BAC Information

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BAC

Clone NameB6Ng01-188G07
Chromosome1 (Build37)
Map Location 114,623,108 - 114,623,827
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188G07.bB6Ng01-188G07.g
ACCGA012704GA012705
length1,222720
definitionB6Ng01-188G07.b B6Ng01-188G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgctcatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtttctggttttatgtgaagttctttga
tccatttagatttgaccttaatacaaggagataagtatggattgatttgc
attcttctacatgataacaacaagttgtgccagcaccatttgttgaaaat
gctgtctttcatccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcacgccgagatattttatattaat
ttgtgactattgagaaggtgttgtttcccttatttctttctcagccttgt
ttattctttgtgtaagaagaaagcccattgacttgtttgagttaattttt
atattcagctacttcacgaagctgttttatccagttaggagtcctctggg
tgactttttaggtcacttatatattaccatccaatcatctgcacagggaa
tttttggacttcctttcaatgggctacctggaactccctttgtgtggccc
atatgtcctcctgagctgttac

gaattcttgcagaagtgtcagtcacccccaaagactgctaaatttccata
aatatccaaccaatctagaattgatcagcatctcatttagggtttctaat
gtggcaatcaaacaccatgagcaaaaggcgagttcgtgattaaatttcac
tttccacttctcagtatgtcaccaaaagatgccaggacagaaattcaagc
aggaattcaagcatgacagtaaccttaaggcaggacctaaggcagaagcc
aaggaggtgaacagcttcgtagtttgtttcttgtgaaaatagcagtaatt
tattaccttccagattctctgggtatttattataggtctgatacttgggg
aagttaactattctgtattgaatttttcttgtctatactggcaagttttc
gtaattttgtgaggtatgctactaaaactgaagagttatcatcagtttta
catgtgagctacaaaaatgactcacctggaaagacatagccactggtgca
aacatctcagtaaaacaacaacaacaacaacaacaaaactctaccttctg
gatagtcttaagtttcaaccaatgtaggtatttgaataggaatggacttc
atagactcatgtgtttgaatatttggcaacaaggaatgacactattagga
ggtgtgtcatagtttggatatgcttggcccagggagtgggactatttaaa
gttgtggcattgttggagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114623108_114623827
seq2: B6Ng01-188G07.g_69_788 (reverse)

seq1  TACTCCAACAATGCCACAACTTTAAATAGTCCCACTCCCTGGGCCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAACAATGCCACAACTTTAAATAGTCCCACTCCCTGGGCCAAGCA  50

seq1  TATCCAAACTATGACACACCTCCTAATAGTGTCATTCCTTGTTGCCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAACTATGACACACCTCCTAATAGTGTCATTCCTTGTTGCCAAAT  100

seq1  ATTCAAACACATGAGTCTATGAAGTCCATTCCTATTCAAATACCTACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACACATGAGTCTATGAAGTCCATTCCTATTCAAATACCTACATT  150

seq1  GGTTGAAACTTAAGACTATCCAGAAGGTAGAGTTTTGTTGTTGTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAACTTAAGACTATCCAGAAGGTAGAGTTTTGTTGTTGTTGTTGT  200

seq1  TGTTGTTTTACTGAGATGTTTGCACCAGTGGCTATGTCTTTCCAGGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTTACTGAGATGTTTGCACCAGTGGCTATGTCTTTCCAGGTGAG  250

seq1  TCATTTTTGTAGCTCACATGTAAAACTGATGATAACTCTTCAGTTTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGTAGCTCACATGTAAAACTGATGATAACTCTTCAGTTTTAGT  300

seq1  AGCATACCTCACAAAATTACGAAAACTTGCCAGTATAGACAAGAAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACCTCACAAAATTACGAAAACTTGCCAGTATAGACAAGAAAAATT  350

seq1  CAATACAGAATAGTTAACTTCCCCAAGTATCAGACCTATAATAAATACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGAATAGTTAACTTCCCCAAGTATCAGACCTATAATAAATACCC  400

seq1  AGAGAATCTGGAAGGTAATAAATTACTGCTATTTTCACAAGAAACAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATCTGGAAGGTAATAAATTACTGCTATTTTCACAAGAAACAAACT  450

seq1  ACGAAGCTGTTCACCTCCTTGGCTTCTGCCTTAGGTCCTGCCTTAAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGCTGTTCACCTCCTTGGCTTCTGCCTTAGGTCCTGCCTTAAGGTT  500

seq1  ACTGTCATGCTTGAATTCCTGCTTGAATTTCTGTCCTGGCATCTTTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCATGCTTGAATTCCTGCTTGAATTTCTGTCCTGGCATCTTTTGGT  550

seq1  GACATACTGAGAAGTGGAAAGTGAAATTTAATCACGAACTCGCCTTTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTGAGAAGTGGAAAGTGAAATTTAATCACGAACTCGCCTTTTGC  600

seq1  TCATGGTGTTTGATTGCCACATTAGAAACCCTAAATGAGATGCTGATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGTTTGATTGCCACATTAGAAACCCTAAATGAGATGCTGATCAA  650

seq1  TTCTAGATTGGTTGGATATTTATGGAAATTTAGCAGTCTTTGGGGGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATTGGTTGGATATTTATGGAAATTTAGCAGTCTTTGGGGGTGAC  700

seq1  TGACACTTCTGCAAGAATTC  720
      ||||||||||||||||||||
seq2  TGACACTTCTGCAAGAATTC  720


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