BAC Information

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BAC

Clone NameB6Ng01-191E18
Chromosome1 (Build37)
Map Location 148,790,344 - 148,907,694
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191E18.bB6Ng01-191E18.g
ACCGA014825GA014826
length1,0191,159
definitionB6Ng01-191E18.b B6Ng01-191E18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,906,690 - 148,907,694)(148,790,344 - 148,791,490)
sequence
gaattcatgctttaggaatgacctaaattatcactgaagttctgtttttg
atgacatgaatgtctttccagggaagcagtctttacctaaaaccttctga
tcctttagagacatactgcatgtgtctgtataagatattaatgtgatttt
tcattgtctgtgttctgaatttaaatatctttttcagtcagcacttctga
tatcatagcaggagacttatgcattatctgaaggaatgtctgtattaaaa
tgtcacaaaaatagaattgaaaggtaaccctggtgtggtcttttatttga
atgtaaagatattttggcaaaataccattttctttaattgcatggtcttg
gtaatgcttcggatacctaggatatgaaaacctttctgacaaattgtgac
ttacttttgggtaaatgtacagatttcttacagcaaaggctttcgatctc
tttttcagtctctcatttaatttatttttattttttccaccttttttttc
ttttttaatatttttattaggtattttcctcatttacatttccaatgcta
tcccaaaagtcccccatactctccccccaccactctcctacccacccacc
cccactttttggccctggcatttcccctgtactggggcatataaagtttg
catgaccaatgggcctctctttccagtgatggccgactaggccatctttt
gatagatatgcagctagagttcaagagctccggggtactggttagttcat
attgtttgttccatctatagggttgcagttccctttagctccttgggtac
tttctctagctcctccattgagggccctgtgatccatccaaatagctgac
tgatgagcacatccaactttctgtgtttgctcatttcaatttattattca
tctttcttttagcaacattaaaggaacattatagcgtatttgagggaaaa
tgctaagagcatttggattatcagacattttaatttatgagcctcctaaa
ttttctacatttcttataa

gaattcaatcaaaacaaaagaaagacagaacaaattaaataccaattttg
tatgttgaaagaataatggagtggaatcaaatgctaatgttcaagtaagt
aaatttatagtcaaaattacactcctttgaaataatttgtagatgttgag
aattaataatttttgctcattcatattataatttaatgcagagaaatgta
atccataaaaaatgatcagctatgtgtatatactatattatatgagagaa
cttgttactggaaaatacttttagtatttagaaaatatgtaatatcatct
cataattggagggtccacactgaatgatgccaattcatatatctgcaaca
agattttaaaagcatactatcatttcttcaaagaatgtgtgttaaagaaa
tattagaactttgataatgaaacaaaatgaattgttatcctatatgacag
ctgtcaattaaagaaatggaagatgattttcttgcaaaattatgtggagg
tttctggctaatgtgaagattcttcacaaatagtccacagcttagtttat
acaccaggctatttaaattctgagcatccattaatcctcagtacttgaag
atctttggatcaaagtggcaaaagttcagatcttacagatgaacacatat
atgttaaacttctgagccataaggtaaccataaagttgaaaatagtccag
aaaatcaccaaacaaccctcatttctgataaaagattatgtataatctag
tgattctcctatactgtcttgatatagtaagagaatactctatgcagtta
aaataatggacagattatacacttcacaaagttttctatatgtttatttt
cttcttctcttcctgtaaaaagagtgtttaacaagaaacgatgtgtgtga
caacttacatgggtccactgattccctttatctatcattacacttttctg
agccatacaatgtagtggtagttgattacaggcttaataaagcatgcata
aaggcctttggggtttgataccctgcatgattatatactggttaggtgaa
cacatacctgtaattctggccatttggtagcctggacgatgtaacatctt
tttctcaaatcagcaaataaaacaacactactaattagaaaagcttacat
ataccaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148906690_148907694
seq2: B6Ng01-191E18.b_44_1062 (reverse)

seq1  TTATAAG-AATGTAG-AAATTTAGGA-GCTCTATAATTAAAATGTCTGAT  47
      ||||||| ||||||| |||||||||| ||||   ||||||||||||||||
seq2  TTATAAGAAATGTAGAAAATTTAGGAGGCTCATAAATTAAAATGTCTGAT  50

seq1  AATCCAAATGCTCTTAGCA-TTTCCCTC-AATATGCTAT-ATGTTCCTTT  94
      ||||||||||||||||||| |||||||| |||| ||||| ||||||||||
seq2  AATCCAAATGCTCTTAGCATTTTCCCTCAAATACGCTATAATGTTCCTTT  100

seq1  AATTTTGCTAAAAGAAAAGATGAATTAATAAATT-AAATGAGCAAACACA  143
      ||| |||||||||| ||||||||| ||||||||| |||||||||||||||
seq2  AATGTTGCTAAAAG-AAAGATGAA-TAATAAATTGAAATGAGCAAACACA  148

seq1  GAA--GTGGA--TGCTCA-CAGTCAGCTA-TTGGATGGATCACAGGGCCC  187
      |||   ||||  |||||| |||||||||| ||||||||||||||||||||
seq2  GAAAGTTGGATGTGCTCATCAGTCAGCTATTTGGATGGATCACAGGGCCC  198

seq1  TCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAAC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAAC  248

seq1  CCTATAGATGGAAC-AACAATATGAACTAACCAGTACCCCGGAGCTCTTG  286
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTATAGATGGAACAAACAATATGAACTAACCAGTACCCCGGAGCTCTTG  298

seq1  -ACTCTAGCTGCATATCTATCAAAAGATGGCCTAGTCGGCCATCACTGGA  335
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGCTGCATATCTATCAAAAGATGGCCTAGTCGGCCATCACTGGA  348

seq1  AAGAGAGGCCCATTGGTCATGCAAACTTTATATGCCCCAGTACAGGGG-A  384
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAGAGAGGCCCATTGGTCATGCAAACTTTATATGCCCCAGTACAGGGGAA  398

seq1  ATGCCAGGGCCAAAAAGTGGGGGTGGGTGGGTAGGAGAGTGGTGGGGGGA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGGGCCAAAAAGTGGGGGTGGGTGGGTAGGAGAGTGGTGGGGGGA  448

seq1  GAGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATA  498

seq1  CCTAATAAAAATATTAAAAAAGAAAAAAAAGGTGGAAAAAATAAAAATAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAAAATATTAAAAAAGAAAAAAAAGGTGGAAAAAATAAAAATAA  548

seq1  ATTAAATGAGAGACTGAAAAAGAGATCGAAAGCCTTTGCTGTAAGAAATC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGAGAGACTGAAAAAGAGATCGAAAGCCTTTGCTGTAAGAAATC  598

seq1  TGTACATTTACCCAAAAGTAAGTCACAATTTGTCAGAAAGGTTTTCATAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTACCCAAAAGTAAGTCACAATTTGTCAGAAAGGTTTTCATAT  648

seq1  CCTAGGTATCCGAAGCATTACCAAGACCATGCAATTAAAGAAAATGGTAT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTATCCGAAGCATTACCAAGACCATGCAATTAAAGAAAATGGTAT  698

seq1  TTTGCCAAAATATCTTTACATTCAAATAAAAGACCACACCAGGGTTACCT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAAATATCTTTACATTCAAATAAAAGACCACACCAGGGTTACCT  748

seq1  TTCAATTCTATTTTTGTGACATTTTAATACAGACATTCCTTCAGATAATG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTATTTTTGTGACATTTTAATACAGACATTCCTTCAGATAATG  798

seq1  CATAAGTCTCCTGCTATGATATCAGAAGTGCTGACTGAAAAAGATATTTA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTCTCCTGCTATGATATCAGAAGTGCTGACTGAAAAAGATATTTA  848

seq1  AATTCAGAACACAGACAATGAAAAATCACATTAATATCTTATACAGACAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGAACACAGACAATGAAAAATCACATTAATATCTTATACAGACAC  898

seq1  ATGCAGTATGTCTCTAAAGGATCAGAAGGTTTTAGGTAAAGACTGCTTCC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTATGTCTCTAAAGGATCAGAAGGTTTTAGGTAAAGACTGCTTCC  948

seq1  CTGGAAAGACATTCATGTCATCAAAAACAGAACTTCAGTGATAATTTAGG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGACATTCATGTCATCAAAAACAGAACTTCAGTGATAATTTAGG  998

seq1  TCATTCCTAAAGCATGAATTC  1005
      |||||||||||||||||||||
seq2  TCATTCCTAAAGCATGAATTC  1019


seq1: chr1_148790344_148791490
seq2: B6Ng01-191E18.g_64_1222

seq1  GAATTCAATCAAAACAAAAGAAAGACAGAACAAATTAAATACCAATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCAAAACAAAAGAAAGACAGAACAAATTAAATACCAATTTTG  50

seq1  TATGTTGAAAGAATAATGGAGTGGAATCAAATGCTAATGTTCAAGTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGAAAGAATAATGGAGTGGAATCAAATGCTAATGTTCAAGTAAGT  100

seq1  AAATTTATAGTCAAAATTACACTCCTTTGAAATAATTTGTAGATGTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATAGTCAAAATTACACTCCTTTGAAATAATTTGTAGATGTTGAG  150

seq1  AATTAATAATTTTTGCTCATTCATATTATAATTTAATGCAGAGAAATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAATTTTTGCTCATTCATATTATAATTTAATGCAGAGAAATGTA  200

seq1  ATCCATAAAAAATGATCAGCTATGTGTATATACTATATTATATGAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAAAAAATGATCAGCTATGTGTATATACTATATTATATGAGAGAA  250

seq1  CTTGTTACTGGAAAATACTTTTAGTATTTAGAAAATATGTAATATCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTACTGGAAAATACTTTTAGTATTTAGAAAATATGTAATATCATCT  300

seq1  CATAATTGGAGGGTCCACACTGAATGATGCCAATTCATATATCTGCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGGAGGGTCCACACTGAATGATGCCAATTCATATATCTGCAACA  350

seq1  AGATTTTAAAAGCATACTATCATTTCTTCAAAGAATGTGTGTTAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTAAAAGCATACTATCATTTCTTCAAAGAATGTGTGTTAAAGAAA  400

seq1  TATTAGAACTTTGATAATGAAACAAAATGAATTGTTATCCTATATGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAACTTTGATAATGAAACAAAATGAATTGTTATCCTATATGACAG  450

seq1  CTGTCAATTAAAGAAATGGAAGATGATTTTCTTGCAAAATTATGTGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATTAAAGAAATGGAAGATGATTTTCTTGCAAAATTATGTGGAGG  500

seq1  TTTCTGGCTAATGTGAAGATTCTTCACAAATAGTCCACAGCTTAGTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGCTAATGTGAAGATTCTTCACAAATAGTCCACAGCTTAGTTTAT  550

seq1  ACACCAGGCTATTTAAATTCTGAGCATCCATTAATCCTCAGTACTTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGGCTATTTAAATTCTGAGCATCCATTAATCCTCAGTACTTGAAG  600

seq1  ATCTTTGGATCAAAGTGGCAAAAGTTCAGATCTTACAGATGAACACATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGATCAAAGTGGCAAAAGTTCAGATCTTACAGATGAACACATAT  650

seq1  ATGTTAAACTTCTGAGCCATAAGGTAACCATAAAGTTGAAAATAGTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAACTTCTGAGCCATAAGGTAACCATAAAGTTGAAAATAGTCCAG  700

seq1  AAAATCACCAAACAACCCTCATTTCTGATAAAAGATTATGTATAATCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACCAAACAACCCTCATTTCTGATAAAAGATTATGTATAATCTAG  750

seq1  TGATTCTCCTATACTGTCTTGATATAGTAAGAGAATACTCTATGCAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTCCTATACTGTCTTGATATAGTAAGAGAATACTCTATGCAGTTA  800

seq1  AAATAATGGACAGATTATACACTTCACAAAGTTTTCTATATGTTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGACAGATTATACACTTCACAAAGTTTTCTATATGTTTATTTT  850

seq1  CTTCTTCTCTTCCTGTAAAAAGAGTGTTTAACAAGAAACGATGTGTGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCTTCCTGTAAAAAGAGTGTTTAACAAGAAACGATGTGTGTGA  900

seq1  CAACTTACAT-GGTCCACTGATTCCCTTTATCTATCATTACAC-TTTCTG  948
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  CAACTTACATGGGTCCACTGATTCCCTTTATCTATCATTACACTTTTCTG  950

seq1  AGCCATACAATGTAGT-GTAGTTGATTACAGGCTT-ATAAAGCATGCAT-  995
      |||||||||||||||| |||||||||||||||||| ||||||||||||| 
seq2  AGCCATACAATGTAGTGGTAGTTGATTACAGGCTTAATAAAGCATGCATA  1000

seq1  AAGGC--TTTGGGTTTGATA-CCTGCATGA-TATATACTGGT--AGTG-A  1038
      |||||  || |||||||||| ||||||||| |||||||||||   ||| |
seq2  AAGGCCTTTGGGGTTTGATACCCTGCATGATTATATACTGGTTAGGTGAA  1050

seq1  CACATACCTGTAATTCTGG-CATTTGGTAGCCTGGACGATGTAACATC-T  1086
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  CACATACCTGTAATTCTGGCCATTTGGTAGCCTGGACGATGTAACATCTT  1100

seq1  TTTCTCAAAATCAAGCAAATAAAACAACAACCAC--AATAGAAAAGCATA  1134
      |||||| ||||| ||||||||||||||| || ||  | ||||||||| ||
seq2  TTTCTC-AAATC-AGCAAATAAAACAAC-ACTACTAATTAGAAAAGCTTA  1147

seq1  CATATACACAATT  1147
      ||||||| |||||
seq2  CATATAC-CAATT  1159


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