggatgctaatattccacaaaccaaggatagagt
aggctaaagagcatgggcatcctcagagagctctgacctctgagctttgg
ggagggtttctttccttttttccttttcaattttcttagtaatggattgt
ttttgaaaaaaaaatccagtttattcaggaaaagggatttatttttattt
ttattttttgacaaggatattttcagctgtgtagatagacctgtggacac
agatagcagtaaggagagaaaagttcctgagtagtcaggagtgtgtgcat
atgtgtgtgtgtatgtgtatttgtgtgtgtgtgtatgtg
gaattctttgttcagttctgaaccccaatttttaatggggttattcgatt
ttctgaagtccaccttcttgagttttttatatatgttggatatttatgaa
attcctagccaaatggatggacctggagggcatcatcctaagtgaggtaa
cacattcacaaaggaactcacacaatatgtactcactgataagtggatat
tagccccaaagttaggattcccaagatataagatacaatttgctaaacac
atgaaactcaagaagaatgaagactgaagtgtggacactatgcccctcct
tagaattgggaacaaaacacccatggaaggagttacagaaacaaagtttg
gagctgagatgaaaggatggaccatgtagagactgccatatacagggatc
caccccataatcagcatccaaacgctgacaccattgcatacactagcaag
attttatcgaaaggacccagatgtagctgtctcttgtgagactatgccag
ggcctagcaaacacagaagtggatgctcacagtcagctaatggatggatc
acagggctcccaatggagaaagtacccaaggagctaaagggatctgcaac
cctataggtggaacaacattatgaactaaccagtaccccagagctcttga
ctctagctgcatatgtatcaaaagatggcctagtcggccatcactggaaa
gagtggcccattggacatgcaaactttatatgccccagtacaggggaacg
ccagggccaaaaagggggagtgggtgggtagaggagtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_174524927_174525565
seq2: B6Ng01-188D06.b_45_683

seq1  GAATTCTTTCCTGTACCTTTATCCTTTAGGGCACATGAACCCATAGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGTACCTTTATCCTTTAGGGCACATGAACCCATAGAGCC  50

seq1  CAGGTCCTCAGGAAAGGCATGATCATCATGTTCCTCTAGATACATAACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTCAGGAAAGGCATGATCATCATGTTCCTCTAGATACATAACCG  100

seq1  TTTGCATTTAGCTCTGAGTAGGAGAAAAAAGATGGTTCATAGCTCAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTAGCTCTGAGTAGGAGAAAAAAGATGGTTCATAGCTCAGAAT  150

seq1  TTTGGAGGAGACAGATGGGGGGCCTGTGATGAGTGCTGTCAGGTACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGAGACAGATGGGGGGCCTGTGATGAGTGCTGTCAGGTACCTGT  200

seq1  GGCAGGCAGCAGCTGTCAGTTCTCTCCAGTGCCCTTCCTCAGTGTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGCAGCTGTCAGTTCTCTCCAGTGCCCTTCCTCAGTGTCAGCT  250

seq1  AGGTCTATCCTGGTTTCCCAGTGAGATTTGCCACCCCCACCCCACCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTATCCTGGTTTCCCAGTGAGATTTGCCACCCCCACCCCACCCAGG  300

seq1  ATGTGGGGCTTTGGGCTGGATGCTAATATTCCACAAACCAAGGATAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGCTTTGGGCTGGATGCTAATATTCCACAAACCAAGGATAGAGT  350

seq1  AGGCTAAAGAGCATGGGCATCCTCAGAGAGCTCTGACCTCTGAGCTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAAGAGCATGGGCATCCTCAGAGAGCTCTGACCTCTGAGCTTTGG  400

seq1  GGAGGGTTTCTTTCCTTTTTTCCTTTTCAATTTTCTTAGTAATGGATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTTTCTTTCCTTTTTTCCTTTTCAATTTTCTTAGTAATGGATTGT  450

seq1  TTTTGAAAAAAAAATCCAGTTTATTCAGGAAAAGGGATTTATTTTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAAAAAATCCAGTTTATTCAGGAAAAGGGATTTATTTTTATTT  500

seq1  TTATTTTTTGACAAGGATATTTTCAGCTGTGTAGATAGACCTGTGGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTGACAAGGATATTTTCAGCTGTGTAGATAGACCTGTGGACAC  550

seq1  AGATAGCAGTAAGGAGAGAAAAGTTCCTGAGTAGTCAGGAGTGTGTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCAGTAAGGAGAGAAAAGTTCCTGAGTAGTCAGGAGTGTGTGCAT  600

seq1  ATGTGTGTGTGTATGTGTATTTGTGTGTGTGTGTATGTG  639
      |||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTATGTGTATTTGTGTGTGTGTGTATGTG  639