BAC Information

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BAC

Clone NameB6Ng01-191K04
Chromosome1 (Build37)
Map Location 116,161,196 - 116,162,286
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K04.bB6Ng01-191K04.g
ACCGA015077GA015078
length1,2251,106
definitionB6Ng01-191K04.b B6Ng01-191K04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggaaaagatcctttcccaatctgttggtgacct
ttttgtcttcttgacggtgacttttgctttgcagaagctttgcaatttta
tgagatcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatgtctttgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagtaatggatcaattcgc
aatcttctacatgataacagccagttgtgccagcatcatttgttgaaaat
gctgtcttttttccactggatggcaagcttgtacaaccactctggaaatc
agtctggcggttcctcagaaaattggagatagtactaccggaggatccag
caatacctctcctggacatatatccagaagatgtcccaactggtatgaag
gacacatgctccactatgttcatagcagccttatttataatagccagaag
ctggaaagaacccagatgcccctcaaaagaggaatggatacagaaaatgt
ggtacatttacacaatggaatactactcagctattaaaaaaatgaattta
tgaaattcctaggcaaatggatggacctggagggcatcatcctgagtgag
gtaacccaatcacaaaggaactcgcacaatatgtactcactgataagtgg
atattagcccagaaacttaggatacccaagatataagatacaacttgcta
aacgcatgaaattcaagaagaaggaagaccaaagtgtggacactttaccc
ctttcctagaaatgggaacaaaacacccatgggaaggagttacagaggca
atttggagctttgacaaaaaagatggaccattagtgatgcatatgcaggg
atccatccataatcagctcaatgcgacacatgcacaatactagccaaatt
ttgctgaagactcagatatagctcctcctcttgtgagaactatgcccggc
ctagcaatacggatgatgatccaggtcagctatggaatggcttcaacacg
gcccctcaattacagggagacctag

gaattctgtttgtggcatgcagccctataggaggtacaacaatatgaatc
aaccagtaccgccagagctctcagtgattaaaccataagccaatgagtac
acatggagggaatcatgaccacagatgcatatgtagcaggatggccttgt
ctatcatcaatgggaggaaaggttcttggtgctatgaaggctctatgtcc
cagtgtagggtaatgccagtgccagcaagtaggagtgtatgggttgatga
acaaggggcaaatggatagggggtttttgtttttgaagggaaaaccaaga
aaggggataacatttgaaatgcaagtaatgattatatatatatatttaaa
aaataaaggtgtatgtgacaaaagaaagaagaaaaaatatcaaaaaaaaa
aacaaaagcaaaaagcaaaataaaaaaaaaaaggcttcattacaatatct
tacaaatttgtaaaactatctgggaaaacaaagacaacagcaataaacat
agcatttagaaaatttaaaacaaaaggcaccctgtgttggtggaagcagg
cactcttaggaagtttgaggctgttcagaatatatctttgttttacgaga
aaacttactccatatgggttgtcatccatgcatagtcttgggatccacac
ataatccatgttgttctgctgttgattcaatgccagaactatgtgataat
ttcttatcattgcttttaagacatgaaaacaaatcaggttggtattaaac
tggaagctcatttcaagtgactggtgattggagtgccagaagcatgtttg
tatgctgctctgagaacattgacatttgtggctctggcttgtattggata
ctagatagtacatgttatacagttcaggaaaattaccctggctcttgcaa
taatagcatagctgttatggggataagcaactattttttcagaatagatg
atagatgtaagggatggttcacaggagcattgttgttttgaatattgtta
gctaaagggaaaagaatttaggcttaggaaaattactgacacagaatgga
gttagtataggatagtgttcttgttaagtaaaatatgatatgctaggcta
gctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116161196_116162286
seq2: B6Ng01-191K04.g_68_1173

seq1  GAATTCTGTTTGTGGCATGCAGCCCTATAGGAGGTACAACAATATGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTGTGGCATGCAGCCCTATAGGAGGTACAACAATATGAATC  50

seq1  AACCAGTACCGCCAGAGCTCTCAGTGATTAAACCATAAGCCAATGAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTACCGCCAGAGCTCTCAGTGATTAAACCATAAGCCAATGAGTAC  100

seq1  ACATGGAGGGAATCATGACCACAGATGCATATGTAGCAGGATGGCCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGGGAATCATGACCACAGATGCATATGTAGCAGGATGGCCTTGT  150

seq1  CTATCATCAATGGGAGGAAAGGTTCTTGGTGCTATGAAGGCTCTATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATCAATGGGAGGAAAGGTTCTTGGTGCTATGAAGGCTCTATGTCC  200

seq1  CAGTGTAGGGTAATGCCAGTGCCAGCAAGTAGGAGTGTATGGGTTGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAGGGTAATGCCAGTGCCAGCAAGTAGGAGTGTATGGGTTGATGA  250

seq1  ACAAGGGGCAAATGGATAGGGGGTTTTTGTTTTTGAAGGGAAAACCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGGCAAATGGATAGGGGGTTTTTGTTTTTGAAGGGAAAACCAAGA  300

seq1  AAGGGGATAACATTTGAAATGCAAGTAATGATTATATATATATATTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGATAACATTTGAAATGCAAGTAATGATTATATATATATATTTAAA  350

seq1  AAATAAAGGTGTATGTGACAAAAGAAAGAAGAAAAAATATCAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGGTGTATGTGACAAAAGAAAGAAGAAAAAATATCAAAAAAAAA  400

seq1  AACAAAAGCAAAAAGCAAAATAAAAAAAAAAAGGCTTCATTACAATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGCAAAAAGCAAAATAAAAAAAAAAAGGCTTCATTACAATATCT  450

seq1  TACAAATTTGTAAAACTATCTGGGAAAACAAAGACAACAGCAATAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTTGTAAAACTATCTGGGAAAACAAAGACAACAGCAATAAACAT  500

seq1  AGCATTTAGAAAATTTAAAACAAAAGGCACCCTGTGTTGGTGGAAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTAGAAAATTTAAAACAAAAGGCACCCTGTGTTGGTGGAAGCAGG  550

seq1  CACTCTTAGGAAGTTTGAGGCTGTTCAGAATATATCTTTGTTTTACGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTAGGAAGTTTGAGGCTGTTCAGAATATATCTTTGTTTTACGAGA  600

seq1  AAACTTACTCCATATGGGTTGTCATCCATGCATAGTCTTGGGATCCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTACTCCATATGGGTTGTCATCCATGCATAGTCTTGGGATCCACAC  650

seq1  ATAATCCATGTTGTTCTGCTGTTGATTCAATGCCAGAACTATGTGATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCATGTTGTTCTGCTGTTGATTCAATGCCAGAACTATGTGATAAT  700

seq1  TTCTTATCATTGCTTTTAAGACATGAAAACAAATCAGGTTGGTATTAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCATTGCTTTTAAGACATGAAAACAAATCAGGTTGGTATTAAAC  750

seq1  TGGAAGCTCATTTCAAGTGACTGGTGATTGGAGTGCCAGAAGCATGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTCATTTCAAGTGACTGGTGATTGGAGTGCCAGAAGCATGTTTG  800

seq1  TATGCTGCTCTGAGAACATTGACATTTGTGGCTCTGGCTTGTATTGGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGCTCTGAGAACATTGACATTTGTGGCTCTGGCTTGTATTGGATA  850

seq1  CTAGATAGTACATGTTATACAGTTCAGGAAAATTACCCTGGCTCTTGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGTACATGTTATACAGTTCAGGAAAATTACCCTGGCTCTTGCAA  900

seq1  TAATAGCATAGCTGTTATGGGGATAAGCAACTA-TTTTTCAGAATAGATG  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAATAGCATAGCTGTTATGGGGATAAGCAACTATTTTTTCAGAATAGATG  950

seq1  ATAGATGTAA-GGATGGTTCACAGGAGCA----TGTGTTTGATATTGTTA  994
      |||||||||| ||||||||||||||||||    ||| ||  |||||||||
seq2  ATAGATGTAAGGGATGGTTCACAGGAGCATTGTTGTTTTGAATATTGTTA  1000

seq1  GCTAA--GGGAAAGAA-TTAGGC-TAGGAAAATAACAGGACACAGA--TG  1038
      |||||  || |||||| |||||| ||||||||| ||  ||||||||   |
seq2  GCTAAAGGGAAAAGAATTTAGGCTTAGGAAAATTAC-TGACACAGAATGG  1049

seq1  AG-TAGTAATAGATAGTGTT-TTGTTAGGT-AAATATGATATGCTA-GCT  1084
      || |||||   ||||||||| |||||| || ||||||||||||||| |||
seq2  AGTTAGTATAGGATAGTGTTCTTGTTAAGTAAAATATGATATGCTAGGCT  1099

seq1  AGCTTGC  1091
      |||| ||
seq2  AGCTGGC  1106


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