BAC Information

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BAC

Clone NameB6Ng01-192M06
Chromosome1 (Build37)
Map Location 37,836,406 - 38,006,984
singlet/doubletdoublet
Overlap geneTsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik
Upstream geneZap70, Tmem131, EG241053, A230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik
Downstream geneTxndc9, EG666434, Eif5b, Rev1, EG329123, Aff3, Lonrf2, Chst10, EG625775, Nms
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192M06.bB6Ng01-192M06.g
ACCGA015918GA015919
length9201,019
definitionB6Ng01-192M06.b B6Ng01-192M06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,006,072 - 38,006,984)(37,836,406 - 37,837,422)
sequence
gaattctaacatcacgagttgcatgaggtgtcgactctggttcacagaca
aagtcttaatctgagatcaggggtaaaacttggggttttcagtcacactt
ctaagcctgaatcaccatcagccacgtccttctttctgcatttgccgcag
gagtccgtgcctctgaacggctggccgaagttgacaggccatatcttctg
agacatcaacccaccatgagacttgttggccagaaatactgtatggatcc
tgcagtgatcgctggtgtcctgtcaagagagtctccaggaggcaactatg
tggtcgacctgggcaacattggcagtggacttgggatggtgaaggtaatg
gtccatccgtcaaggtgacccgtggatgagtaaatggcttgggtagtaaa
gttcttcctgggaaagcataaggacctaacacccatgggaaaaaaaaaaa
acaaaaacaaacaacccaattacggtggtgtttaactgtaagctcagtgc
ccagagggtagaggcagggaatttctagagctcacaggccagccagctca
atcaatgaggtccgtgttcaataagggattgaaggatatgctccatggtg
atctctgacttccatgtgcatgttcacacacgagcgcatccaccacatgc
atgccacgtgaacacatgtacacagagagagagagagagacagacagaca
gacagacagacagacacacacagagacaggcacagagagagagagagaga
gagagagatagagagctgtggtctttttgcttttgtgacccagctcccag
gaaacaccacttgtggttgtcactgtaattgacacgatgacacaaagtga
ataatcctgccctagagttttgtgagagccacaacatttctaactatttc
caatgcacctagaagccaca
gaattcctgttttctttctttcttgccttgtcactctggctagatgctca
acaaaatgctgtgcgaggcatatgtgtcactatcagggaaacactcactg
tccactatcaagtagagtggttactataggtttttcatagatgcttttta
taagatcaaaaacatttcctatattcccagattacagttattctttcttt
attgggttttgtcaaattcattttcttctactactagagaaaatcagggg
tttgggttttttttttttttgattattcaatatgtattacattgattggt
ctcaggtacaaaccaatcctacattcatgggataactcctatttgattag
tgtataaattcattttatagacagttatattgagagagaaagaggtgtat
gtgcatgtccacatgtatgggtgtgtgtgcacacatgcatggtgtgtgtg
tgtgaacatgtgtatagaggtcacaggccaacttaggtgtcttttacaat
tgcttttccatctttttgtacacagggtccctcactgaacctggagctca
atgactgactagaatagctgcccagtgaactccaggcatccacatatctg
tgcttcttcgggacttctacaggcacctccaggtacccagcgtttacatg
ggtctggggatccaaatgtagatccttagggttgatcttatgctccaggt
tctttgcagaagatctcaaaccactaacctaacctagtaattaggatatt
gggggcaggtgggaaagaagcaaacggaaagcattttacatagcatggca
tctcctcagctctgtattggttttgtagttatcacattagacttcttccc
tgatctggtattgggtgagggaaaaggactgaagccctgagggtcagcag
aaagatggaaaccaggcaacctcaggaaataggaatgtgtgcagacctca
gaattgcaccgagagatcttgggaggtaagaagacctctcagggatcaaa
gggagggaccttagataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_38006072_38006984
seq2: B6Ng01-192M06.b_46_965 (reverse)

seq1  TGTGGCTCCT-GGTGCATTGGAAAT-GGTAGAAATGTTGTGGCTCTCAC-  47
      ||||||| || |||||||||||||| | ||||||||||||||||||||| 
seq2  TGTGGCTTCTAGGTGCATTGGAAATAGTTAGAAATGTTGTGGCTCTCACA  50

seq1  AAACTCT-GGGCAGGA-TATTCACTCTGTGTCACTGTGTCACTTACAGTG  95
      ||||||| |||||||| |||||||| |||||||  |||||| ||||||||
seq2  AAACTCTAGGGCAGGATTATTCACTTTGTGTCATCGTGTCAATTACAGTG  100

seq1  ACAACCAC-AGTTGTGTTTCCTTGGAGCTGTGTCAC-AAAGC-AAAAGGC  142
      |||||||| ||| ||||||||| ||||||| ||||| ||||| ||||| |
seq2  ACAACCACAAGTGGTGTTTCCTGGGAGCTGGGTCACAAAAGCAAAAAGAC  150

seq1  CACATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCCTGTCTCT  192
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACA-GCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCTGTGCCTGTCTCT  199

seq1  GTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTGT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTGT  249

seq1  GTACATGTGTTCACGTGGCATGCATGTGGTGGATGCGCTCGTGTGTGAAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTGTTCACGTGGCATGCATGTGGTGGATGCGCTCGTGTGTGAAC  299

seq1  ATGCACATGGAAGTCAGAGATCACCATGGAGCATATCCTTCAATCCCTTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGGAAGTCAGAGATCACCATGGAGCATATCCTTCAATCCCTTA  349

seq1  TTGAACACGGACCTCATTGATTGAGCTGGCTGGCCTGTGAGCTCTAGAAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACACGGACCTCATTGATTGAGCTGGCTGGCCTGTGAGCTCTAGAAA  399

seq1  TTCCCTGCCTCTACCCTCTGGGCACTGAGCTTACAGTTAAACACCACCGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCCTCTACCCTCTGGGCACTGAGCTTACAGTTAAACACCACCGT  449

seq1  AATTGGGTTGTTTGTTTTTGTTTTTTTTTTTTCCCATGGGTGTTAGGTCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGTTGTTTGTTTTTGTTTTTTTTTTTTCCCATGGGTGTTAGGTCC  499

seq1  TTATGCTTTCCCAGGAAGAACTTTACTACCCAAGCCATTTACTCATCCAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTTTCCCAGGAAGAACTTTACTACCCAAGCCATTTACTCATCCAC  549

seq1  GGGTCACCTTGACGGATGGACCATTACCTTCACCATCCCAAGTCCACTGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACCTTGACGGATGGACCATTACCTTCACCATCCCAAGTCCACTGC  599

seq1  CAATGTTGCCCAGGTCGACCACATAGTTGCCTCCTGGAGACTCTCTTGAC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTGCCCAGGTCGACCACATAGTTGCCTCCTGGAGACTCTCTTGAC  649

seq1  AGGACACCAGCGATCACTGCAGGATCCATACAGTATTTCTGGCCAACAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACCAGCGATCACTGCAGGATCCATACAGTATTTCTGGCCAACAAG  699

seq1  TCTCATGGTGGGTTGATGTCTCAGAAGATATGGCCTGTCAACTTCGGCCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGTGGGTTGATGTCTCAGAAGATATGGCCTGTCAACTTCGGCCA  749

seq1  GCCGTTCAGAGGCACGGACTCCTGCGGCAAATGCAGAAAGAAGGACGTGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTCAGAGGCACGGACTCCTGCGGCAAATGCAGAAAGAAGGACGTGG  799

seq1  CTGATGGTGATTCAGGCTTAGAAGTGTGACTGAAAACCCCAAGTTTTACC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGTGATTCAGGCTTAGAAGTGTGACTGAAAACCCCAAGTTTTACC  849

seq1  CCTGATCTCAGATTAAGACTTTGTCTGTGAACCAGAGTCGACACCTCATG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCTCAGATTAAGACTTTGTCTGTGAACCAGAGTCGACACCTCATG  899

seq1  CAACTCGTGATGTTAGAATTC  913
      |||||||||||||||||||||
seq2  CAACTCGTGATGTTAGAATTC  920

seq1: chr1_37836406_37837422
seq2: B6Ng01-192M06.g_68_1086

seq1  GAATTCCTGTTTTCTTTCTTTCTTGCCTTGTCACTCTGGCTAGATGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTTTCTTTCTTTCTTGCCTTGTCACTCTGGCTAGATGCTCA  50

seq1  ACAAAATGCTGTGCGAGGCATATGTGTCACTATCAGGGAAACACTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGCTGTGCGAGGCATATGTGTCACTATCAGGGAAACACTCACTG  100

seq1  TCCACTATCAAGTAGAGTGGTTACTATAGGTTTTTCATAGATGCTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTATCAAGTAGAGTGGTTACTATAGGTTTTTCATAGATGCTTTTTA  150

seq1  TAAGATCAAAAACATTTCCTATATTCCCAGATTACAGTTATTCTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCAAAAACATTTCCTATATTCCCAGATTACAGTTATTCTTTCTTT  200

seq1  ATTGGGTTTTGTCAAATTCATTTTCTTCTACTACTAGAGAAAATCAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTTTTGTCAAATTCATTTTCTTCTACTACTAGAGAAAATCAGGGG  250

seq1  TTTGGGTTTTTTTTTTTTTTGATTATTCAATATGTATTACATTGATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTTTTTTTTTTTTTGATTATTCAATATGTATTACATTGATTGGT  300

seq1  CTCAGGTACAAACCAATCCTACATTCATGGGATAACTCCTATTTGATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTACAAACCAATCCTACATTCATGGGATAACTCCTATTTGATTAG  350

seq1  TGTATAAATTCATTTTATAGACAGTTATATTGAGAGAGAAAGAGGTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATTCATTTTATAGACAGTTATATTGAGAGAGAAAGAGGTGTAT  400

seq1  GTGCATGTCCACATGTATGGGTGTGTGTGCACACATGCATGGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTCCACATGTATGGGTGTGTGTGCACACATGCATGGTGTGTGTG  450

seq1  TGTGAACATGTGTATAGAGGTCACAGGCCAACTTAGGTGTCTTTTACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATGTGTATAGAGGTCACAGGCCAACTTAGGTGTCTTTTACAAT  500

seq1  TGCTTTTCCATCTTTTTGTACACAGGGTCCCTCACTGAACCTGGAGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCCATCTTTTTGTACACAGGGTCCCTCACTGAACCTGGAGCTCA  550

seq1  ATGACTGACTAGAATAGCTGCCCAGTGAACTCCAGGCATCCACATATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGACTAGAATAGCTGCCCAGTGAACTCCAGGCATCCACATATCTG  600

seq1  TGCTTCTTCGGGACTTCTACAGGCACCTCCAGGTACCCAGCGTTTACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCGGGACTTCTACAGGCACCTCCAGGTACCCAGCGTTTACATG  650

seq1  GGTCTGGGGATCCAAATGTAGATCCTTAGGGTTGATCTTATGCTCCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGGGATCCAAATGTAGATCCTTAGGGTTGATCTTATGCTCCAGGT  700

seq1  TCTTTGCAGAAGATCTCAAACCACTAACCTAACCTAGTAATTAGGATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCAGAAGATCTCAAACCACTAACCTAACCTAGTAATTAGGATATT  750

seq1  GGGGGCAGGTGGGAAAGAAGCAAACGGAAAGCATTTTACATAGCATGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCAGGTGGGAAAGAAGCAAACGGAAAGCATTTTACATAGCATGGCA  800

seq1  TCTCCTCAGCTCTGTATTGGTTTTGTAGTTATCACATTAAGACTTCTTCC  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTCCTCAGCTCTGTATTGGTTTTGTAGTTATCACATT-AGACTTCTTCC  849

seq1  CTGATCTGGTATTGGGTGAGGGAAAAGGACTGAAGCCCTGAGGGTCAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTGGTATTGGGTGAGGGAAAAGGACTGAAGCCCTGAGGGTCAGCA  899

seq1  GAAAGAATGGAAA-CAGGCAACCTCAGGAAATAGGAAGTTGTGCAGACCC  949
      ||||| ||||||| |||||||||||||||||||||||  |||||||| ||
seq2  GAAAG-ATGGAAACCAGGCAACCTCAGGAAATAGGAATGTGTGCAGA-CC  947

seq1  TCAAGAATGCACC-AGAGA-CCTGGGAGGTAAG-AGA-CTCTCAGGAATC  995
      |||  | |||||| ||||| | ||||||||||| ||| |||||||| |||
seq2  TCAGAATTGCACCGAGAGATCTTGGGAGGTAAGAAGACCTCTCAGGGATC  997

seq1  AAAGGGAGGGACCTTAGATAAA  1017
      ||||||||||||||||||||||
seq2  AAAGGGAGGGACCTTAGATAAA  1019