BAC Information

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BAC

Clone NameB6Ng01-193I08
Chromosome1 (Build37)
Map Location 38,139,826 - 38,140,914
singlet/doubletsinglet
Overlap geneRev1
Upstream gene4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik, Txndc9, EG666434, Eif5b
Downstream geneEG329123, Aff3, Lonrf2, Chst10, EG625775, Nms, Pdcl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193I08.bB6Ng01-193I08.g
ACCGA016470GA016471
length1,1111,073
definitionB6Ng01-193I08.b B6Ng01-193I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatggggttatttaaatt
tctggagtctagcttcttgagttctttgtatactttggatattaatcccc
tatctgatttaggattggtaaagatcctttcccaatctgttggtgacctt
tttgtcttattgacagtgtcttttgccttaaagaagctttgcaattttat
gaggtcccatttgtcaattctcaatcttacagcacaagccattgttgttc
tgttgaggaatttttcccctgtgcccatatctttgaggcttttccccact
ttctgctctataagtttctgtgtctctggttttatgtggagttctttgat
ccacttagacttgacctttgtacaaggagataagaatggaacaatacgca
ttcttctacatgataactgccatttgtaccagcaccatttgttgtctttt
ttccactggatggttttagctcccttgtcaaagatcaagtgaccataggt
gtgtggatccattactgggtcttcaattctattccattgatctacctgcc
tattgctgtaccagtaccatgaagtttttatcacaattgctctgtagtat
agcttgaggtcaggcatggtgatttcaccagaggttcttttattgttgag
agtaatttttgctatccaaggttttttgttactccagatgaatttgtaag
ttgccctttctaactcagtgaagaattgagttgggattttgatggggatt
gtattgaatctgtagattgcttacagcaagatagccattttgactatatt
aatcctgccaatccatgagcatgggaagatctttccatcttctgagatct
tcttcaatttctttcttcagagacttgagttcttgtcatacagatctttc
acttgcttaattagagtcatacaggtattttatatatttgtgactatgtg
acgtgtgttccctaattcctttctcagcctgttatccttgtgtagagaaa
ggccattgatttgttgaattaattttttaacagctactgcacctgaagcc
ggttatcagttagagtcctgggtgatttttagggtaaccctgcaaaagga
aatttgacatc
gaattccaggacttcctagaccctgtcttttttaaaaaaaaaaaaaaaac
ttgctgaaactgtcccttttaatgaaaatgaaaaccttaggcgagttata
tggtgatgggtatattagtttattgaagacttaatgcctatgtgattaaa
gatcaacttatgtaattaaaatctcataaaaatgtttctattacctgttc
ttaacatccttttgtacttagagaaaaaaatgtaatttttttctcacagg
aaaaccagtggctgttacaagtaacagaggcacgggaacggcgcctttgc
gtcctggtgctaacccgcagctggaatggcagtattaccagaatagagcc
ctgagaggaaaagcaggtacacacgagttcttgaacccatacgctcctat
ggatggcctcggatgttgctggtggtgttggtgctgtagaagtaaaagta
gaattagaataattagctcttccaagctgaaggctttaaggatgctagtg
acaacttgagtcaaaacaaaatctgaatctaaacagatgactggtgtata
gttattgatttctggaattggatgatggtgttttcctggaactcagtgag
gtatgatttttaaaacggtgattagtctactttttataatttaaattggg
aatgaaaagcttgattgcttcgtagaaacattgatccggataagttatta
gccatttggctcatgtcacagtaaagatactgaagattgtgttcatcagt
atttttaagaattttaaaggtagacaccatggtacctaatcccagacttt
gggagatggcaccacagcagtactttcaagggaaaggctaccgagtagga
aggacaacacctctgttggaactagaatctagatgcctcatttgagtgaa
cttgtttcttagaagaaacatcttcatagctgtcttggaaaactagactc
ttacatcatagatcctcatatgtttttatgccctgctaaagttattaaga
cctattaacctcgaaagtcttccaattagttttctgtaagtcttgtaaac
cacattttttttaatattctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_38139826_38140914
seq2: B6Ng01-193I08.g_63_1135 (reverse)

seq1  AAAAGAATTATTTTAAAAAAAAATTGTGGTTTTACAAGATACTCTACAAG  50
      ||||||| ||||    ||||||| ||||| ||||||||  ||| ||| ||
seq2  AAAAGAA-TATT----AAAAAAAATGTGG-TTTACAAG--ACT-TAC-AG  40

seq1  GAAACTAATGTGAAAGACTTTCGAGGTAAATAGTTCTTAATAACTTTAAG  100
       |||||||| || |||||||||||||| ||||| ||||||||||||||  
seq2  AAAACTAAT-TGGAAGACTTTCGAGGTTAATAGGTCTTAATAACTTTA--  87

seq1  GCAGGGCAATAAAAACATATGAAGATCTTATGATTGTAAAGAGTCTAGTT  150
      ||||||| |||||||||||||| |||| ||||| ||| ||||||||||||
seq2  GCAGGGC-ATAAAAACATATGAGGATC-TATGA-TGT-AAGAGTCTAGTT  133

seq1  TTCCAAGACAGCTATGAAGATGTTTCTTCTAAGAAACAAGTTCACTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGACAGCTATGAAGATGTTTCTTCTAAGAAACAAGTTCACTCAAA  183

seq1  TGAGGCATCTAGATTCTAGTTCCAACAGAGGTTGTGTCCTTCCTACTCGG  250
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TGAGGCATCTAGATTCTAGTTCCAACAGAGGTGTTGTCCTTCCTACTCGG  233

seq1  TAGCC-TTCCCTTGAAAGTACTGCTGTGGTGCCATCTCCCAAAGTCTGGG  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTCCCTTGAAAGTACTGCTGTGGTGCCATCTCCCAAAGTCTGGG  283

seq1  ATTAGGTACCATGGTGTCTACCTTTAAAATTCTTAAAAATACTGATGAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTACCATGGTGTCTACCTTTAAAATTCTTAAAAATACTGATGAAC  333

seq1  ACAATCTTCAGTATCTTTACTGTGACATGAGCCAAATGGCTAATAACTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTCAGTATCTTTACTGTGACATGAGCCAAATGGCTAATAACTTA  383

seq1  TCCGGATCAATGTTTCTACGAAGCAATCAAGCTTTTCATTCCCAATTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATCAATGTTTCTACGAAGCAATCAAGCTTTTCATTCCCAATTTAA  433

seq1  ATTATAAAAAGTAGACTAATCACCGTTTTAAAAATCATACCTCACTGAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAAAGTAGACTAATCACCGTTTTAAAAATCATACCTCACTGAGT  483

seq1  TCCAGGAAAACACCATCATCCAATTCCAGAAATCAATAACTATACACCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAAACACCATCATCCAATTCCAGAAATCAATAACTATACACCAG  533

seq1  TCATCTGTTTAGATTCAGATTTTGTTTTGACTCAAGTTGTCACTAGCATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTTTAGATTCAGATTTTGTTTTGACTCAAGTTGTCACTAGCATC  583

seq1  CTTAAAGCCTTCAGCTTGGAAGAGCTAATTATTCTAATTCTACTTTTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCCTTCAGCTTGGAAGAGCTAATTATTCTAATTCTACTTTTACT  633

seq1  TCTACAGCACCAACACCACCAGCAACATCCGAGGCCATCCATAGGAGCGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGCACCAACACCACCAGCAACATCCGAGGCCATCCATAGGAGCGT  683

seq1  ATGGGTTCAAGAACTCGTGTGTACCTGCTTTTCCTCTCAGGGCTCTATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTCAAGAACTCGTGTGTACCTGCTTTTCCTCTCAGGGCTCTATTC  733

seq1  TGGTAATACTGCCATTCCAGCTGCGGGTTAGCACCAGGACGCAAAGGCGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATACTGCCATTCCAGCTGCGGGTTAGCACCAGGACGCAAAGGCGC  783

seq1  CGTTCCCGTGCCTCTGTTACTTGTAACAGCCACTGGTTTTCCTGTGAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCGTGCCTCTGTTACTTGTAACAGCCACTGGTTTTCCTGTGAGAA  833

seq1  AAAAATTACATTTTTTTCTCTAAGTACAAAAGGATGTTAAGAACAGGTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACATTTTTTTCTCTAAGTACAAAAGGATGTTAAGAACAGGTAA  883

seq1  TAGAAACATTTTTATGAGATTTTAATTACATAAGTTGATCTTTAATCACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACATTTTTATGAGATTTTAATTACATAAGTTGATCTTTAATCACA  933

seq1  TAGGCATTAAGTCTTCAATAAACTAATATACCCATCACCATATAACTCGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTAAGTCTTCAATAAACTAATATACCCATCACCATATAACTCGC  983

seq1  CTAAGGTTTTCATTTTCATTAAAAGGGACAGTTTCAGCAAGTTTTTTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTTTTCATTTTCATTAAAAGGGACAGTTTCAGCAAGTTTTTTTTT  1033

seq1  TTTTTTTAAAAAAGACAGGGTCTAGGAAGTCCTGGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAAAGACAGGGTCTAGGAAGTCCTGGAATTC  1073