BAC Information

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BAC

Clone NameB6Ng01-191C23
Chromosome1 (Build37)
Map Location 113,101,569 - 113,102,639
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191C23.bB6Ng01-191C23.g
ACCGA014746GA014747
length1101,071
definitionB6Ng01-191C23.b B6Ng01-191C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagagacgttgcacctaaccctcaagagactggaggccccagggagctta
atgtcaggcggggtgggggtagagggatcaccattgagatagggtggtat
ggggaggagg

gaattcaagattgcttgtgatacaagtgccctaaacttctaagacatctc
cctgaatcgtgaagcccagttttcagtatttaaatgaacgttttagattt
gttaattttaaatgaattttttgtttatatatacatgtcatatacaaaga
tacaattgcttaatatattatttaagttagatcatttcttatatttttat
actcttgaaatatgtataaaaagttcatttgctgtaactaaacaaatcct
taccctttattttaaaaccatgcatattaagaatccattttattttaatt
attcagtaatacactgttcactaccagtaatggaactcactacagctctt
caatccttactttttgagcactaattcccccttaaattaaatcgttattc
acaattattcttccttttaaaaagacaatttatatctccagccaaaatat
atgtgaaaaaccattttagcccttaacagatggacttatttcaagtcatc
gattttggaacgttaagaaaagaagcaggaaagtctttgtaatttttatt
gaaaagattcctattaaggttaggagccatggcaataaataatagtaacc
tttgagtagcacagcttttgtcagtaataaggccaaaaacttctcaaggg
attgaagaaaattctggtactaattacccttttttcagtatgaaatgtta
actgtctaagaattaatggaacaaatcctttcaactgatgtaatgtttca
agaggtatgccatttaaatgtctcagctttgcagtggtattcagcacatg
ttcactttattttaaggttccattttttttccttcaccttctgagaattg
taaggcttgcacattgaaccaaaggtctctttcccccttcttatagcctg
tgtttgatatgggctactttatccaagggcaaaattcctacattaaaatg
ttagtgaagtttgagatttgactgacacagcattattaaggcacctttat
ctttctattcacttcagatcgtcaatcttcactcaatgacactagatgaa
acatgcagacatgcatggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113101569_113102639
seq2: B6Ng01-191C23.g_66_1136

seq1  GAATTCAAGATTGCTTGTGATACAAGTGCCCTAAACTTCTAAGACATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATTGCTTGTGATACAAGTGCCCTAAACTTCTAAGACATCTC  50

seq1  CCTGAATCGTGAAGCCCAGTTTTCAGTATTTAAATGAACGTTTTAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCGTGAAGCCCAGTTTTCAGTATTTAAATGAACGTTTTAGATTT  100

seq1  GTTAATTTTAAATGAATTTTTTGTTTATATATACATGTCATATACAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTAAATGAATTTTTTGTTTATATATACATGTCATATACAAAGA  150

seq1  TACAATTGCTTAATATATTATTTAAGTTAGATCATTTCTTATATTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTGCTTAATATATTATTTAAGTTAGATCATTTCTTATATTTTTAT  200

seq1  ACTCTTGAAATATGTATAAAAAGTTCATTTGCTGTAACTAAACAAATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGAAATATGTATAAAAAGTTCATTTGCTGTAACTAAACAAATCCT  250

seq1  TACCCTTTATTTTAAAACCATGCATATTAAGAATCCATTTTATTTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTTATTTTAAAACCATGCATATTAAGAATCCATTTTATTTTAATT  300

seq1  ATTCAGTAATACACTGTTCACTACCAGTAATGGAACTCACTACAGCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAATACACTGTTCACTACCAGTAATGGAACTCACTACAGCTCTT  350

seq1  CAATCCTTACTTTTTGAGCACTAATTCCCCCTTAAATTAAATCGTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTTACTTTTTGAGCACTAATTCCCCCTTAAATTAAATCGTTATTC  400

seq1  ACAATTATTCTTCCTTTTAAAAAGACAATTTATATCTCCAGCCAAAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATTCTTCCTTTTAAAAAGACAATTTATATCTCCAGCCAAAATAT  450

seq1  ATGTGAAAAACCATTTTAGCCCTTAACAGATGGACTTATTTCAAGTCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAAACCATTTTAGCCCTTAACAGATGGACTTATTTCAAGTCATC  500

seq1  GATTTTGGAACGTTAAGAAAAGAAGCAGGAAAGTCTTTGTAATTTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGGAACGTTAAGAAAAGAAGCAGGAAAGTCTTTGTAATTTTTATT  550

seq1  GAAAAGATTCCTATTAAGGTTAGGAGCCATGGCAATAAATAATAGTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATTCCTATTAAGGTTAGGAGCCATGGCAATAAATAATAGTAACC  600

seq1  TTTGAGTAGCACAGCTTTTGTCAGTAATAAGGCCAAAAACTTCTCAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTAGCACAGCTTTTGTCAGTAATAAGGCCAAAAACTTCTCAAGGG  650

seq1  ATTGAAGAAAATTCTGGTACTAATTACCCTTTTTTCAGTATGAAATGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAAAATTCTGGTACTAATTACCCTTTTTTCAGTATGAAATGTTA  700

seq1  ACTGTCTAAGAATTAATGGAACAAATCCTTTCAACTGATGTAATGTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTAAGAATTAATGGAACAAATCCTTTCAACTGATGTAATGTTTCA  750

seq1  AGAGGTATGCCATTTAAATGTCTCAGCTTTGCAGTGGTATTCAGCACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATGCCATTTAAATGTCTCAGCTTTGCAGTGGTATTCAGCACATG  800

seq1  TTCACTTTATTTTAAGGTTCCA-TTTTTTTCCTTCACCTTCTGAGAATTG  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCACTTTATTTTAAGGTTCCATTTTTTTTCCTTCACCTTCTGAGAATTG  850

seq1  TAAGGCTTGCACATTGAACC-AAGGTCTC-TTCCCCCTTCTTATAGCCTG  897
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  TAAGGCTTGCACATTGAACCAAAGGTCTCTTTCCCCCTTCTTATAGCCTG  900

seq1  TGTTTGATATGGGCTAC-TTATCCAAGGGCAAAATTCCTACATTAAAATG  946
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTTTGATATGGGCTACTTTATCCAAGGGCAAAATTCCTACATTAAAATG  950

seq1  TTAGTGAAGTTTGAGATTTGACTGACACAGCATTA-TAAAGCACCTTTAT  995
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  TTAGTGAAGTTTGAGATTTGACTGACACAGCATTATTAAGGCACCTTTAT  1000

seq1  CTTTCTATTCACTTTCAGAACCGTCAATCTTCACTCAAATGGACACTAAG  1045
      |||||||||||| ||||| | |||||||||||||||||   |||||| ||
seq2  CTTTCTATTCAC-TTCAG-ATCGTCAATCTTCACTCAA--TGACACT-AG  1045

seq1  ATGAAACATGCAGACATGCATGGAAA  1071
      ||||||||||||||||||||||||||
seq2  ATGAAACATGCAGACATGCATGGAAA  1071


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