BAC Information

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BAC

Clone NameB6Ng01-190O23
Chromosome1 (Build37)
Map Location 132,091,821 - 132,274,415
singlet/doubletdoublet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190O23.bB6Ng01-190O23.g
ACCGA014565GA014566
length870305
definitionB6Ng01-190O23.b B6Ng01-190O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,091,821 - 132,092,685)(132,274,111 - 132,274,415)
sequence
gaattccaaaatacatgatatttttaaaggatggtctctccaacctctgg
acccaggtgtgtttccattgtgaataagggatgcaaattttcttctggtg
agcttttactgtggccatctctccctgtggaaggaatggaaggagggaag
gaaagaaggacaaaggacatggtttagctcaaggcttctcagatttgaga
ggttcatgtggtcctatttaagcataaagcattttcatggatgcttatta
gcctgtcaatcacagtctaagtggcagtgagctaggaacaaggtagtgtc
ttgggaaaatgtcttttacttgtaaattgttgctgcttctacaactggat
ttgtgcatttaaataaaattaaaggagaaattggaataggatcttacaaa
cttacaggaaatgcccacagacctgttgtggttttaaaggcactggtgag
gtggtaagaaggcccagtttttgagagaagtgggcctttcaatactgtgg
cttaaaccacctgctttcaaacaagtggctctgtcttggttgctttacct
ataaaaatcagtgtagtgatccactttgcaggattgtcctgggcagggca
agcaaccagcctctagggctcacaaattagtgtttattatgagcaggaaa
gaaaatgtgctgaatgacatccaaacgcctaccaaacaccatcagccttg
ttggagagactaagaaactcaaacctgagggtcgccatggcagaggtgca
gcaactccgagtgcaggaggctgtggatgccatggtgaaaagtgtggaga
tagagaacaatcgggaagatgcaagggccttcgttgttccggtgcaacgc
caacttgctgttaagacact
tgattggataggtggggtggagctagagtgaggtgagtcggtgcaagttg
taataggagttttagcccttgccctaggaagaagccagtagtagtagagt
agttttagcccttgctgtgagtagaagtagagtaagagaagctgttgtaa
taggagtagtttagcccttgccctaagaagaagctgctggggaagagagc
tgtaaaagaaaaagcccgaagtaaagttgctgcgtgaacccaacttggtg
tctgtgtcgttggtgtcaccgcgggaaagaaggacctgtagcagctgtgg
gcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132091821_132092685
seq2: B6Ng01-190O23.b_46_915

seq1  GAATTCCAAAATACATGATATTTTTAAAGGATGGTCTCTCCAACCTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATACATGATATTTTTAAAGGATGGTCTCTCCAACCTCTGG  50

seq1  ACCCAGGTGTGTTTCCATTGTGAATAAGGGATGCAAATTTTCTTCTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTGTGTTTCCATTGTGAATAAGGGATGCAAATTTTCTTCTGGTG  100

seq1  AGCTTTTACTGTGGCCATCTCTCCCTGTGGAAGGAATGGAAGGAGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTACTGTGGCCATCTCTCCCTGTGGAAGGAATGGAAGGAGGGAAG  150

seq1  GAAAGAAGGACAAAGGACATGGTTTAGCTCAAGGCTTCTCAGATTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGACAAAGGACATGGTTTAGCTCAAGGCTTCTCAGATTTGAGA  200

seq1  GGTTCATGTGGTCCTATTTAAGCATAAAGCATTTTCATGGATGCTTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATGTGGTCCTATTTAAGCATAAAGCATTTTCATGGATGCTTATTA  250

seq1  GCCTGTCAATCACAGTCTAAGTGGCAGTGAGCTAGGAACAAGGTAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCAATCACAGTCTAAGTGGCAGTGAGCTAGGAACAAGGTAGTGTC  300

seq1  TTGGGAAAATGTCTTTTACTTGTAAATTGTTGCTGCTTCTACAACTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAATGTCTTTTACTTGTAAATTGTTGCTGCTTCTACAACTGGAT  350

seq1  TTGTGCATTTAAATAAAATTAAAGGAGAAATTGGAATAGGATCTTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATTTAAATAAAATTAAAGGAGAAATTGGAATAGGATCTTACAAA  400

seq1  CTTACAGGAAATGCCCACAGACCTGTTGTGGTTTTAAAGGCACTGGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGGAAATGCCCACAGACCTGTTGTGGTTTTAAAGGCACTGGTGAG  450

seq1  GTGGTAAGAAGGCCCAGTTTTTGAGAGAAGTGGGCCTTTCAATACTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAGAAGGCCCAGTTTTTGAGAGAAGTGGGCCTTTCAATACTGTGG  500

seq1  CTTAAACCACCTGCTTTCAAACAAGTGGCTCTGTCTTGGTTGCTTTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACCACCTGCTTTCAAACAAGTGGCTCTGTCTTGGTTGCTTTACCT  550

seq1  ATAAAAATCAGTGTAGTGATCCACTTTGCAGGATTGTCCTGGGCAGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATCAGTGTAGTGATCCACTTTGCAGGATTGTCCTGGGCAGGGCA  600

seq1  AGCAACCAGCCTCTAGGGCTCACAAATTAGTGTTTATTATGAGCAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAGCCTCTAGGGCTCACAAATTAGTGTTTATTATGAGCAGGAAA  650

seq1  GAAAATGTGCTGAATGACATCCAAACGCCTACCAAACACCATCAGCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTGCTGAATGACATCCAAACGCCTACCAAACACCATCAGCCTTG  700

seq1  TTGGAGAGACTAAGAAACTCAAACCTGAGGGTCGCCATGGCAGAGGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGACTAAGAAACTCAAACCTGAGGGTCGCCATGGCAGAGGTGCA  750

seq1  GCAACTCCGAGTGCAGGAGGCTGTGGATGCCATGGTGAAAAGTGTGGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCCGAGTGCAGGAGGCTGTGGATGCCATGGTGAAAAGTGTGGAGA  800

seq1  TAGAGAAC-ATCCGGAAGATGC-AGGGCC-TCG-TGTTCCGGTGCAACGC  846
      |||||||| ||| ||||||||| |||||| ||| ||||||||||||||||
seq2  TAGAGAACAATCGGGAAGATGCAAGGGCCTTCGTTGTTCCGGTGCAACGC  850

seq1  CAAC-TGCTGTGAAGACACT  865
      |||| |||||| ||||||||
seq2  CAACTTGCTGTTAAGACACT  870

seq1: chr1_132274111_132274415
seq2: B6Ng01-190O23.g_72_376 (reverse)

seq1  CCTGCCCACAGCTGCTACAGGTCCTTCTTTCCCGCGGTGACACCAACGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCACAGCTGCTACAGGTCCTTCTTTCCCGCGGTGACACCAACGAC  50

seq1  ACAGACACCAAGTTGGGTTCACGCAGCAACTTTACTTCGGGCTTTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACCAAGTTGGGTTCACGCAGCAACTTTACTTCGGGCTTTTTCTT  100

seq1  TTACAGCTCTCTTCCCCAGCAGCTTCTTCTTAGGGCAAGGGCTAAACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTCTCTTCCCCAGCAGCTTCTTCTTAGGGCAAGGGCTAAACTAC  150

seq1  TCCTATTACAACAGCTTCTCTTACTCTACTTCTACTCACAGCAAGGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTACAACAGCTTCTCTTACTCTACTTCTACTCACAGCAAGGGCTA  200

seq1  AAACTACTCTACTACTACTGGCTTCTTCCTAGGGCAAGGGCTAAAACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTCTACTACTACTGGCTTCTTCCTAGGGCAAGGGCTAAAACTCC  250

seq1  TATTACAACTTGCACCGACTCACCTCACTCTAGCTCCACCCCACCTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAACTTGCACCGACTCACCTCACTCTAGCTCCACCCCACCTATCC  300

seq1  AATCA  305
      |||||
seq2  AATCA  305