BAC Information

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BAC

Clone NameB6Ng01-192E17
Chromosome1 (Build37)
Map Location 11,149,290 - 11,150,347
singlet/doubletsinglet
Overlap genenone
Upstream geneArfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik, LOC665262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192E17.bB6Ng01-192E17.g
ACCGA015569GA015570
length1,2091,057
definitionB6Ng01-192E17.b B6Ng01-192E17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttgttctgtgtaaaggcaaatgatcccctgagatttcaaat
attgaaaggttctgtttttgtttgtagatcacaaatgaaataatatggtt
ccttctgtgcagcacttactactatgtcactcttgattaaccatctgaat
cagaaacaaacttgatctgttccagttttttcatataagaccttaattgg
taaatattacgtgagccagtttgtgttggcaatattcaccaatgttccca
aactgcaaaacagaagagtcaggatttgggatcaggttcttcattagctc
cagagctcttcagataatagtaatgttatcgatggtggaacatttaaagt
acagcaagaaatttctctttatagcagacagagactatcaaagaaactat
actggccaaaatacagagaagaactgaccctaaggtattcagccccaaca
gatatatctactaaaccactcctgtacctaaggttcatgaatgattgtaa
gattcaaacaacagggaagtctgccttgagcttatatctcctaaaaatga
cagggaagctttaccaaaactctgcaacaataaggctattgaaacaagac
caaaacctgttttgaaaacactaataggcagcagcagcaccaggtctacc
ttgggcttaaacttggtggagagtcccacggtccccagaggactctccac
tctccaggtgccccagaatgcccaggatcttaggatcaccactgagtaga
acgcaacatctgttccaacaccaccaggagtgactgggaccagcaggagc
cagaggtacaggaaccatgcacaaccagtggctcgggttctttccattca
gtgggaggcaagtataagaacagaagcaacagaaaccaaggttacttggc
atcatcagaacccaattctcctgccacagcaggtcctgatacaccatcac
accagaggaagcaagatatggctctaaagtcacttcccataacattgatg
gaggacttttagaatgacataaatggctcccttaagaaatactggagaca
taggtaacagtagaagccctttagagaaacaaaatcctttaacatatagg
aacacattccaaaagtgaggattagaactatccattcaagaatctaaatg
agtgtaccaagaatacaagggaaaacctctgggaattcgaagacactatg
gtgcagaca

gaattctctctccaagatgctgtctgggatacttcaaacatctgaaaaca
aaaatgatctagcatctccgtcctgccttagaaatctgactgctttgttg
ttctctgtgattatttgatccttagagcatattttcatcccatgtttgag
gccattttagaatctctgacttcaatccatacacaccttgtaaacagact
cgtggttatttgttattttgtgtgggttgttgttgtttgtctgcatgtgt
atgaatgtgcaccatgtgcatgcctggtgcccatggagtccataagaggt
tcacagatggttttaagccaccatatggatactgcaaattgaacctaggt
cctttacaggagcagaaagttctcttaactgccaaaccttcatttaagcc
cctcacattcactttaaataaataaaaaaaaaaagatgcaattctttcta
tagtgtttacttgctgtaagtcagtacatatgtagtatactaatcaaagt
gatatatgcatcagagtggttaggttaaaatggcaatatttgagtttgtc
aaatatttatttttttccaaaagtatttttgtttttttaaagcatttaca
caaatagatataccatctatcatatctaacttagatagcctttaaagaat
tctcaaaagtattcagagactctgagcacagagtctctacatgtctttaa
ccccatcattctctgtgtatttaaggccaacttggcctacacagtaagtt
ctaggtgaatcaaggctacacagtaagaccttgtgtcaaaaataaaataa
aacaaaaatatctaaataatcagagactcaaaattgcttgatgaggaaga
aaggaatgtgaattgtctatgattaaaattgtattccagatgtcattgac
aagttcaacacccatggctattatatgatggcagaatgagcatgtggagt
ctgacggtggacacgtccaccttcgagtatgcgggtggtaatatgagtat
gatagcccgcggcacaaagtgcaaatgtgtgaaaagatgtggagccaaag
gtcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11149290_11150347
seq2: B6Ng01-192E17.g_66_1122

seq1  GAATTCTCTCTCCAAGATGCTGTCTGGGATACTTCAAACATCTGAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCAAGATGCTGTCTGGGATACTTCAAACATCTGAAAACA  50

seq1  AAAATGATCTAGCATCTCCGTCCTGCCTTAGAAATCTGACTGCTTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCTAGCATCTCCGTCCTGCCTTAGAAATCTGACTGCTTTGTTG  100

seq1  TTCTCTGTGATTATTTGATCCTTAGAGCATATTTTCATCCCATGTTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGATTATTTGATCCTTAGAGCATATTTTCATCCCATGTTTGAG  150

seq1  GCCATTTTAGAATCTCTGACTTCAATCCATACACACCTTGTAAACAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTTAGAATCTCTGACTTCAATCCATACACACCTTGTAAACAGACT  200

seq1  CGTGGTTATTTGTTATTTTGTGTGGGTTGTTGTTGTTTGTCTGCATGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTTATTTGTTATTTTGTGTGGGTTGTTGTTGTTTGTCTGCATGTGT  250

seq1  ATGAATGTGCACCATGTGCATGCCTGGTGCCCATGGAGTCCATAAGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTGCACCATGTGCATGCCTGGTGCCCATGGAGTCCATAAGAGGT  300

seq1  TCACAGATGGTTTTAAGCCACCATATGGATACTGCAAATTGAACCTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATGGTTTTAAGCCACCATATGGATACTGCAAATTGAACCTAGGT  350

seq1  CCTTTACAGGAGCAGAAAGTTCTCTTAACTGCCAAACCTTCATTTAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACAGGAGCAGAAAGTTCTCTTAACTGCCAAACCTTCATTTAAGCC  400

seq1  CCTCACATTCACTTTAAATAAATAAAAAAAAAAAGATGCAATTCTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACATTCACTTTAAATAAATAAAAAAAAAAAGATGCAATTCTTTCTA  450

seq1  TAGTGTTTACTTGCTGTAAGTCAGTACATATGTAGTATACTAATCAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTACTTGCTGTAAGTCAGTACATATGTAGTATACTAATCAAAGT  500

seq1  GATATATGCATCAGAGTGGTTAGGTTAAAATGGCAATATTTGAGTTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGCATCAGAGTGGTTAGGTTAAAATGGCAATATTTGAGTTTGTC  550

seq1  AAATATTTATTTTTTTCCAAAAGTATTTTTGTTTTTTTAAAGCATTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATTTTTTTCCAAAAGTATTTTTGTTTTTTTAAAGCATTTACA  600

seq1  CAAATAGATATACCATCTATCATATCTAACTTAGATAGCCTTTAAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGATATACCATCTATCATATCTAACTTAGATAGCCTTTAAAGAAT  650

seq1  TCTCAAAAGTATTCAGAGACTCTGAGCACAGAGTCTCTACATGTCTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAGTATTCAGAGACTCTGAGCACAGAGTCTCTACATGTCTTTAA  700

seq1  CCCCATCATTCTCTGTGTATTTAAGGCCAACTTGGCCTACACAGTAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCATTCTCTGTGTATTTAAGGCCAACTTGGCCTACACAGTAAGTT  750

seq1  CTAGGTGAATCAAGGCTACACAGTAAGACCTTGTGTCAAAAATAAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGAATCAAGGCTACACAGTAAGACCTTGTGTCAAAAATAAAATAA  800

seq1  AACAAAAATATCTAAATAATCAGAGACTCAAAATTGCTTGATGAGGAAG-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACAAAAATATCTAAATAATCAGAGACTCAAAATTGCTTGATGAGGAAGA  850

seq1  AAGGAATGTGAATTGTCTATGA-TAAAATTGTATTCCAGATGTCATTGAC  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGGAATGTGAATTGTCTATGATTAAAATTGTATTCCAGATGTCATTGAC  900

seq1  AAGTTCAACA-CCATGGCTATTAT-TGATGGCAAGAAGGAGCATGT-GAG  945
      |||||||||| ||||||||||||| ||||||| |||| |||||||| |||
seq2  AAGTTCAACACCCATGGCTATTATATGATGGC-AGAATGAGCATGTGGAG  949

seq1  TCTGACGGTGGACAACGTCCACC-TCGAGTATG-GGGTTGT-ATATGAGT  992
      ||||||||||||| ||||||||| ||||||||| |||| || ||||||||
seq2  TCTGACGGTGGAC-ACGTCCACCTTCGAGTATGCGGGTGGTAATATGAGT  998

seq1  ATGATAGCACGGCGGGCACAAAGTGC-AATGTGGTGGAGAAGATGGTGGA  1041
      |||||||| ||   |||||||||||| ||||||   || ||||| |||||
seq2  ATGATAGCCCG--CGGCACAAAGTGCAAATGTG--TGAAAAGAT-GTGGA  1043

seq1  GCCCAAAGGGTTCTTCA  1058
      | |||||||  ||||||
seq2  G-CCAAAGG--TCTTCA  1057


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