BAC Information

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BAC

Clone NameB6Ng01-192L17
Chromosome1 (Build37)
Map Location 111,796,315 - 111,797,522
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508
Downstream geneCdh7, LOC100041429, EG626652, Cdh19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192L17.bB6Ng01-192L17.g
ACCGA015892GA015893
length1,221814
definitionB6Ng01-192L17.b B6Ng01-192L17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaattaacagttgaaataaatctgttaaacattaatgtctct
gagcatacagttggttagtccagtattaaaggcacataagaagatgttca
cttctttctgctcaaacaatccaaactcacaaggatagcataaagagaag
caatggttttggtagttcatttacccacagaatctcacttgatatactag
cactatacttgcatgtaaagcaagagaaagtgaaagtggtggcttcctca
atgggcaccagattcccacttcctctctgtttgtttgttttgtttctgtt
ttttttttgtttgtttatttttaatgctacttccctctgcttgtacacct
tgccactcctatcaagatgttaagatcctcctgttcagagttattgttac
accactaagacagaaacatagtatacccactttaggagttgatacatact
tcagctttggagaaatgtttacatttgttatagattaaatgatgcaattc
taaagatgtccccatctgagaatgtccatagttttcaaatatattaccct
aaacattatgctaattgcataggattttctcacttactattgaaactaaa
gaatataatttgatcaccacatagttacagagagcaagagtgtaagattt
gatctcttcattattacagaaaacaagagtgtaagactgtggttctaata
caggctttatattttttatgcatggccatgttctatgggaaaatacattc
catcctgccctctctcttgtatctgtctgtgtctctgtctgtgtcattct
ctttatttctgttcctatctctttgtctatgtttatccttgtctctggct
atacatctctagctctccagggtcatcataaagccctatgtagcttagat
taacactgaaatcatgattttcatacctcagtgattgaaaggatgaatta
tgagataggcaacatgcatagccccttcttctgttcttttcaagtgcctc
ctaacatcaaagatagtgcaacgttatttaatcagtctcactctactaat
aaaaagttaatttttttctttttttcaataaacgtccactagtatgcagc
ccactaaacagaaaagaattgacatattattgaccactgagaacttggtc
agaatggagtgaatgatgtaaggttagccaagccagttcaggtttatccg
agagagccttggtaatgggcc

gaattcttcttggtggattttttcctttgattagtatttagtgtccttcc
acatcttctttgatagtttttagttgaaagcctattttattggatattag
aatggttactctagtttgtttcttgggagcaattgcttggaagttttttt
tttagccctttactttcaagtagtgactgtctgtgccactgaggtgtgct
tccttgatgtagcaaaatgctgggtcctgtttacatatccagcatattat
tctgtgtctttttattgcagaattacctccattggttttgagacatatta
aggaccaatgactggtactgcctgttttctttgttggtagaggtggaatt
atgtttgtgtggttcttttctcctggatttgttatgagaagattagtgtt
ttgctttttttgtgggtgtagtgtctgtccttgtgtgtgagttttccttc
tgtgatcctctgtaggacagtattggtggaaagttattgtttcaatttgg
ttttatcatggaatattttgttttcctcctctgtggtaattgagattttt
tactaggcatagtagcctgggttggcacttgtgttctcttagggtctgta
tgatatctgcccaagatattctggcatttagagcctcttttgagaaatct
agtgtaattctgataggtttccatatatatgttacttaacatttttccct
tacacttcttaatattctttctttgttctttgcatttggtgtttggatta
ttgtataatgggagaaatttcttttctggtcccatttttaggcttctttt
tatgtttaaggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111796315_111797522
seq2: B6Ng01-192L17.b_47_1267 (reverse)

seq1  GGCCCATTACCAAG---CTCTCTGATTAAACTGAACT-GCTTTGCTAACC  46
      ||||||||||||||   ||||| ||| || ||||||| |||| |||||||
seq2  GGCCCATTACCAAGGCTCTCTCGGATAAACCTGAACTGGCTTGGCTAACC  50

seq1  -TACATTCATCACTCCA-TCTGA-CAAGTCTTCATTTGGTCA--TATATG  91
       |||||   |||||||| ||||| |||||  |||  ||||||   |||||
seq2  TTACATCATTCACTCCATTCTGACCAAGTTCTCA-GTGGTCAATAATATG  99

seq1  TCCATTCCTTTTCTGTTTAGTGGGCTGCATACTAGTGGACGTTTTATTTG  141
      || ||| |||||||||||||||||||||||||||||||||| ||||||  
seq2  TCAATT-CTTTTCTGTTTAGTGGGCTGCATACTAGTGGACG-TTTATTGA  147

seq1  AAAAAAGAAAAAA--TAACTTTTTATTAGTAGAGTGAGACTGATTAAAT-  188
      |||||||||||||  |||||||||||||||||||||||||||||||||| 
seq2  AAAAAAGAAAAAAATTAACTTTTTATTAGTAGAGTGAGACTGATTAAATA  197

seq1  ACGTTGCACTATCTTTGATG-TAGGAGGCACTTGAAAAG-ACAGAAG-AG  235
      |||||||||||||||||||| |||||||||||||||||| ||||||| ||
seq2  ACGTTGCACTATCTTTGATGTTAGGAGGCACTTGAAAAGAACAGAAGAAG  247

seq1  TGGCTATGCATGTTGCCTATCTCATAATTCATCC-TTCAATCACTGAGGT  284
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGGCTATGCATGTTGCCTATCTCATAATTCATCCTTTCAATCACTGAGGT  297

seq1  ATGAAAATCATGATTTCAGTGTTAATCTAAGCTACATAGGGCTTTATGAT  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATCATGATTTCAGTGTTAATCTAAGCTACATAGGGCTTTATGAT  347

seq1  GACCCTGGAGAGCTAGAGATGTATAGCCAGAGACAAGGATAAACATAGAC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGGAGAGCTAGAGATGTATAGCCAGAGACAAGGATAAACATAGAC  397

seq1  AAAGAGATAGGAACAGAAATAAAGAGAATGACACAGACAGAGACACAGAC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATAGGAACAGAAATAAAGAGAATGACACAGACAGAGACACAGAC  447

seq1  AGATACAAGAGAGAGGGCAGGATGGAATGTATTTTCCCATAGAACATGGC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAAGAGAGAGGGCAGGATGGAATGTATTTTCCCATAGAACATGGC  497

seq1  CATGCATAAAAAATATAAAGCCTGTATTAGAACCACAGTCTTACACTCTT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATAAAAAATATAAAGCCTGTATTAGAACCACAGTCTTACACTCTT  547

seq1  GTTTTCTGTAATAATGAAGAGATCAAATCTTACACTCTTGCTCTCTGTAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGTAATAATGAAGAGATCAAATCTTACACTCTTGCTCTCTGTAA  597

seq1  CTATGTGGTGATCAAATTATATTCTTTAGTTTCAATAGTAAGTGAGAAAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGGTGATCAAATTATATTCTTTAGTTTCAATAGTAAGTGAGAAAA  647

seq1  TCCTATGCAATTAGCATAATGTTTAGGGTAATATATTTGAAAACTATGGA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGCAATTAGCATAATGTTTAGGGTAATATATTTGAAAACTATGGA  697

seq1  CATTCTCAGATGGGGACATCTTTAGAATTGCATCATTTAATCTATAACAA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAGATGGGGACATCTTTAGAATTGCATCATTTAATCTATAACAA  747

seq1  ATGTAAACATTTCTCCAAAGCTGAAGTATGTATCAACTCCTAAAGTGGGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACATTTCTCCAAAGCTGAAGTATGTATCAACTCCTAAAGTGGGT  797

seq1  ATACTATGTTTCTGTCTTAGTGGTGTAACAATAACTCTGAACAGGAGGAT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATGTTTCTGTCTTAGTGGTGTAACAATAACTCTGAACAGGAGGAT  847

seq1  CTTAACATCTTGATAGGAGTGGCAAGGTGTACAAGCAGAGGGAAGTAGCA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATCTTGATAGGAGTGGCAAGGTGTACAAGCAGAGGGAAGTAGCA  897

seq1  TTAAAAATAAACAAACAAAAAAAAAACAGAAACAAAACAAACAAACAGAG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAAACAAACAAAAAAAAAACAGAAACAAAACAAACAAACAGAG  947

seq1  AGGAAGTGGGAATCTGGTGCCCATTGAGGAAGCCACCACTTTCACTTTCT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGGAATCTGGTGCCCATTGAGGAAGCCACCACTTTCACTTTCT  997

seq1  CTTGCTTTACATGCAAGTATAGTGCTAGTATATCAAGTGAGATTCTGTGG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTACATGCAAGTATAGTGCTAGTATATCAAGTGAGATTCTGTGG  1047

seq1  GTAAATGAACTACCAAAACCATTGCTTCTCTTTATGCTATCCTTGTGAGT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAACTACCAAAACCATTGCTTCTCTTTATGCTATCCTTGTGAGT  1097

seq1  TTGGATTGTTTGAGCAGAAAGAAGTGAACATCTTCTTATGTGCCTTTAAT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGTTTGAGCAGAAAGAAGTGAACATCTTCTTATGTGCCTTTAAT  1147

seq1  ACTGGACTAACCAACTGTATGCTCAGAGACATTAATGTTTAACAGATTTA  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTAACCAACTGTATGCTCAGAGACATTAATGTTTAACAGATTTA  1197

seq1  TTTCAACTGTTAATTACTGAATTC  1208
      ||||||||||||||||||||||||
seq2  TTTCAACTGTTAATTACTGAATTC  1221


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