BAC Information

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BAC

Clone NameB6Ng01-193A20
Chromosome1 (Build37)
Map Location 27,230,997 - 27,231,967
singlet/doubletsinglet
Overlap genenone
Upstream gene4931408C20Rik
Downstream geneLOC677427, LOC100040952, EG433281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193A20.bB6Ng01-193A20.g
ACCGA016131GA016132
length1,199977
definitionB6Ng01-193A20.b B6Ng01-193A20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaagaaatgcttgagatatcagcatatatgacttcaaagagta
ctccagagccatctttatcaatacagagtaggataagaattaaaaacaaa
cattttaatcaatggaatataattgaagacctgtccataactacacctga
atttgactcaagaatctacacattcatactggaagaaaaaaaatgctgtt
taattaaacagattcaattttatcacactgaacaacattttactccagat
ggacaaacatcctcaacatagaattagataacttgaatctaataatggga
atctatgtgaagggctaagacttattaacataagaaatgtctttccaaac
aggctgagaaagaaattagggaaacaacacccttctcaatagtcacaaac
aatataaaatatcttggcgtgactctaactaaagaagtgaaagatctgta
tgataaaaacttcaagtctctgaagaaagaaattaaagaagatctcagaa
gatggaaagatctcccatgctcatggattggcaggatcaacattgtaaaa
atggctatcttgccaaaagcaatctacagattcaatgcaatccccattaa
aattccaactcaattcttcaatgaattagaaggagcaatttgcaaattca
tctggaataacaaaaaacctagtatagcaaaaactcttctcaaggataaa
agaacctctggtggaatcaccatgcctaacctaaagctttactacagagc
aattgtgataaaaactgcatggtactggtatagagacagaaaagtagacc
aatggaatagaagtgaagacccagaaatgaacccacacacctatggtcac
ttgatcttcgacaagggagctaaaaccatccagtggaagaaagacagcat
tttcaacaattggtgctggcacaactggttgttatcatgtagaagaatgc
gaatagatccattttctatcttccttgtactaaggtcaaatctaggtgga
tcaggaaacttcacataaaaccagagacactgaaacttatagagagaaag
tggggaaaaggccttgaagaatatggcacagggaaaatcctgaaacggaa
caacatgcctgttgctataaagatcgagattgacaatggacttatgaact
tcaagtctgcaggcaaagacaaccatcataagtcaaaatactgcctacg

gaattctcagtatatatttcagttagtggtatttctttttaattctttca
attctgagaaatcaaaaatatggggacaggatagctctgtcatatcattt
tacttcaattacttcaataaccaatacccttggacttatttcttttaatc
tacaaatatataattaatatgataaagaaaattcattaatcacattgcat
tgctttaacactaatgtttctgtatgtgtcatttgtacaatgtcactgtt
ttctccttaatttcaatttcaacatgttcttatattacctttagttttct
taaaggacatgaataacttggacttgtagtttattttatatttaccaatt
ctattaaactcaagacctcagtatgtttcacaatgttaccagcaattctt
agactcaaataatcttttaaatgtccatccaatcattcaaaagaaaatta
tacatatataattttgccactatgaattttaattttattttatgtgttat
tttaatatataatatattataatatgctatctcatgtttatatattttga
ataaattatctaaaatataaacaacatattctttcatcaaagtttatgaa
attggctatcaaaaaactctgcctaagtataaaattatttattcaactac
aagtaatttccaaaactagtagcaatcactcagatgtcccttcccaagac
ctaggtagatgtaccttctctctggatgtatttgcttacgcatagtatat
tatgtataaggaattatattatctgtaaaatactgtttgctctatttact
cagaagtaacattcacaagatcagtacaagctgtaatagactttaatact
tatttatatgcttaaaaatactcattttcagatgttatatgtcctgtttt
tctgttactagtttatgaaaattaaaattttaccttcatgtagtatgcat
ttgaattttgctaaagagtatataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_27230997_27231967
seq2: B6Ng01-193A20.g_64_1035 (reverse)

seq1  TATACTCTTTAGCAAAA-TCAAATGCATACTACATGAAGGTAAAATTTTA  49
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATACTCTTTAGCAAAATTCAAATGCATACTACATGAAGGTAAAATTTTA  50

seq1  ATTTTCATAAACTAGTAACAGAAAAACAGGACATATAACATCTGAAAATG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATAAACTAGTAACAGAAAAACAGGACATATAACATCTGAAAATG  100

seq1  AGTATTTTTAAGCATATAAATAAGTATTAAAGTCTATTACAGCTTGTACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTAAGCATATAAATAAGTATTAAAGTCTATTACAGCTTGTACT  150

seq1  GATCTTGTGAATGTTACTTCTGAGTAAATAGAGCAAACAGTATTTTACAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGTGAATGTTACTTCTGAGTAAATAGAGCAAACAGTATTTTACAG  200

seq1  ATAATATAATTCCTTATACATAATATACTATGCGTAAGCAAATACATCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATAATTCCTTATACATAATATACTATGCGTAAGCAAATACATCCA  250

seq1  GAGAGAAGGTACATCTACCTAGGTCTTGGGAAGGGACATCTGAGTGATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGTACATCTACCTAGGTCTTGGGAAGGGACATCTGAGTGATTG  300

seq1  CTACTAGTTTTGGAAATTACTTGTAGTTGAATAAATAATTTTATACTTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGTTTTGGAAATTACTTGTAGTTGAATAAATAATTTTATACTTAG  350

seq1  GCAGAGTTTTTTGATAGCCAATTTCATAAACTTTGATGAAAGAATATGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTTTTTTGATAGCCAATTTCATAAACTTTGATGAAAGAATATGTT  400

seq1  GTTTATATTTTAGATAATTTATTCAAAATATATAAACATGAGATAGCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATTTTAGATAATTTATTCAAAATATATAAACATGAGATAGCATA  450

seq1  TTATAATATATTATATATTAAAATAACACATAAAATAAAATTAAAATTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATATTATATATTAAAATAACACATAAAATAAAATTAAAATTCA  500

seq1  TAGTGGCAAAATTATATATGTATAATTTTCTTTTGAATGATTGGATGGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCAAAATTATATATGTATAATTTTCTTTTGAATGATTGGATGGAC  550

seq1  ATTTAAAAGATTATTTGAGTCTAAGAATTGCTGGTAACATTGTGAAACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAGATTATTTGAGTCTAAGAATTGCTGGTAACATTGTGAAACAT  600

seq1  ACTGAGGTCTTGAGTTTAATAGAATTGGTAAATATAAAATAAACTACAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTCTTGAGTTTAATAGAATTGGTAAATATAAAATAAACTACAAG  650

seq1  TCCAAGTTATTCATGTCCTTTAAGAAAACTAAAGGTAATATAAGAACATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTTATTCATGTCCTTTAAGAAAACTAAAGGTAATATAAGAACATG  700

seq1  TTGAAATTGAAATTAAGGAGAAAACAGTGACATTGTACAAATGACACATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGAAATTAAGGAGAAAACAGTGACATTGTACAAATGACACATA  750

seq1  CAGAAACATTAGTGTTAAAGCAATGCAATGTGATTAATGAATTTTCTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACATTAGTGTTAAAGCAATGCAATGTGATTAATGAATTTTCTTTA  800

seq1  TCATATTAATTATATATTTGTAGATTAAAAGAAATAAGTCCAAGGGTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTAATTATATATTTGTAGATTAAAAGAAATAAGTCCAAGGGTATT  850

seq1  GGTTATTGAAGTAATTGAAGTAAAATGATATGACAGAGCTATCCTGTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGAAGTAATTGAAGTAAAATGATATGACAGAGCTATCCTGTCCC  900

seq1  CATATTTTTGATTTCTCAGAATTGAAAGAATTAAAAAGAAATACCACTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGATTTCTCAGAATTGAAAGAATTAAAAAGAAATACCACTAA  950

seq1  CTGAAATATATACTGAGAATTC  971
      ||||||||||||||||||||||
seq2  CTGAAATATATACTGAGAATTC  972


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