BAC Information

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BAC

Clone NameB6Ng01-191B03
Chromosome1 (Build37)
Map Location 130,966,421 - 131,081,191
singlet/doubletdoublet
Overlap genenone
Upstream geneZranb3, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191B03.bB6Ng01-191B03.g
ACCGA014665GA014666
length1,199407
definitionB6Ng01-191B03.b B6Ng01-191B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,079,990 - 131,081,191)(130,966,421 - 130,966,833)
sequence
gaattccagtcctgacttcctttggtgatgaacagcagtatggaagtgta
agccaaataaaccctttcctccccaacttgcttcttggtcatgatgtttg
tgcaggaatagaaaccctgactaagacaccaggtatgttccaatggtctc
tagtggtactatgagtcacagacatccacactgacccgtcattgaatgag
tacagacctggtcctcagtgacagcactgcctgggaattaagcatggtct
cagatagtagggctggcaagtcacaacaggctatttctccctatcctcaa
tctccagttccatctttcttcataattctcaaactattcctcttgtcttt
ctcatacatctatccaccacatacttgcacattgttgtggtttccattat
gggttgagtacatggctgtcagacctctgggtgacctcctctgcccacaa
cttttggcctggcagcagtgggcctttaggtatctacagcccacccatgt
ggcatggtggaaggtgggtctctgagtatactcctgttgtctacagcaca
tggtgaggtggcaagtgggtccctatgtgtctaaggcctgcccatgccat
actgtagcaggcatgcctctcaaaaggcttttaaaattcccctttaccca
tgatctaatgaaattgataactgtgatatttatagtgactcacaaatcag
ttttggggaaacatttccattattataaaattgagttggagatttttttt
aaaaaaaatctagatactcaatacatatttggatttgtaacttttttaaa
tcatcgtaacccaatcacaaaagaacagacatgatattcactcactcata
aatagatattagcccagaagctcagaatacccaagatacaggttcacaga
ccacatgaagctcaagaagaaggaagaccaaactgagggtactccagttc
ttttagaaggggaacaaaataacccatgggaggagttacagaagacaaag
tgtgaacagaactgaagaaaaagtcatcatccagaagactgcctcacaag
ggatccatcccacatacagtcaccaaccgagaccactattgtgaatgcca
aacaatctgctgtacgaagccctgatataagctgtctctgaagggggtct
tacatgccctgacaaatacgaagtatgttctcaagccatcattggcctg
atgatgaaccaaatgcaaaggcatcgaggggcattcaacaagaggtacag
gcaggtaagcagaggagaccaggtgtgagagagtcacaattgagaacttt
gccctgtgttcttattgtccctgatccctcctgctgactcatgctgattc
agctgaggctggctgttccttctaggttgtgccactgttctgatacccca
acactactgaactggactgctggtatatttaggaagtgtttgggagtgga
ttgagctgtgtattgaactgctgatttcctgacaacataggtgaaactgg
ctccaaacaaccatttctaaacaagtctacttcccctgtatccttttttt
cccctactacctctagcgggtggagggctttatttgaggtcaaagccttt
aagaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131079990_131081191
seq2: B6Ng01-191B03.b_43_1241 (reverse)

seq1  CAGGCCAATGGTTGGCTGAGAACATCTACTTCTGTATTTGTCAGGCACTG  50
      |||||||||| | |  ||||||||  |||||| ||||||||||||   ||
seq2  CAGGCCAATGATGGCTTGAGAACA--TACTTC-GTATTTGTCAGGGCATG  47

seq1  GTAGAGCCCCCTCAGGAGACAGC-TATATCA-GGCTTCTGTCAGCAAGAT  98
        ||| |||| ||| |||||||| ||||||| ||||||   |||| ||||
seq2  TAAGACCCCCTTCA-GAGACAGCTTATATCAGGGCTTCGTACAGC-AGAT  95

seq1  TTGTTGGCATCCACAATAGT-GTCTCGGTTTGGTGACTGTATGTGGGATG  147
      |  ||||||| ||||||||| ||||||| |||||||||||||||||||||
seq2  TGTTTGGCATTCACAATAGTGGTCTCGG-TTGGTGACTGTATGTGGGATG  144

seq1  GATCCCCTGGTGGGGCAGTC-TCTGGATGATGACTTTTTCTTCAGTTTCT  196
      ||| |||| ||| ||||||| |||||||||||||||||||||||| ||||
seq2  GAT-CCCTTGTGAGGCAGTCTTCTGGATGATGACTTTTTCTTCAG-TTCT  192

seq1  GTTTCACACTTTGTC-TCTGTAACTCCTCCCATGGG-TATTTTGTTCCCC  244
      | ||||||||||||| |||||||||||||||||||| ||||||||| |||
seq2  G-TTCACACTTTGTCTTCTGTAACTCCTCCCATGGGTTATTTTGTT-CCC  240

seq1  CTTCTAAAAGAACTGGAGTACCCTCAGTTTGGTCTTCCTTCTTCTTGAGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAAAGAACTGGAGTACCCTCAGTTTGGTCTTCCTTCTTCTTGAGC  290

seq1  TTCATGTGGTCTGTGAA-CTGTATCTTGGGTATTCTGAGCTTCTGGGCTA  343
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCATGTGGTCTGTGAACCTGTATCTTGGGTATTCTGAGCTTCTGGGCTA  340

seq1  ATATCTATTTATGAGTGAGTGAATATCATGTCTGTTCTTTTGTGATTGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATTTATGAGTGAGTGAATATCATGTCTGTTCTTTTGTGATTGGG  390

seq1  TTACGATGATTTAAAAAAGTTACAAATCCAAATATGTATTGAGTATCTAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGATGATTTAAAAAAGTTACAAATCCAAATATGTATTGAGTATCTAG  440

seq1  ATTTTTTTTAAAAAAAATCTCCAACTCAATTTTATAATAATGGAAATGTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAAAAAAAATCTCCAACTCAATTTTATAATAATGGAAATGTT  490

seq1  TCCCCAAAACTGATTTGTGAGTCACTATAAATATCACAGTTATCAATTTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAACTGATTTGTGAGTCACTATAAATATCACAGTTATCAATTTC  540

seq1  ATTAGATCATGGGTAAAGGGGAATTTTAAAAGCCTTTTGAGAGGCATGCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATCATGGGTAAAGGGGAATTTTAAAAGCCTTTTGAGAGGCATGCC  590

seq1  TGCTACAGTATGGCATGGGCAGGCCTTAGACACATAGGGACCCACTTGCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACAGTATGGCATGGGCAGGCCTTAGACACATAGGGACCCACTTGCC  640

seq1  ACCTCACCATGTGCTGTAGACAACAGGAGTATACTCAGAGACCCACCTTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACCATGTGCTGTAGACAACAGGAGTATACTCAGAGACCCACCTTC  690

seq1  CACCATGCCACATGGGTGGGCTGTAGATACCTAAAGGCCCACTGCTGCCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCCACATGGGTGGGCTGTAGATACCTAAAGGCCCACTGCTGCCA  740

seq1  GGCCAAAAGTTGTGGGCAGAGGAGGTCACCCAGAGGTCTGACAGCCATGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAAAGTTGTGGGCAGAGGAGGTCACCCAGAGGTCTGACAGCCATGT  790

seq1  ACTCAACCCATAATGGAAACCACAACAATGTGCAAGTATGTGGTGGATAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACCCATAATGGAAACCACAACAATGTGCAAGTATGTGGTGGATAG  840

seq1  ATGTATGAGAAAGACAAGAGGAATAGTTTGAGAATTATGAAGAAAGATGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGAGAAAGACAAGAGGAATAGTTTGAGAATTATGAAGAAAGATGG  890

seq1  AACTGGAGATTGAGGATAGGGAGAAATAGCCTGTTGTGACTTGCCAGCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAGATTGAGGATAGGGAGAAATAGCCTGTTGTGACTTGCCAGCCC  940

seq1  TACTATCTGAGACCATGCTTAATTCCCAGGCAGTGCTGTCACTGAGGACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTGAGACCATGCTTAATTCCCAGGCAGTGCTGTCACTGAGGACC  990

seq1  AGGTCTGTACTCATTCAATGACGGGTCAGTGTGGATGTCTGTGACTCATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTACTCATTCAATGACGGGTCAGTGTGGATGTCTGTGACTCATA  1040

seq1  GTACCACTAGAGACCATTGGAACATACCTGGTGTCTTAGTCAGGGTTTCT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACTAGAGACCATTGGAACATACCTGGTGTCTTAGTCAGGGTTTCT  1090

seq1  ATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTT  1140

seq1  TATTTGGCTTACACTTCCATACTGCTGTTCATCACCAAAGGAAGTCAGGA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGCTTACACTTCCATACTGCTGTTCATCACCAAAGGAAGTCAGGA  1190

seq1  CTGGAATTC  1202
      |||||||||
seq2  CTGGAATTC  1199

seq1: chr1_130966421_130966833
seq2: B6Ng01-191B03.g_67_479

seq1  GAATTCATGATGAACCAAATGCAAAGGCATCGAGGGGCATTCAACAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATGAACCAAATGCAAAGGCATCGAGGGGCATTCAACAAGAG  50

seq1  GTACAGGCAGGTAAGCAGAGGAGACCAGGTGTGAGAGAGTCACAATTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGCAGGTAAGCAGAGGAGACCAGGTGTGAGAGAGTCACAATTGAG  100

seq1  AACTTTGCCCTGTGTTCTTATTGTCCCTGATCCCTCCTGCTGACTCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGCCCTGTGTTCTTATTGTCCCTGATCCCTCCTGCTGACTCATGC  150

seq1  TGATTCAGCTGAGGCTGGCTGTTCCTTCTAGGTTGTGCCACTGTTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAGCTGAGGCTGGCTGTTCCTTCTAGGTTGTGCCACTGTTCTGAT  200

seq1  ACCCCAACACTACTGAACTGGACTGCTGGTATATTTAGGAAGTGTTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAACACTACTGAACTGGACTGCTGGTATATTTAGGAAGTGTTTGGG  250

seq1  AGTGGATTGAGCTGTGTATTGAACTGCTGATTTCCTGACAACATAGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATTGAGCTGTGTATTGAACTGCTGATTTCCTGACAACATAGGTGA  300

seq1  AACTGGCTCCAAACAACCATTTCTAAACAAGTCTACTTCCCCTGTATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTCCAAACAACCATTTCTAAACAAGTCTACTTCCCCTGTATCCT  350

seq1  TTTTTTCCCCTACTACCTCTAGCGGGTGGTGGGCTAGAAGGGAGGTCAAA  400
      ||||||||||||||||||||||||||||| |||||  |   |||||||||
seq2  TTTTTTCCCCTACTACCTCTAGCGGGTGGAGGGCTTTATTTGAGGTCAAA  400

seq1  GCATTTAAGAACC  413
      || ||||||||||
seq2  GCCTTTAAGAACC  413