BAC Information

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BAC

Clone NameB6Ng01-191M19
Chromosome1 (Build37)
Map Location 62,997,763 - 63,130,638
singlet/doubletdoublet
Overlap geneA430093A21Rik
Upstream genePard3b, LOC667592, Nrp2, LOC100043070
Downstream geneNdufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M19.bB6Ng01-191M19.g
ACCGA015203GA015204
length1,1601,050
definitionB6Ng01-191M19.b B6Ng01-191M19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,129,470 - 63,130,638)(62,997,763 - 62,998,819)
sequence
gaattcaggtggtctgtaagagcaatatatgttcttaactcctgagccat
cttttcagcccctaggacatacttttgaatgtgctgtgagctaaaattct
acctagtaggaagcattccttatttcctttagatggtagcactagaaagc
caaataaaggatatgagtaggaggagaaacgtgaatggtcagaaggcctt
tgagagcatcagttcccacaacagatcagaaatacagcagtcagtgagac
gatcctgtgggagagcatgtatttatccattgctggtgaatagtgtgact
atcatcgaattataaaacaattgtttgggggcttctgactcatacctgta
atatagcacttggaagactgaggcatgagtttgaggctagtctgggctat
agagtgagaacctgtttcaaaaaaacaatacagggggcagagagatggct
cagcagttaagaacacttgactttcttgtagagtacctgagtttgggaga
ctcacaattacctgtaattccagatccaaaagatctagtcccctcttctg
gcctccaagaggagcacccacacatgtggcatattcttatatatatatgc
acattaaaaaatttccagccatcggtaactctggttacagaggatctgat
gctctttctcactgtccatgggcagtaagcatgtacgttgtacccagaca
tacatgtaggcaaaacacttaagtataaaataaaaccccacaaaactata
caaatacacatataatatgtgttatttatagcttatatataatcttacat
atatttatcaagctcatttttgggtttccatcctagcagtaaatgttgga
acttgtatgtgcaggttgtttactgtagcattgcttacagaataacaacc
tgaatatgttgagtaaccaatgggaaatttgaatgagttatatgttttac
acattattatagaactgtttttgagagtgaatgagatctgactgcgttgt
gtttaacattactggtggttaaaaaaaattcaggaggattatgttatttc
attttgtaaaactaagtaaacaaagactaagcagagcatcagttgttctt
tggttgtgtacatggctagattgtgctgaactgatgtaagatagtgaaag
gtccatctta
gaattcaatcccaaccatgaacatgagcccagtggcctccagtgacaacc
ttctccacttatatgagccacaaaggctcagctctgcactgacttgcggc
caaggggaggggaggggaccccttctctgatccattctccgttgcaaaca
gttcaataaaactgatagaatcagaaagctttcttttcctagtgatggct
caacctgctgttttatttctgctgacttggagatcatttaccatgcatgt
tgttaaccaggtttattgaaatgcaggaagtatacgtccacagcgcctgg
agaagccgccctgagcctgctgtcagctctcttagtactggctaggtcag
gcaggaagcacatctcagtggttgctggcaggatggccattttggtcagg
agccaggcctgggttgtcttccaatgtcactcttgagggaggcttagcag
ccgtgcaacctctcctgggacactgtcatccaagcgtttcacagaacatg
gatttgcctggcagcctgaaacagcacagtgcctttcccccaaatccttt
atctatgcatctcaagaaggtctgagggaggataaagctatatttcatac
caagaggccagttggcaggttctctttgggaaagcagcatctcagggcct
ggtgctgatataaaaatacagtttagtcttcgcatgaacatgagagtctt
tgcagaaaccaggatgtgggaattcccaagtttgagaatgctgaattctt
actttttggttcactgaacaaatctctattagctaactacattaccctca
caaaagtgatgtttgcagcagcttaaaaatgtaataggaagataagtatg
atgatgcctataatcccagcacttgggaggctgagggttgtgagttcaaa
gccagcctgggttatatagcaagatcctgtctcaaaaaaaaattccagat
tttatgtgccaacattaatttcttcacttcatgaaactagagaaattcac
cattctgagaattaggaaccactgcttctttcttgttatacctattcacc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63129470_63130638
seq2: B6Ng01-191M19.b_46_1205 (reverse)

seq1  TAAGATGTGCACTTCACCTATCTTTACATCAGTCAGGCAC-ATCTACCCA  49
      |||||||  |  |||| ||||| ||||||||||   |||| ||||| |||
seq2  TAAGATGGACCTTTCA-CTATC-TTACATCAGTTCAGCACAATCTAGCCA  48

seq1  TGTACACAACCAAAGAACACACTGATGCTCTTGCTTAGTTCCTTTTGTTT  99
      ||||||||||||||||||| |||||||||| ||||||||    |||||||
seq2  TGTACACAACCAAAGAACA-ACTGATGCTC-TGCTTAGT---CTTTGTTT  93

seq1  ACTTAGTTTTTACAAAATGAAATAACATAATTCCTCTTGATTTTTTTTTA  149
      |||||| ||||||||||||||||||||||| ||||| ||| |||||||||
seq2  ACTTAG-TTTTACAAAATGAAATAACATAA-TCCTCCTGAATTTTTTTTA  141

seq1  ACCACCAGTTATGTTAAACACAACGCAGTCAGATCTCATTCACTCTTCAA  199
      ||||||||| ||||||||||||||||||||||||||||||||||| ||||
seq2  ACCACCAGTAATGTTAAACACAACGCAGTCAGATCTCATTCACTC-TCAA  190

seq1  AAACAGTTCTATAATAATGTGTAAAACATATAACTCATTCAAATTTCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTCTATAATAATGTGTAAAACATATAACTCATTCAAATTTCCCA  240

seq1  TTGGTTACTCAACATATTCAGGTTGTTATTCTGTAAGCAATGCTACAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTACTCAACATATTCAGGTTGTTATTCTGTAAGCAATGCTACAGTA  290

seq1  AACAACCTGCACATACAAGTTCCAACATTTACTGCTAGGATGGAAACCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCTGCACATACAAGTTCCAACATTTACTGCTAGGATGGAAACCCA  340

seq1  AAAATGAGCTTGATAAATATATGTAAGATTATATATAAGCTATAAATAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAGCTTGATAAATATATGTAAGATTATATATAAGCTATAAATAAC  390

seq1  ACATATTATATGTGTATTTGTATAGTTTTGTGGGGTTTTATTTTATACTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTATATGTGTATTTGTATAGTTTTGTGGGGTTTTATTTTATACTT  440

seq1  AAGTGTTTTGCCTACATGTATGTCTGGGTACAACGTACATGCTTACTGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTTGCCTACATGTATGTCTGGGTACAACGTACATGCTTACTGCC  490

seq1  CATGGACAGTGAGAAAGAGCATCAGATCCTCTGTAACCAGAGTTACCGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACAGTGAGAAAGAGCATCAGATCCTCTGTAACCAGAGTTACCGAT  540

seq1  GGCTGGAAATTTTTTAATGTGCATATATATATAAGAATATGCCACATGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAAATTTTTTAATGTGCATATATATATAAGAATATGCCACATGTG  590

seq1  TGGGTGCTCCTCTTGGAGGCCAGAAGAGGGGACTAGATCTTTTGGATCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTCCTCTTGGAGGCCAGAAGAGGGGACTAGATCTTTTGGATCTG  640

seq1  GAATTACAGGTAATTGTGAGTCTCCCAAACTCAGGTACTCTACAAGAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAGGTAATTGTGAGTCTCCCAAACTCAGGTACTCTACAAGAAAG  690

seq1  TCAAGTGTTCTTAACTGCTGAGCCATCTCTCTGCCCCCTGTATTGTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTTCTTAACTGCTGAGCCATCTCTCTGCCCCCTGTATTGTTTTT  740

seq1  TTGAAACAGGTTCTCACTCTATAGCCCAGACTAGCCTCAAACTCATGCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAGGTTCTCACTCTATAGCCCAGACTAGCCTCAAACTCATGCCT  790

seq1  CAGTCTTCCAAGTGCTATATTACAGGTATGAGTCAGAAGCCCCCAAACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCCAAGTGCTATATTACAGGTATGAGTCAGAAGCCCCCAAACAA  840

seq1  TTGTTTTATAATTCGATGATAGTCACACTATTCACCAGCAATGGATAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATAATTCGATGATAGTCACACTATTCACCAGCAATGGATAAAT  890

seq1  ACATGCTCTCCCACAGGATCGTCTCACTGACTGCTGTATTTCTGATCTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTCTCCCACAGGATCGTCTCACTGACTGCTGTATTTCTGATCTGT  940

seq1  TGTGGGAACTGATGCTCTCAAAGGCCTTCTGACCATTCACGTTTCTCCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAACTGATGCTCTCAAAGGCCTTCTGACCATTCACGTTTCTCCTC  990

seq1  CTACTCATATCCTTTATTTGGCTTTCTAGTGCTACCATCTAAAGGAAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCATATCCTTTATTTGGCTTTCTAGTGCTACCATCTAAAGGAAATA  1040

seq1  AGGAATGCTTCCTACTAGGTAGAATTTTAGCTCACAGCACATTCAAAAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCTTCCTACTAGGTAGAATTTTAGCTCACAGCACATTCAAAAGT  1090

seq1  ATGTCCTAGGGGCTGAAAAGATGGCTCAGGAGTTAAGAACATATATTGCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTAGGGGCTGAAAAGATGGCTCAGGAGTTAAGAACATATATTGCT  1140

seq1  CTTACAGACCACCTGAATTC  1169
      ||||||||||||||||||||
seq2  CTTACAGACCACCTGAATTC  1160

seq1: chr1_62997763_62998819
seq2: B6Ng01-191M19.g_69_1118

seq1  GAATTCAATCCCAACCATGAACATGAGCCCAGTGGCCTCCAGTGACAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCAACCATGAACATGAGCCCAGTGGCCTCCAGTGACAACC  50

seq1  TTCTCCACTTATATGAGCCACAAAGGCTCAGCTCTGCACTGACTTGCGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACTTATATGAGCCACAAAGGCTCAGCTCTGCACTGACTTGCGGC  100

seq1  CAAGGGGAGGGGAGGGGACCCCTTCTCTGATCCATTCTCCGTTGCAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGAGGGGAGGGGACCCCTTCTCTGATCCATTCTCCGTTGCAAACA  150

seq1  GTTCAATAAAACTGATAGAATCAGAAAGCTTTCTTTTCCTAGTGATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATAAAACTGATAGAATCAGAAAGCTTTCTTTTCCTAGTGATGGCT  200

seq1  CAACCTGCTGTTTTATTTCTGCTGACTTGGAGATCATTTACCATGCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGCTGTTTTATTTCTGCTGACTTGGAGATCATTTACCATGCATGT  250

seq1  TGTTAACCAGGTTTATTGAAATGCAGGAAGTATACGTCCACAGCGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACCAGGTTTATTGAAATGCAGGAAGTATACGTCCACAGCGCCTGG  300

seq1  AGAAGCCGCCCTGAGCCTGCTGTCAGCTCTCTTAGTACTGGCTAGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCGCCCTGAGCCTGCTGTCAGCTCTCTTAGTACTGGCTAGGTCAG  350

seq1  GCAGGAAGCACATCTCAGTGGTTGCTGGCAGGATGGCCATTTTGGTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGCACATCTCAGTGGTTGCTGGCAGGATGGCCATTTTGGTCAGG  400

seq1  AGCCAGGCCTGGGTTGTCTTCCAATGTCACTCTTGAGGGAGGCTTAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCCTGGGTTGTCTTCCAATGTCACTCTTGAGGGAGGCTTAGCAG  450

seq1  CCGTGCAACCTCTCCTGGGACACTGTCATCCAAGCGTTTCACAGAACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCAACCTCTCCTGGGACACTGTCATCCAAGCGTTTCACAGAACATG  500

seq1  GATTTGCCTGGCAGCCTGAAACAGCACAGTGCCTTTCCCCCAAATCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCCTGGCAGCCTGAAACAGCACAGTGCCTTTCCCCCAAATCCTTT  550

seq1  ATCTATGCATCTCAAGAAGGTCTGAGGGAGGATAAAGCTATATTTCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGCATCTCAAGAAGGTCTGAGGGAGGATAAAGCTATATTTCATAC  600

seq1  CAAGAGGCCAGTTGGCAGGTTCTCTTTGGGAAAGCAGCATCTCAGGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGCCAGTTGGCAGGTTCTCTTTGGGAAAGCAGCATCTCAGGGCCT  650

seq1  GGTGCTGATATAAAAATACAGTTTAGTCTTCGCATGAACATGAGAGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGATATAAAAATACAGTTTAGTCTTCGCATGAACATGAGAGTCTT  700

seq1  TGCAGAAACCAGGATGTGGGAATTCCCAAGTTTGAGAATGCTGAATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAACCAGGATGTGGGAATTCCCAAGTTTGAGAATGCTGAATTCTT  750

seq1  ACTTTTTGGTTCACTGAACAAATCTCTATTAGCTAACTACATTACCCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGGTTCACTGAACAAATCTCTATTAGCTAACTACATTACCCTCA  800

seq1  CAAAAGTGATGTTTGCAGCAGCTTAAAAATGTAATAGGAAGATAAGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGATGTTTGCAGCAGCTTAAAAATGTAATAGGAAGATAAGTATG  850

seq1  ATGATGCCTATAATCCCAGCACTTGGGAGGCTGAGGGTTGTGAGTTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCCTATAATCCCAGCACTTGGGAGGCTGAGGGTTGTGAGTTCAAA  900

seq1  GCCAGCCTGGGTTATATAGCAAGATCCTGTCTCAAAAAAAAATTCCAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGGTTATATAGCAAGATCCTGTCTCAAAAAAAAATTCCAGAT  950

seq1  TTTATGTGCCAACATTAATTTCTTCACTTCATGAAACTAGAGAAATTTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTATGTGCCAACATTAATTTCTTCACTTCATGAAACTAGAGAAA-TTCA  999

seq1  CCCATTTCTTGGAGAATAGGAAACCACTTGCTTCTTCCTTGGTTATACCT  1050
      ||   ||||  ||||||  | |||||| |||||||| ||| |||||||||
seq2  CC--ATTCT--GAGAATTAGGAACCAC-TGCTTCTTTCTT-GTTATACCT  1043

seq1  ATTCACC  1057
      |||||||
seq2  ATTCACC  1050