BAC Information

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BAC

Clone NameB6Ng01-188I15
Chromosome1 (Build37)X (Build37)
Map Location 116,307,435 - 116,308,587104,960,025 - 104,960,061
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188I15.bB6Ng01-188I15.g
ACCGA012814GA012815
length1,155997
definitionB6Ng01-188I15.b B6Ng01-188I15.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(116,307,435 - 116,308,587)(104,960,025 - 104,960,061)
sequence
gaattcctggggactgaaggaccccatttcagaatgcaaggtggacaatg
cttgagaaatgatagcaatggttgtcctctgtcttccacacatatacatt
ttcatgcataattgtatacaactgaacacatacagagagagagagagaga
gagacagacagacagacagacagacagacagacagacagagacagagaca
cagagagagacagagagacagagaaacagagagagtgcatcactaatagc
tggaaatgtgctaggacctaaaatttgttctagttcattctagcttcttt
atgagaaaatatcctgtagatgctttaaaagcaatgcatttctctcactt
ctctcggctaagagttcaaaatcaaaggaccaaaggattcagtatccagc
taatatgagatggcagcttctggctatgtcctcactttattgagaagatg
aagtatcttttccaggctccctgtgaagagcagtattcctatttatgagg
tttatgacttagttttcaaaatgatttaagtcctgacaccagagattaat
ttcaggtattattcttcaggtgcttttcatcttgtcttttagagaaagtc
tctcattggccagtggctcacaaagtaagctaggcaggctgtctagtgag
acatgggaatttgcctatcttcactctttcaattgctggaatacaactga
ttaacaccagctgcagctatggttacaggggcttttgggatgaatttttg
ttctcatgtttgtacagaaatcattttacgatctgagctttctctacttg
ccctagctgtacttagataatgaacagatatctgtaacagatatacaaca
gtttgtttctaacttaagagtttgtggtctattctattcccagaattcac
ccactctcaagaatagattatatcatctagctggtgatgaagtcttgata
gacttgcaatccctctgcgtaccacccatattctagccgaaacagtgaga
tgtctaaatcctagtctgaattatgcttgagagaaatagaataatagctg
ggattcaggatatttgtccagtattcagagcgcaatacttgtttctgaag
aaaccccagtcagatgatttgcatgattctgtaactcaaggcttcctagt
gatct

gaattccataaacaatgagaagatgctcatacattctgatgccatgcaac
agttgtttgttgctgatcttgactggtttttattgttcttcattttatag
agataaacatgacaacaaacttctaatggttttctggcagattctggcct
ctaccactgcctactgccaattaggtagagccttggtgtttctgctagac
caggtcacagctatttattcatgattttgtttgtttgtttgtttggcatt
gaactagattgctggtatactgacaacagagagtgagaccactctctaag
gaattgcttttaaataggtctacaacgccgttttcatattaatgcacgtt
ttctcctactttggaaaacgggttagaagtgagactggtggatttaaaac
tctaatacagtagtttttggaaaaaaattataattctgtaggtggtgcca
aatgtggagcttaggctacatggataacttcacttctaatgtagtagagg
agttgacagggttttttttttccattttttattaggtatttagctcattt
acatttccaatgctataccaaaagtcccccatacccacccaccctcactc
ccctaaccgcccactccccctttttggccctggtgttcctctgtactggg
gcatataaagtttgcgtgtccaatgggcctctctttccagtgatggccga
ctaggccatcttttgatacatatgcagctagagtcaagagctccggggta
ctggttagttcataatgttgatccacctatagggttgcagatccctttaa
ctacttgggtactttctctagctcctccattgggagccctgtgatccatc
cattagctgactgtgagcatccacttctgtgtttgctagggcccggcata
gtctcaacaagagacagctacatcttgggtcttcgataaaatcttgctag
tgtatgcaatggtgtcagcgtttggatgctgatatggggtgggtcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116307435_116308587
seq2: B6Ng01-188I15.b_48_1202 (reverse)

seq1  AGATCACTA-GAAGCC-TGAGTTACAG-ATCATTGCAAATCATCTGACTG  47
      ||||||||| |||||| |||||||||| |||| |||||||||||||||||
seq2  AGATCACTAGGAAGCCTTGAGTTACAGAATCA-TGCAAATCATCTGACTG  49

seq1  GGGTTTTCTTCAAGAAC-AGTA-TGCGCTCTTAAATACTGAAC-AATATC  94
      ||| ||||||||  ||| |||| ||||||| | ||||||| || ||||||
seq2  GGG-TTTCTTCAGAAACAAGTATTGCGCTC-TGAATACTGGACAAATATC  97

seq1  TTGAATCCCAGCCTATTA-TCTATTTCTCTCAAGCATAATTCAGACTAGG  143
       |||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  CTGAATCCCAG-CTATTATTCTATTTCTCTCAAGCATAATTCAGACTAGG  146

seq1  ATTTTAGACATCTCACTGTTTCGGCTAGAATATGGGTGGTACGCAGAGGG  193
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTAGACATCTCACTGTTTCGGCTAGAATATGGGTGGTACGCAGAGGG  195

seq1  ATTGCAAGTCTATCAAGACTTCATCACCAGCTAGATGATATAATCTATTC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAGTCTATCAAGACTTCATCACCAGCTAGATGATATAATCTATTC  245

seq1  TTGAGAGTGGGTGAATTCTGGGAATAGAATAGACCACAAACTCTTAAGTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGTGGGTGAATTCTGGGAATAGAATAGACCACAAACTCTTAAGTT  295

seq1  AGAAACAAACTGTTGTATATCTGTTACAGATATCTGTTCATTATCTAAGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAACTGTTGTATATCTGTTACAGATATCTGTTCATTATCTAAGT  345

seq1  ACAGCTAGGGCAAGTAGAGAAAGCTCAGATCGTAAAATGATTTCTGTACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAGGGCAAGTAGAGAAAGCTCAGATCGTAAAATGATTTCTGTACA  395

seq1  AACATGAGAACAAAAATTCATCCCAAAAGCCCCTGTAACCATAGCTGCAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGAACAAAAATTCATCCCAAAAGCCCCTGTAACCATAGCTGCAG  445

seq1  CTGGTGTTAATCAGTTGTATTCCAGCAATTGAAAGAGTGAAGATAGGCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTAATCAGTTGTATTCCAGCAATTGAAAGAGTGAAGATAGGCAA  495

seq1  ATTCCCATGTCTCACTAGACAGCCTGCCTAGCTTACTTTGTGAGCCACTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATGTCTCACTAGACAGCCTGCCTAGCTTACTTTGTGAGCCACTG  545

seq1  GCCAATGAGAGACTTTCTCTAAAAGACAAGATGAAAAGCACCTGAAGAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGAGAGACTTTCTCTAAAAGACAAGATGAAAAGCACCTGAAGAAT  595

seq1  AATACCTGAAATTAATCTCTGGTGTCAGGACTTAAATCATTTTGAAAACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGAAATTAATCTCTGGTGTCAGGACTTAAATCATTTTGAAAACT  645

seq1  AAGTCATAAACCTCATAAATAGGAATACTGCTCTTCACAGGGAGCCTGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATAAACCTCATAAATAGGAATACTGCTCTTCACAGGGAGCCTGGA  695

seq1  AAAGATACTTCATCTTCTCAATAAAGTGAGGACATAGCCAGAAGCTGCCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACTTCATCTTCTCAATAAAGTGAGGACATAGCCAGAAGCTGCCA  745

seq1  TCTCATATTAGCTGGATACTGAATCCTTTGGTCCTTTGATTTTGAACTCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATTAGCTGGATACTGAATCCTTTGGTCCTTTGATTTTGAACTCT  795

seq1  TAGCCGAGAGAAGTGAGAGAAATGCATTGCTTTTAAAGCATCTACAGGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCGAGAGAAGTGAGAGAAATGCATTGCTTTTAAAGCATCTACAGGAT  845

seq1  ATTTTCTCATAAAGAAGCTAGAATGAACTAGAACAAATTTTAGGTCCTAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCATAAAGAAGCTAGAATGAACTAGAACAAATTTTAGGTCCTAG  895

seq1  CACATTTCCAGCTATTAGTGATGCACTCTCTCTGTTTCTCTGTCTCTCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCCAGCTATTAGTGATGCACTCTCTCTGTTTCTCTGTCTCTCTG  945

seq1  TCTCTCTCTGTGTCTCTGTCTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTGTCTCTGTCTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC  995

seq1  TGTCTGTCTCTCTCTCTCTCTCTCTCTGTATGTGTTCAGTTGTATACAAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTCTCTCTCTCTCTCTCTCTGTATGTGTTCAGTTGTATACAAT  1045

seq1  TATGCATGAAAATGTATATGTGTGGAAGACAGAGGACAACCATTGCTATC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATGAAAATGTATATGTGTGGAAGACAGAGGACAACCATTGCTATC  1095

seq1  ATTTCTCAAGCATTGTCCACCTTGCATTCTGAAATGGGGTCCTTCAGTCC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAAGCATTGTCCACCTTGCATTCTGAAATGGGGTCCTTCAGTCC  1145

seq1  CCAGGAATTC  1153
      ||||||||||
seq2  CCAGGAATTC  1155


seq1: chrX_104960025_104960061
seq2: B6Ng01-188I15.g_576_611 (reverse)

seq1  TGAGCTAAATACCTAATAAAAAAATGGAAAAAAAAAA  37
      ||||||||||||||||| |||||||||||||||||||
seq2  TGAGCTAAATACCTAAT-AAAAAATGGAAAAAAAAAA  36


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