BAC Information

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BAC

Clone NameB6Ng01-192M24
Chromosome1 (Build37)
Map Location 190,763,189 - 190,764,342
singlet/doubletsinglet
Overlap geneUsh2a
Upstream geneEsrrg, 9330162B11Rik
Downstream geneKctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf, Ptpn14, LOC100042438, Smyd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192M24.bB6Ng01-192M24.g
ACCGA015951GA015952
length2411,149
definitionB6Ng01-192M24.b B6Ng01-192M24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
taggtcttagccctttcagccctgtagttttccttaaaaaaaaaactgca
aatgagtctgtgtggactgataccacagtggaggcacacacctttaattt
cagcgttcagggggcagaggcaagagaatctcgtgagttaaaggactgtc
agggctatacaatgaaaccttgactcaaaagaaagaaagaaatagagaaa
aggagaggaaggaaggaaggaaggaaggaaggaaggaagga

gaattcatagtaggtaaagccatatctgttcagaacatacttggttttct
gggttttatattgatccactaaaactaaaaggccggggagctggaaaatg
caattctgtggtgggatgcctgcctagcacatattaggccctacatttat
ctcctaggaccaaaagccaaaataaaaaccaatacagttccgaatttcct
gtccataatctttgcatcttttcccatccatgttagtcagcttccttcca
ctgcaacagatgcttgcagaaactctaagacaggaagttaacctggaagc
cctaccagccaaggaccaggttacttcctggaatgttgggaatcatagtt
cttggacgaaaaaccaagccatatggaaaaatacggtagccatatttaaa
agcccctgaagcacgtgtctcagggccactcagccgggaattccatggag
tggtcctgatcaagacccatcctggtcagtagctaattaaaagcttgctt
caaatttggttcaaaattatggagctggttttcctcctgcagatctcaga
attaacggtaactttcggagggggatacctacgtgagctgcttcagatgt
tgcacgcatagccagcaagctccactgtttctgggcttgtggggaaaaca
cagcatcatggctgacggggaggcagcagtggggcaagtggcttccctca
tggcggccaggactgagggagagggagtgataaagggtccaaacaaacta
tatccttaaatgacactccccaatgatcactttcttctaactaggtcttg
cctctaaaactttgcaatgtcccattaagttccaaatccctaagtgggct
gatccagtctctccccaaagctgccacctgtgaagatcaatgccctcgga
gccaagccttcaacatgtgaacatttgtagacatttaaaacccagtcacc
cccccaacactacagtgtcagttgttaccaaatgcagtaactgattctac
agaaatgtaagcctaacctttgttaatatttaattagaaaccggacttta
ttacctgttcattcctgcttagcctgtacatagaataagatgatattgac
ttttgatgatagacgtttttttttacaggactggatgtcaaaggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_190763189_190764342
seq2: B6Ng01-192M24.g_64_1212

seq1  GAATTCATAGTAGGTAAAGCCATATCTGTTCAGAACATACTTGGTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTAGGTAAAGCCATATCTGTTCAGAACATACTTGGTTTTCT  50

seq1  GGGTTTTATATTGATCCACTAAAACTAAAAGGCCGGGGAGCTGGAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTATATTGATCCACTAAAACTAAAAGGCCGGGGAGCTGGAAAATG  100

seq1  CAATTCTGTGGTGGGATGCCTGCCTAGCACATATTAGGCCCTACATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGTGGTGGGATGCCTGCCTAGCACATATTAGGCCCTACATTTAT  150

seq1  CTCCTAGGACCAAAAGCCAAAATAAAAACCAATACAGTTCCGAATTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGGACCAAAAGCCAAAATAAAAACCAATACAGTTCCGAATTTCCT  200

seq1  GTCCATAATCTTTGCATCTTTTCCCATCCATGTTAGTCAGCTTCCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATAATCTTTGCATCTTTTCCCATCCATGTTAGTCAGCTTCCTTCCA  250

seq1  CTGCAACAGATGCTTGCAGAAACTCTAAGACAGGAAGTTAACCTGGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACAGATGCTTGCAGAAACTCTAAGACAGGAAGTTAACCTGGAAGC  300

seq1  CCTACCAGCCAAGGACCAGGTTACTTCCTGGAATGTTGGGAATCATAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAGCCAAGGACCAGGTTACTTCCTGGAATGTTGGGAATCATAGTT  350

seq1  CTTGGACGAAAAACCAAGCCATATGGAAAAATACGGTAGCCATATTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACGAAAAACCAAGCCATATGGAAAAATACGGTAGCCATATTTAAA  400

seq1  AGCCCCTGAAGCACGTGTCTCAGGGCCACTCAGCCGGGAATTCCATGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGAAGCACGTGTCTCAGGGCCACTCAGCCGGGAATTCCATGGAG  450

seq1  TGGTCCTGATCAAGACCCATCCTGGTCAGTAGCTAATTAAAAGCTTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGATCAAGACCCATCCTGGTCAGTAGCTAATTAAAAGCTTGCTT  500

seq1  CAAATTTGGTTCAAAATTATGGAGCTGGTTTTCCTCCTGCAGATCTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTGGTTCAAAATTATGGAGCTGGTTTTCCTCCTGCAGATCTCAGA  550

seq1  ATTAACGGTAACTTTCGGAGGGGGATACCTACGTGAGCTGCTTCAGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACGGTAACTTTCGGAGGGGGATACCTACGTGAGCTGCTTCAGATGT  600

seq1  TGCACGCATAGCCAGCAAGCTCCACTGTTTCTGGGCTTGTGGGGAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCATAGCCAGCAAGCTCCACTGTTTCTGGGCTTGTGGGGAAAACA  650

seq1  CAGCATCATGGCTGACGGGGAGGCAGCAGTGGGGCAAGTGGCTTCCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCATGGCTGACGGGGAGGCAGCAGTGGGGCAAGTGGCTTCCCTCA  700

seq1  TGGCGGCCAGGACTGAGGGAGAGGGAGTGATAAGGGGTCCAAACAAACTA  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGCGGCCAGGACTGAGGGAGAGGGAGTGATAAAGGGTCCAAACAAACTA  750

seq1  TATCCTTAAATGACACTCCCCAATGATCACTTTCTTCTAACTAGGTCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTAAATGACACTCCCCAATGATCACTTTCTTCTAACTAGGTCTTG  800

seq1  CCTCTAAAACTTTGCAATGTCCCATTAAGTTCCAAATCCCTAAGTGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAACTTTGCAATGTCCCATTAAGTTCCAAATCCCTAAGTGGGCT  850

seq1  GATCCAGTCTCTCCCCAAAGCTGCCACCTGTGAAGATCAATG-CCTCGGA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATCCAGTCTCTCCCCAAAGCTGCCACCTGTGAAGATCAATGCCCTCGGA  900

seq1  GCCAAGCCTTCAACATGTGAACATTTGTAGACATTTAAAACCCAGTCA--  947
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GCCAAGCCTTCAACATGTGAACATTTGTAGACATTTAAAACCCAGTCACC  950

seq1  CCCCCAACACTACAGTGTCAAGTGTTACCAAATGCAGTAACTGATTCTAC  997
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  CCCCCAACACTACAGTGTCAGTTGTTACCAAATGCAGTAACTGATTCTAC  1000

seq1  AAGAAATTGTAGGCCTAACCTTTGTTAATATTTTAATTAGAAACCCGGAC  1047
       ||||| |||| |||||||||||||||||| |||||||||||| ||||||
seq2  -AGAAA-TGTAAGCCTAACCTTTGTTAATA-TTTAATTAGAAA-CCGGAC  1046

seq1  TT--ATACCTTGGTCCATCCCTTGCTTAG-CTGTACATAGATAAAGATGA  1094
      ||   |||||  || ||| || ||||||| |||||||||||  |||||||
seq2  TTTATTACCT--GTTCATTCC-TGCTTAGCCTGTACATAGAATAAGATGA  1093

seq1  TAATGAATTTTTGATGATAGACTTTTTTTTTTTTACAGGGACTGGGGATG  1144
      || || | ||||||||||||||   |||||||||||| |||||||   | 
seq2  TATTG-ACTTTTGATGATAGAC--GTTTTTTTTTACA-GGACTGGATGTC  1139

seq1  GAAGGGGAAA  1154
       |||||||||
seq2  AAAGGGGAAA  1149


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