BAC Information

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BAC

Clone NameB6Ng01-190B13
Chromosome1 (Build37)
Map Location 150,467,047 - 150,586,119
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190B13.bB6Ng01-190B13.g
ACCGA013939GA013940
length1,200625
definitionB6Ng01-190B13.b B6Ng01-190B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,584,634 - 150,586,119)(150,467,047 - 150,467,671)
sequence
gaattccatgagtttgtatgctaatccaacagaccttggataatacctga
ctcttatgctccataaagcaaaaaaagaaaaaagaagaaatatattttct
ttaaatcttagaggaaagtaggtcacatttagatgtagaatttccacttc
caattagccattaaattcattgaatacttggggttttattagcctgactg
aaataatgcttatttttaaaacaaattatttctgaattaattttctagtc
atgttctaaatagcataaatacaaaagactatgtgtactcaagaagagta
gttttatgaattaaaggatatcagtgattattgagttgttgaaaagataa
aatatcactttgatttcaagccatattggtaattttaatataattatatc
gtacttcatgtccaaaccttggggacccatgtcactgacttcctattctg
acagagattggttgctgaatgacttgtcaacttcataaattatacaaaag
cagggattcattttcattgtattgaaaggaaagataccttctcagtaagc
agtgattaccacttcttcaaaaagattggctgtgttcacttctctgcttg
tataaaacataaaacatctagagttaatcaccttcagtttttcatttcct
cttgagtatctacagatcatttcaatgtaagaggccaccaatggcctatt
tattaatcacctccctatcttatcttgtcacaacaaagctcatacacact
catcaactcttcatactagaaatactttagatacttgttttcactaccta
atcaaaattcattaggtgatgttgttaataccaccttccttaaatgtttc
tcaaggccattttctttcatgttgaatctaacactcctgctcacacactt
accacgatcctatcataaacttttgaagatattctccggtcttcctatgt
gtacattaccagcttgtcttcaggaaagtaagtcaataacttcaattttt
cttgcttctgtcttacaagattgcttacactttgagattaaatcaaactc
ttgaccatgatctaattctagactttattatttgtaatttactactaata
tgcaatctcctcctacctctttttggagaataatgaataccttttctagg
gtgtgtgaaattctgctccattcactggattggttcaatttggagggggt


gaattctttgttcagttctgagccccattttttaatggcgttatttgatt
ttctggagtccaccttctagagatctttatatatattggatattattccc
ctatctgatttaggataagtaaagatcctttcccaatcttttggtggtct
ttttgtcttgttgaccgtgtcttttgccttgcagtagctttgcaacttta
tgaggtcccatttattgattcacgatcttacagcacaagctattgctcac
agtatataaagaaatgcatttatttcagccaaattgagaagacagacaaa
aatccaatgatccccactccaagttcatattcagagtcctaatggaagag
atgcacataactaaaaagagccagcaactgtcagcaggtgtagaggccta
tatacagctggaaaggccactcagaagcagcttgtttatactcatgtcca
atggctttgcttctcattccatacctaagagaaaataaaatatatttttt
aaatattggtgattgttacttttaagtgtcaacttgacacaacctagaat
cacctgggaataaattcaggaggagctgtgggcattagattgacctgctg
aaatgggtgtgtgtggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150584634_150586119
seq2: B6Ng01-190B13.b_47_1246 (reverse)

seq1  ACCCCCTCCTGCTTCTATGAGGGTGTTCCCCCAAAAAAATCACCTACACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCCACCACCCCACCCTGGAGTTCTCCTAAACCAAGGCATCAAGCCTTC  100
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGGACCAAGGGCGTCTCCTCCCATTAATGTCAGACAAGGCCATCCTCT  150
                                                        
seq2  --------------------------------------------------  0

seq1  GCTACATATGCAGCTGGAGTCATGGATCCTTCCATGTGTACTTTCAGGTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGGTTTAGTGCCTAGAAGCTCTTGGGAGTCTGGTTGGTTGATATTGTT  250
                                                        
seq2  --------------------------------------------------  0

seq1  GTTCTTCCTATGGTGTTATAACCCCTTCAAATTGAAACCCATTCAGTTGA  300
                         | ||||| ||||||| |||| || ||| |||
seq2  -------------------ACCCCCTCCAAATTG-AACCAATCCAG-TGA  29

seq1  ATGGAGCAGATATCCACACA-CCTAGAAAATGTATTCAATTTAATCCTCC  349
      ||||||||||  | |||||| ||||||||| |||||||   | || ||||
seq2  ATGGAGCAGAATTTCACACACCCTAGAAAAGGTATTCA---TTATTCTCC  76

seq1  AAAAAGAGTAAGGA-GAGATTGCATATTTAGGTTAAGTA--AAATTACAA  396
      ||||||||  |||| |||||||||||||       ||||  |||||||||
seq2  AAAAAGAGGTAGGAGGAGATTGCATATT-------AGTAGTAAATTACAA  119

seq1  ATTAATTAAAGTCTAGGAATTTAGATCATGGTCAAGAGTTTTGATTTAAT  446
      ||  | ||||||||||  | |||||||||||||||||| |||||||||||
seq2  AT--AATAAAGTCTAG--AATTAGATCATGGTCAAGAG-TTTGATTTAAT  164

seq1  CTTCAAAGTGTTAAGCAATCTTTGTAAGACAGAAGCAAGAAAAATTGAAG  496
      | |||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  C-TCAAAGTG-TAAGCAATC-TTGTAAGACAGAAGCAAGAAAAATTGAAG  211

seq1  TTATTTGACTTACTTTCCTGAAGACAAGCTGGTAATGTACACATAGGAAG  546
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-TTGACTTACTTTCCTGAAGACAAGCTGGTAATGTACACATAGGAAG  260

seq1  ACCGGAGAATATCTTCAAAAGTTTATGATAGGATCGTGGTAAGTGTGTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGAATATCTTCAAAAGTTTATGATAGGATCGTGGTAAGTGTGTGA  310

seq1  GCAGGAGTGTTAGATTCAACATGAAAGAAAATGGCCTTGAGAAACATTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTGTTAGATTCAACATGAAAGAAAATGGCCTTGAGAAACATTTA  360

seq1  AGGAAGGTGGTATTAACAACATCACCTAATGAATTTTGATTAGGTAGTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGGTATTAACAACATCACCTAATGAATTTTGATTAGGTAGTGA  410

seq1  AAACAAGTATCTAAAGTATTTCTAGTATGAAGAGTTGATGAGTGTGTATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTATCTAAAGTATTTCTAGTATGAAGAGTTGATGAGTGTGTATG  460

seq1  AGCTTTGTTGTGACAAGATAAGATAGGGAGGTGATTAATAAATAGGCCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTTGTGACAAGATAAGATAGGGAGGTGATTAATAAATAGGCCAT  510

seq1  TGGTGGCCTCTTACATTGAAATGATCTGTAGATACTCAAGAGGAAATGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCCTCTTACATTGAAATGATCTGTAGATACTCAAGAGGAAATGAA  560

seq1  AAACTGAAGGTGATTAACTCTAGATGTTTTATGTTTTATACAAGCAGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGGTGATTAACTCTAGATGTTTTATGTTTTATACAAGCAGAGA  610

seq1  AGTGAACACAGCCAATCTTTTTGAAGAAGTGGTAATCACTGCTTACTGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACACAGCCAATCTTTTTGAAGAAGTGGTAATCACTGCTTACTGAG  660

seq1  AAGGTATCTTTCCTTTCAATACAATGAAAATGAATCCCTGCTTTTGTATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATCTTTCCTTTCAATACAATGAAAATGAATCCCTGCTTTTGTATA  710

seq1  ATTTATGAAGTTGACAAGTCATTCAGCAACCAATCTCTGTCAGAATAGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGAAGTTGACAAGTCATTCAGCAACCAATCTCTGTCAGAATAGGA  760

seq1  AGTCAGTGACATGGGTCCCCAAGGTTTGGACATGAAGTACGATATAATTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGACATGGGTCCCCAAGGTTTGGACATGAAGTACGATATAATTA  810

seq1  TATTAAAATTACCAATATGGCTTGAAATCAAAGTGATATTTTATCTTTTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTACCAATATGGCTTGAAATCAAAGTGATATTTTATCTTTTC  860

seq1  AACAACTCAATAATCACTGATATCCTTTAATTCATAAAACTACTCTTCTT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTCAATAATCACTGATATCCTTTAATTCATAAAACTACTCTTCTT  910

seq1  GAGTACACATAGTCTTTTGTATTTATGCTATTTAGAACATGACTAGAAAA  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACATAGTCTTTTGTATTTATGCTATTTAGAACATGACTAGAAAA  960

seq1  TTAATTCAGAAATAATTTGTTTTAAAAATAAGCATTATTTCAGTCAGGCT  1296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAGAAATAATTTGTTTTAAAAATAAGCATTATTTCAGTCAGGCT  1010

seq1  AATAAAACCCCAAGTATTCAATGAATTTAATGGCTAATTGGAAGTGGAAA  1346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCCCAAGTATTCAATGAATTTAATGGCTAATTGGAAGTGGAAA  1060

seq1  TTCTACATCTAAATGTGACCTACTTTCCTCTAAGATTTAAAGAAAATATA  1396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATCTAAATGTGACCTACTTTCCTCTAAGATTTAAAGAAAATATA  1110

seq1  TTTCTTCTTTTTTCTTTTTTTGCTTTATGGAGCATAAGAGTCAGGTATTA  1446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTTTTTCTTTTTTTGCTTTATGGAGCATAAGAGTCAGGTATTA  1160

seq1  TCCAAGGTCTGTTGGATTAGCATACAAACTCATGGAATTC  1486
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGTCTGTTGGATTAGCATACAAACTCATGGAATTC  1200


seq1: chr1_150467047_150467671
seq2: B6Ng01-190B13.g_63_687

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGCGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGCGTTATTTGATT  50

seq1  TTCTGGAGTCCACCTTCTAGAGATCTTTATATATATTGGATATTATTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTCCACCTTCTAGAGATCTTTATATATATTGGATATTATTCCC  100

seq1  CTATCTGATTTAGGATAAGTAAAGATCCTTTCCCAATCTTTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAAGTAAAGATCCTTTCCCAATCTTTTGGTGGTCT  150

seq1  TTTTGTCTTGTTGACCGTGTCTTTTGCCTTGCAGTAGCTTTGCAACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTGTTGACCGTGTCTTTTGCCTTGCAGTAGCTTTGCAACTTTA  200

seq1  TGAGGTCCCATTTATTGATTCACGATCTTACAGCACAAGCTATTGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTATTGATTCACGATCTTACAGCACAAGCTATTGCTCAC  250

seq1  AGTATATAAAGAAATGCATTTATTTCAGCCAAATTGAGAAGACAGACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATAAAGAAATGCATTTATTTCAGCCAAATTGAGAAGACAGACAAA  300

seq1  AATCCAATGATCCCCACTCCAAGTTCATATTCAGAGTCCTAATGGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATGATCCCCACTCCAAGTTCATATTCAGAGTCCTAATGGAAGAG  350

seq1  ATGCACATAACTAAAAAGAGCCAGCAACTGTCAGCAGGTGTAGAGGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATAACTAAAAAGAGCCAGCAACTGTCAGCAGGTGTAGAGGCCTA  400

seq1  TATACAGCTGGAAAGGCCACTCAGAAGCAGCTTGTTTATACTCATGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGCTGGAAAGGCCACTCAGAAGCAGCTTGTTTATACTCATGTCCA  450

seq1  ATGGCTTTGCTTCTCATTCCATACCTAAGAGAAAATAAAATATATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTGCTTCTCATTCCATACCTAAGAGAAAATAAAATATATTTTTT  500

seq1  AAATATTGGTGATTGTTACTTTTAAGTGTCAACTTGACACAACCTAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGGTGATTGTTACTTTTAAGTGTCAACTTGACACAACCTAGAAT  550

seq1  CACCTGGGAATAAATTCAGGAGGAGCTGTGGGCATTAGATTGACCTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGAATAAATTCAGGAGGAGCTGTGGGCATTAGATTGACCTGCTG  600

seq1  AAATGGGTGTGTGTGGGGGGGGGGG  625
      |||||||||||||||||||||||||
seq2  AAATGGGTGTGTGTGGGGGGGGGGG  625


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