BAC Information

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BAC

Clone NameB6Ng01-192L21
Chromosome1 (Build37)
Map Location 16,241,344 - 16,242,074
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10
Downstream geneEG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192L21.bB6Ng01-192L21.g
ACCGA015900GA015901
length1,107731
definitionB6Ng01-192L21.b B6Ng01-192L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgatggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagtgcaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatctgcctattgccctttctaattcgtttgaagaattgagttggaattt
tgatggggatttcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttctttagtgacttggaagttcttatca
tacagatctttaacttccttagttagagtcacgcccaaggtatttttata
ttatttgtgactattgagagggtgttgtttcctaatttctttctcagcct
gtttatttcttttgtatacagaaaggccattgacttggtgtgagtaattt
tatatcagctacttcattgaagctgttattcaggttaggaagttctctgg
gggaatt
gaattcctgttttaggtctttattgagaaacaactttctgttccctttat
tttttttttaagagattaaaaaattgttagtccaggcaggtgattgtaag
atgcgaggaagacattagattctctggatctggggttagagttgtaagcc
aactgacatggggcctgcaaaccaagctcagggcccctggatgtgagcac
ttatcacagtgcatctttccagccggagaaacagtctacatagtcctatt
tcataggtgacagggcttacttattttggataccttttttgttttttaag
acaaattctcccataaacaagctggccctgaactcatcgaatagctaagg
gtgatccaatctactgaccctcttgcctcccctttttcatgaattccaga
cctgggtgcccacaaaaccgaatgggtgtgtttttctggatagttaagcc
ttaagtgaaggtgtactggatacagacaggaagccaagggaggaaatggg
acagcacagtgctgtgggggagcgcacagtgtgctgcagtcacaggcaca
catgcaaggagggggctaccctctgactcagggataaatgcttatcttta
aacccaccaacaatagttcatggatactgtagtttataaactgtcacagg
tgttgctctcctgtggggaggtggcttcccttcttataatacttgctaac
cactaaaaagaaggagggggaggaggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_16241344_16242074
seq2: B6Ng01-192L21.g_70_800 (reverse)

seq1  CCCCCCCTCCTCCCCCTCCTTCTTTTTAGTGGTTAGCAAGTATTATAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCTCCTCCCCCTCCTTCTTTTTAGTGGTTAGCAAGTATTATAAGA  50

seq1  AGGGAAGCCACCTCCCCACAGGAGAGCAACACCTGTGACAGTTTATAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCCACCTCCCCACAGGAGAGCAACACCTGTGACAGTTTATAAAC  100

seq1  TACAGTATCCATGAACTATTGTTGGTGGGTTTAAAGATAAGCATTTATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTATCCATGAACTATTGTTGGTGGGTTTAAAGATAAGCATTTATCC  150

seq1  CTGAGTCAGAGGGTAGCCCCCTCCTTGCATGTGTGCCTGTGACTGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCAGAGGGTAGCCCCCTCCTTGCATGTGTGCCTGTGACTGCAGCA  200

seq1  CACTGTGCGCTCCCCCACAGCACTGTGCTGTCCCATTTCCTCCCTTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGCGCTCCCCCACAGCACTGTGCTGTCCCATTTCCTCCCTTGGCT  250

seq1  TCCTGTCTGTATCCAGTACACCTTCACTTAAGGCTTAACTATCCAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTGTATCCAGTACACCTTCACTTAAGGCTTAACTATCCAGAAAA  300

seq1  ACACACCCATTCGGTTTTGTGGGCACCCAGGTCTGGAATTCATGAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCATTCGGTTTTGTGGGCACCCAGGTCTGGAATTCATGAAAAAG  350

seq1  GGGAGGCAAGAGGGTCAGTAGATTGGATCACCCTTAGCTATTCGATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAAGAGGGTCAGTAGATTGGATCACCCTTAGCTATTCGATGAGT  400

seq1  TCAGGGCCAGCTTGTTTATGGGAGAATTTGTCTTAAAAAACAAAAAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCAGCTTGTTTATGGGAGAATTTGTCTTAAAAAACAAAAAAGGT  450

seq1  ATCCAAAATAAGTAAGCCCTGTCACCTATGAAATAGGACTATGTAGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAATAAGTAAGCCCTGTCACCTATGAAATAGGACTATGTAGACTG  500

seq1  TTTCTCCGGCTGGAAAGATGCACTGTGATAAGTGCTCACATCCAGGGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCGGCTGGAAAGATGCACTGTGATAAGTGCTCACATCCAGGGGCC  550

seq1  CTGAGCTTGGTTTGCAGGCCCCATGTCAGTTGGCTTACAACTCTAACCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTGGTTTGCAGGCCCCATGTCAGTTGGCTTACAACTCTAACCCC  600

seq1  AGATCCAGAGAATCTAATGTCTTCCTCGCATCTTACAATCACCTGCCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAGAGAATCTAATGTCTTCCTCGCATCTTACAATCACCTGCCTGG  650

seq1  ACTAACAATTTTTTAATCTCTTAAAAAAAAAATAAAGGGAACAGAAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAATTTTTTAATCTCTTAAAAAAAAAATAAAGGGAACAGAAAGTT  700

seq1  GTTTCTCAATAAAGACCTAAAACAGGAATTC  731
      |||||||||||||||||||||||||||||||
seq2  GTTTCTCAATAAAGACCTAAAACAGGAATTC  731