BAC Information

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BAC

Clone NameB6Ng01-191I01
Chromosome1 (Build37)
Map Location 151,747,569 - 151,854,585
singlet/doubletdoublet
Overlap genePla2g4a
Upstream geneLOC100042792, LOC435647, LOC100042813
Downstream genePtgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191I01.bB6Ng01-191I01.g
ACCGA014977GA014978
length1,1601,148
definitionB6Ng01-191I01.b B6Ng01-191I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,853,416 - 151,854,585)(151,747,569 - 151,748,780)
sequence
gaattctcaaaggtgtgtctttcccagttttagctttttatactaagaat
cttgaatgtaatcacaaagagaagttggaatggaacaaccattctggtaa
gcaaacaggactctagccttggtttctctgattcctgtaaggagcctgtg
tctttttagaggacttgttgctgtccccagaggaaaaaaaaataaacatt
aagaaaattggaagtggtcctgtcattggctcatgtgcaaacacagtggt
ggactacttctgttaacatcctgctttgaaagggagctggggaagccgaa
gtttatcttttcctgacaactttctgcttctggcaggaccaccccactga
ccatgccctcaggacctccatcttcttgtatcaataaacaggcctttctg
acttcatcgtccaatctaagcatagcttctactcagctttgccaactcat
ctacacagcatttatacaccatcatttcttctcatgtccttcgaggcaaa
ttcaaagactgcttctcttactctaaagtttattgcaatttaccagcttt
gtctaccttcccaggaagcttggaggcctacgtctaccaaaaagttctcc
attcatgcaaatctctgcacatataagctgcttctgctgttcttattcat
tctcgggcagttcaactcctgtttcatgtacatcttcatagatgaactat
accttgcatagctgcttcttcaggaagagagtccttacatagtattttgt
ccgtgactacaaggtctcactacatagtccaggctgtcttctagatcata
attaatggaattacaggcacacatcaccatgcccagccactaaccagtga
gtctggcagtgttttagtattaaagtccagttacaaattaattgtagttc
tagatatataattttcaaaactaatactaaaagtagcatctacatcacct
ccccaaatatttgtaattaatgtataggagtacactgctgcattaaacat
aaatattagtgagataattaacaaagtccttaatatatacaagactcaat
tattgttagatattctgtgcctccaatttcccgatctgtgcagtgttctc
tagtcttttttttttttttcaaatcggagccaaaggagataggctcagca
ttcctctttt

gaattcttttttcattaataaattaataaataactaccttattgtgataa
ttctgaaagtacaaaaataataaaattaatcaaacattatttcttctgat
cttttactgatttggacctaattatttgagacagaattatttccttagag
atgcttaatttacagcaatatatcgacagtaaacgtgtccttacaatagt
gatagtaaatatatgttccaacaaagtaggacacaaggttgaaatacttc
gaattttgcaaccaccttatcatcccaaatgctaacagactctccagtgg
agtccaaaattgatgcttcatttcactgctattatttggaacaacaaaat
atcaatacctcatagtatttatcatttcaatcaaggtgtatatatttaac
aataagagatcatttagaacaattgtctatggatatggctaaatgatagt
gcttgcctagcctgtgtaagggctggttctaagccacagcaccacaaaga
ataaccagagaggacaaagtaaaggcaggaagcaaaagagcaaacaagat
gaaagataaagttgataagaaaaaatatatttccaaacattaagcccaac
ttttgaaaataaatcaatgcacatggaatatggagtgggacatgattctg
ctgctacttacttggttgaaaataaaagggacttctttcttctctcccac
tttcattgaagatacagggaatgtagctgtgcctagggtttcatccatga
cgtagttggcatccatcagtgtgatctacaaagcaaagcagaacgtaaga
tgtttctcggaatctttagaagcactctctaaaatgtctgtcacagagga
caagagtgatggtacatcagttaagggcactagatattcttccaaaagga
cctaggctcaattccccacacccatgtggcatgtcacactgtctgtacct
tccagttctaaaggaatctaatgttcttgttcttgcttacatgggcattg
catgcacatagtgtacggacatataccatccaaacactcaacacattata
tcaaaaaataggtattttttgaaagactgtttatcataataaagtttcta
gcaagttaagtaccacaaaaccttaatccagcatcaaggtcagccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151853416_151854585
seq2: B6Ng01-191I01.b_43_1202 (reverse)

seq1  AAAAGAGGAATGCTGAGCACTTACTCCTTTGGCTCGTATTAAAAAAAAAA  50
      |||||||||||||||||| ||  ||||||||||||  |||  ||||||||
seq2  AAAAGAGGAATGCTGAGC-CTATCTCCTTTGGCTCCGATTTGAAAAAAAA  49

seq1  AAAAAAGACTAGAG-ACACTGCACAAGGATTGGGGAATTTGGAGGCCACA  99
      |||||||||||||| ||||||||||  || | ||||| ||||||| ||||
seq2  AAAAAAGACTAGAGAACACTGCACA--GA-TCGGGAAATTGGAGG-CACA  95

seq1  GAATATCTTAACAAT-ATTGAGTCTTTGTATATATTAAGGACTTTGTTAA  148
      ||||||| ||||||| |||||||| |||||||||||||||||||||||||
seq2  GAATATC-TAACAATAATTGAGTC-TTGTATATATTAAGGACTTTGTTAA  143

seq1  TTTATCTCACTAATATTTTATTGTTTTAATGCAGCAGTGTTACTCCTATA  198
       |||||||||||||| |||||   ||||||||||||||| ||||||||||
seq2  -TTATCTCACTAATA-TTTAT--GTTTAATGCAGCAGTG-TACTCCTATA  188

seq1  CATTAATTACAAATATTTGGGGAGGTGATGTAGATGCTACTTTTAGTATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTACAAATATTTGGGGAGGTGATGTAGATGCTACTTTTAGTATT  238

seq1  AGTTTTGAAAATTATATATCTAGAACTACAATTAATTTGTAACTGGACTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAAAATTATATATCTAGAACTACAATTAATTTGTAACTGGACTT  288

seq1  TAATACTAAAACACTGCCAGACTCACTGGTTAGTGGCTGGGCATGGTGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTAAAACACTGCCAGACTCACTGGTTAGTGGCTGGGCATGGTGAT  338

seq1  GTGTGCCTGTAATTCCATTAATTATGATCTAGAAGACAGCCTGGACTATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTGTAATTCCATTAATTATGATCTAGAAGACAGCCTGGACTATG  388

seq1  TAGTGAGACCTTGTAGTCACGGACAAAATACTATGTAAGGACTCTCTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGACCTTGTAGTCACGGACAAAATACTATGTAAGGACTCTCTTCC  438

seq1  TGAAGAAGCAGCTATGCAAGGTATAGTTCATCTATGAAGATGTACATGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGCAGCTATGCAAGGTATAGTTCATCTATGAAGATGTACATGAA  488

seq1  ACAGGAGTTGAACTGCCCGAGAATGAATAAGAACAGCAGAAGCAGCTTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTTGAACTGCCCGAGAATGAATAAGAACAGCAGAAGCAGCTTAT  538

seq1  ATGTGCAGAGATTTGCATGAATGGAGAACTTTTTGGTAGACGTAGGCCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGAGATTTGCATGAATGGAGAACTTTTTGGTAGACGTAGGCCTC  588

seq1  CAAGCTTCCTGGGAAGGTAGACAAAGCTGGTAAATTGCAATAAACTTTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTCCTGGGAAGGTAGACAAAGCTGGTAAATTGCAATAAACTTTAG  638

seq1  AGTAAGAGAAGCAGTCTTTGAATTTGCCTCGAAGGACATGAGAAGAAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGAAGCAGTCTTTGAATTTGCCTCGAAGGACATGAGAAGAAATG  688

seq1  ATGGTGTATAAATGCTGTGTAGATGAGTTGGCAAAGCTGAGTAGAAGCTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTATAAATGCTGTGTAGATGAGTTGGCAAAGCTGAGTAGAAGCTA  738

seq1  TGCTTAGATTGGACGATGAAGTCAGAAAGGCCTGTTTATTGATACAAGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGATTGGACGATGAAGTCAGAAAGGCCTGTTTATTGATACAAGAA  788

seq1  GATGGAGGTCCTGAGGGCATGGTCAGTGGGGTGGTCCTGCCAGAAGCAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGTCCTGAGGGCATGGTCAGTGGGGTGGTCCTGCCAGAAGCAGA  838

seq1  AAGTTGTCAGGAAAAGATAAACTTCGGCTTCCCCAGCTCCCTTTCAAAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTCAGGAAAAGATAAACTTCGGCTTCCCCAGCTCCCTTTCAAAGC  888

seq1  AGGATGTTAACAGAAGTAGTCCACCACTGTGTTTGCACATGAGCCAATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTTAACAGAAGTAGTCCACCACTGTGTTTGCACATGAGCCAATGA  938

seq1  CAGGACCACTTCCAATTTTCTTAATGTTTATTTTTTTTTCCTCTGGGGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCACTTCCAATTTTCTTAATGTTTATTTTTTTTTCCTCTGGGGAC  988

seq1  AGCAACAAGTCCTCTAAAAAGACACAGGCTCCTTACAGGAATCAGAGAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAGTCCTCTAAAAAGACACAGGCTCCTTACAGGAATCAGAGAAA  1038

seq1  CCAAGGCTAGAGTCCTGTTTGCTTACCAGAATGGTTGTTCCATTCCAACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCTAGAGTCCTGTTTGCTTACCAGAATGGTTGTTCCATTCCAACT  1088

seq1  TCTCTTTGTGATTACATTCAAGATTCTTAGTATAAAAAGCTAAAACTGGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTGATTACATTCAAGATTCTTAGTATAAAAAGCTAAAACTGGG  1138

seq1  AAAGACACACCTTTGAGAATTC  1170
      ||||||||||||||||||||||
seq2  AAAGACACACCTTTGAGAATTC  1160


seq1: chr1_151747569_151748780
seq2: B6Ng01-191I01.g_65_1212

seq1  GAATTCTTTTTTCATTAATAAATTAATAAATAACTACCTTATTGTGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCATTAATAAATTAATAAATAACTACCTTATTGTGATAA  50

seq1  TTCTGAAAGTACAAAAATAATAAAATTAATCAAACATTATTTCTTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGTACAAAAATAATAAAATTAATCAAACATTATTTCTTCTGAT  100

seq1  CTTTTACTGATTTGGACCTAATTATTTGAGACAGAATTATTTCCTTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTGATTTGGACCTAATTATTTGAGACAGAATTATTTCCTTAGAG  150

seq1  ATGCTTAATTTACAGCAATATATCGACAGTAAACGTGTCCTTACAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAATTTACAGCAATATATCGACAGTAAACGTGTCCTTACAATAGT  200

seq1  GATAGTAAATATATGTTCCAACAAAGTAGGACACAAGGTTGAAATACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAAATATATGTTCCAACAAAGTAGGACACAAGGTTGAAATACTTC  250

seq1  GAATTTTGCAACCACCTTATCATCCCAAATGCTAACAGACTCTCCAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGCAACCACCTTATCATCCCAAATGCTAACAGACTCTCCAGTGG  300

seq1  AGTCCAAAATTGATGCTTCATTTCACTGCTATTATTTGGAACAACAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAAATTGATGCTTCATTTCACTGCTATTATTTGGAACAACAAAAT  350

seq1  ATCAATACCTCATAGTATTTATCATTTCAATCAAGGTGTATATATTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATACCTCATAGTATTTATCATTTCAATCAAGGTGTATATATTTAAC  400

seq1  AATAAGAGATCATTTAGAACAATTGTCTATGGATATGGCTAAATGATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGATCATTTAGAACAATTGTCTATGGATATGGCTAAATGATAGT  450

seq1  GCTTGCCTAGCCTGTGTAAGGGCTGGTTCTAAGCCACAGCACCACAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTAGCCTGTGTAAGGGCTGGTTCTAAGCCACAGCACCACAAAGA  500

seq1  ATAACCAGAGAGGACAAAGTAAAGGCAGGAAGCAAAAGAGCAAACAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGAGAGGACAAAGTAAAGGCAGGAAGCAAAAGAGCAAACAAGAT  550

seq1  GAAAGATAAAGTTGATAAGAAAAAATATATTTCCAAACATTAAGCCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAAAGTTGATAAGAAAAAATATATTTCCAAACATTAAGCCCAAC  600

seq1  TTTTGAAAATAAATCAATGCACATGGAATATGGAGTGGGACATGATTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAATAAATCAATGCACATGGAATATGGAGTGGGACATGATTCTG  650

seq1  CTGCTACTTACTTGGTTGAAAATAAAAGGGACTTCTTTCTTCTCTCCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTTACTTGGTTGAAAATAAAAGGGACTTCTTTCTTCTCTCCCAC  700

seq1  TTTCATTGAAGATACAGGGAATGTAGCTGTGCCTAGGGTTTCATCCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGAAGATACAGGGAATGTAGCTGTGCCTAGGGTTTCATCCATGA  750

seq1  CGTAGTTGGCATCCATCAGTGTGATCTACAAAGCAAAGCAGAACGTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTTGGCATCCATCAGTGTGATCTACAAAGCAAAGCAGAACGTAAGA  800

seq1  TGTTTCTCGGAATCTTTAGAAGCACTCTCTAAAATGTCTGTCACAGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCGGAATCTTTAGAAGCACTCTCTAAAATGTCTGTCACAGAGGA  850

seq1  CAAGAGTGATGGTACATCAGTTAAGGGCACTAGATATTCTTCCAAAAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGATGGTACATCAGTTAAGGGCACTAGATATTCTTCCAAAAGGA  900

seq1  CCTAGGCTCAATTCCCCACACCCATGTGGCATGTCACACTGTCTGTACC-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCTAGGCTCAATTCCCCACACCCATGTGGCATGTCACACTGTCTGTACCT  950

seq1  TCCAGTTCT-AAGGAATCTAATGTCCTTG-TCTTGCTTACATGGGCATTG  997
      ||||||||| |||||||||||||| |||| ||||||||||||||||||||
seq2  TCCAGTTCTAAAGGAATCTAATGTTCTTGTTCTTGCTTACATGGGCATTG  1000

seq1  CATGCACATAGTGTACGGACATAATACCATCCAAACACTCAACACATTAT  1047
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATGCACATAGTGTACGGACAT-ATACCATCCAAACACTCAACACATTAT  1049

seq1  ATCAAAAAATAAGGTATTTTTTTAAAAGAACCTGTTTATCAT-ATAAAG-  1095
      |||||||||| ||||| |||||| |||||  ||||||||||| |||||| 
seq2  ATCAAAAAAT-AGGTA-TTTTTTGAAAGA--CTGTTTATCATAATAAAGT  1095

seq1  TTCTAGGCCAGGTAAGGTAACACAAAACCTTTAATACCAGCATCAAGG--  1143
      ||||||  || || | ||| ||||||||| ||||| ||||||||||||  
seq2  TTCTAG--CAAGTTAAGTACCACAAAACC-TTAAT-CCAGCATCAAGGTC  1141

seq1  -GGCAGGGCAGGCAGATATTAGAAGTTTGAGGGCAGTCTTCTCTACAAAG  1192
       | ||||                                           
seq2  AGCCAGG-------------------------------------------  1148

seq1  TAGGTTCCATGTCAGCCAGG  1212
                          
seq2  --------------------  1148


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