BAC Information

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BAC

Clone NameB6Ng01-194G08
Chromosome1 (Build37)
Map Location 155,576,113 - 155,704,128
singlet/doubletdoublet
Overlap geneRgs16, Rnasel, LOC100043347, Rgsl1, 5830403L16Rik
Upstream geneEG639787, Apobec4, Arpc5, Ncf2, Smg7, EG668097, Nmnat2, Lamc2, Lamc1, EG667795, EG626058, 1700012A16Rik, Dhx9, Npl, LOC626096, Rgs8
Downstream geneEG433365, Teddm1, LOC100043357, Glul, LOC100043359, Cacna1e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194G08.bB6Ng01-194G08.g
ACCGA017103GA017104
length1,153937
definitionB6Ng01-194G08.b B6Ng01-194G08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,702,956 - 155,704,128)(155,576,113 - 155,577,045)
sequence
gaattccaggacagccagggctacacagagaaaccctgtcttgaaacaca
aaaaaataaaaagagaacaaacaacaacacaaagtttccaagcccgtgaa
aattttatagcccagatcatccaaagtgcgttaactcatagatttgtgtg
aaacaaatgaaatattttctatagagtgtttagctttgtgaaatgttaaa
actgttaatcatacactttattgtggcatttcccatagtttctttactaa
tgaatatcagactctccccccaaaaaccacacattagatcacttggccag
aacatactgcttccaaacaaatactatagtagttttatttctaatattat
gaagaaaactgatatatttgctcactaggtgcctaataaccaacatatca
ttagtcaataaacaacatctcatcagccaacagactttcccccagaggta
cccaccctcagtgcaaacactgccggtgtgatctcagcgaagacctcgtc
tctgaaaagaatattttaattttgacacttgtaagtgaattagggaattc
agagggaatgcacacactttgaaaaggagaaaaatggaagaccttcccaa
aattgcccagatgataccagaactctatctagtctacccgggtcggaagg
ggcacacgaccttgagcccaggcaagcgctccctttcatatcttttaatt
acttttcttctttccctagagccagcttcccttatgatctgcacgggagg
aaatctccttcccataggctgtttgggctgcctggaatccacgtggatcc
tggacccacatcttaccacatcttcagagttgctgccagggaccagatgg
cctggcatgagatctgagactcggtaccctttgctgattgcaacattagc
cccttctccctgaggggtcactgagggtgaggagctgggagatttctcct
catccacgcactaatcagtgactcgtgaggaagtcaggtgacaggaccca
gagggatcatcatacaggcgatgccaaggacatacagactactattgggc
atctatgccagagaggatttgagaactctgaaattttgtctttctgcatg
tgatcctttgccctgcaccctccctcacaacctttccaccagaaaacctc
cta
gaattccagaacccacccaaagctgtggcactcatgtctataagctcagt
gctcttacatagcaggtgggaggtggagacaggagattctctggaagctc
acaggccagctaacgagtagtctatgcagtgatgaaaaaagggatctgga
ctcaaacaaggtaagattagcatctaaggttgtcctttgacttgcacaag
tgcatgcgtgcgcacgaacacacacacacacacacacactaaatgagtga
atgaatgaatgaatgataagagtgggtagtttacagtatcctctatgccc
taccacccttcatactcagtggactgggaactcctgcagctgtgtgtctg
tccaacacagatttcatagcagcatgggtggtaataaggcagaccccgct
gggcctttgaatcagagcttggtggttcaaagaggagggatggtagagga
tccactttgtggacagaggtagctaccacatccagttttctagggccagc
caaggctggggggacacttggggagtgtctccactgcttggctgtggagg
aggcttaggtgtctagcccaaaggcctagtacctgctgtgcctcatcgaa
gtggttttgtggaggagtttcactgccttgctttgttcttatgttttctg
aaccacccagaaaattttgtgggctatccaaaactcatacatatttctct
ttgagttagaagaaagcctgtctttctttatccttagagactccatcagt
tccctcctcagaatgcctcatgggggggggtgctcccttcacttctacct
tctttacggcattaatcaactattagtgatatgtgatatttcctcagtcc
ctctcagtcccaatcctcactgttgagaatgcaagtcagtcttatggtat
tattctgtctatgacctgcttagctgcttggcagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_155702956_155704128
seq2: B6Ng01-194G08.b_44_1196 (reverse)

seq1  TAGGA-GATTTCTGGTGGAAAGGGTTGTTGAGGGAGGGTGCAGGGGCAAG  49
      ||||| | ||||||||||||| ||||| |||||||||||||| |||||| 
seq2  TAGGAGGTTTTCTGGTGGAAA-GGTTG-TGAGGGAGGGTGCA-GGGCAAA  47

seq1  AGATCACATTGGCAGAATAGGACAAAAAATTTTCAAGAGTTCTCAAATTC  99
       ||||||||  |||||  | |||||||   |||| |||||||||||| ||
seq2  GGATCACAT--GCAGA--AAGACAAAA---TTTC-AGAGTTCTCAAA-TC  88

seq1  CTCTCTGGCATAGATGGCCCAATAGGTAAGTCCTGTATGTCCTTGGCATC  149
      ||||||||||||||| |||||||||   ||| ||||||||||||||||||
seq2  CTCTCTGGCATAGAT-GCCCAATAG--TAGT-CTGTATGTCCTTGGCATC  134

seq1  GGCCTGTATGATGATTCCCTCTGGGTCCTTGTCACCTGACTTCCTCACGA  199
       ||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  -GCCTGTATGATGA-TCCCTCTGGGTCC-TGTCACCTGACTTCCTCACGA  181

seq1  GTCACTGATTAGTGCGTGGATGAGGAGAAATCTCCCAGCTCCTCACCCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGATTAGTGCGTGGATGAGGAGAAATCTCCCAGCTCCTCACCCTC  231

seq1  AGTGACCCCTCAGGGAGAAGGGGCTAAATGTTTGCAATCAGCAAAGGGTA  299
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  AGTGACCCCTCAGGGAGAAGGGGCT-AATG-TTGCAATCAGCAAAGGGTA  279

seq1  CCGAGTCTCAGATCTCATGCCAGGCCATCTGGTCCCTGGCAGCAACTCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCTCAGATCTCATGCCAGGCCATCTGGTCCCTGGCAGCAACTCTG  329

seq1  AAGATGTGGTAAGATGTGGGTCCAGGATCCACGTGGATTCCAGGCAGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTGGTAAGATGTGGGTCCAGGATCCACGTGGATTCCAGGCAGCCC  379

seq1  AAACAGCCTATGGGAAGGAGATTTCCTCCCGTGCAGATCATAAGGGAAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCCTATGGGAAGGAGATTTCCTCCCGTGCAGATCATAAGGGAAGC  429

seq1  TGGCTCTAGGGAAAGAAGAAAAGTAATTAAAAGATATGAAAGGGAGCGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAGGGAAAGAAGAAAAGTAATTAAAAGATATGAAAGGGAGCGCT  479

seq1  TGCCTGGGCTCAAGGTCGTGTGCCCCTTCCGACCCGGGTAGACTAGATAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGCTCAAGGTCGTGTGCCCCTTCCGACCCGGGTAGACTAGATAG  529

seq1  AGTTCTGGTATCATCTGGGCAATTTTGGGAAGGTCTTCCATTTTTCTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGTATCATCTGGGCAATTTTGGGAAGGTCTTCCATTTTTCTCCT  579

seq1  TTTCAAAGTGTGTGCATTCCCTCTGAATTCCCTAATTCACTTACAAGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTGTGTGCATTCCCTCTGAATTCCCTAATTCACTTACAAGTGT  629

seq1  CAAAATTAAAATATTCTTTTCAGAGACGAGGTCTTCGCTGAGATCACACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAAAATATTCTTTTCAGAGACGAGGTCTTCGCTGAGATCACACC  679

seq1  GGCAGTGTTTGCACTGAGGGTGGGTACCTCTGGGGGAAAGTCTGTTGGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTTTGCACTGAGGGTGGGTACCTCTGGGGGAAAGTCTGTTGGCT  729

seq1  GATGAGATGTTGTTTATTGACTAATGATATGTTGGTTATTAGGCACCTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGATGTTGTTTATTGACTAATGATATGTTGGTTATTAGGCACCTAG  779

seq1  TGAGCAAATATATCAGTTTTCTTCATAATATTAGAAATAAAACTACTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAATATATCAGTTTTCTTCATAATATTAGAAATAAAACTACTATA  829

seq1  GTATTTGTTTGGAAGCAGTATGTTCTGGCCAAGTGATCTAATGTGTGGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTTTGGAAGCAGTATGTTCTGGCCAAGTGATCTAATGTGTGGTT  879

seq1  TTTGGGGGGAGAGTCTGATATTCATTAGTAAAGAAACTATGGGAAATGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGAGAGTCTGATATTCATTAGTAAAGAAACTATGGGAAATGCC  929

seq1  ACAATAAAGTGTATGATTAACAGTTTTAACATTTCACAAAGCTAAACACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAGTGTATGATTAACAGTTTTAACATTTCACAAAGCTAAACACT  979

seq1  CTATAGAAAATATTTCATTTGTTTCACACAAATCTATGAGTTAACGCACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAAAATATTTCATTTGTTTCACACAAATCTATGAGTTAACGCACT  1029

seq1  TTGGATGATCTGGGCTATAAAATTTTCACGGGCTTGGAAACTTTGTGTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGATCTGGGCTATAAAATTTTCACGGGCTTGGAAACTTTGTGTTG  1079

seq1  TTGTTTGTTCTCTTTTTATTTTTTTGTGTTTCAAGACAGGGTTTCTCTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTCTCTTTTTATTTTTTTGTGTTTCAAGACAGGGTTTCTCTGT  1129

seq1  GTAGCCCTGGCTGTCCTGGAATTC  1173
      ||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGTCCTGGAATTC  1153

seq1: chr1_155576113_155577045
seq2: B6Ng01-194G08.g_66_1002

seq1  GAATTCCAGAACCCACCCAAAGCTGTGGCACTCATGTCTATAAGCTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACCCACCCAAAGCTGTGGCACTCATGTCTATAAGCTCAGT  50

seq1  GCTCTTACATAGCAGGTGGGAGGTGGAGACAGGAGATTCTCTGGAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTACATAGCAGGTGGGAGGTGGAGACAGGAGATTCTCTGGAAGCTC  100

seq1  ACAGGCCAGCTAACGAGTAGTCTATGCAGTGATGAAAAAAGGGATCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAGCTAACGAGTAGTCTATGCAGTGATGAAAAAAGGGATCTGGA  150

seq1  CTCAAACAAGGTAAGATTAGCATCTAAGGTTGTCCTTTGACTTGCACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACAAGGTAAGATTAGCATCTAAGGTTGTCCTTTGACTTGCACAAG  200

seq1  TGCATGCGTGCGCACGAACACACACACACACACACACACTAAATGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCGTGCGCACGAACACACACACACACACACACACTAAATGAGTGA  250

seq1  ATGAATGAATGAATGATAAGAGTGGGTAGTTTACAGTATCCTCTATGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAATGAATGATAAGAGTGGGTAGTTTACAGTATCCTCTATGCCC  300

seq1  TACCACCCTTCATACTCAGTGGACTGGGAACTCCTGCAGCTGTGTGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACCCTTCATACTCAGTGGACTGGGAACTCCTGCAGCTGTGTGTCTG  350

seq1  TCCAACACAGATTTCATAGCAGCATGGGTGGTAATAAGGCAGACCCCGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACAGATTTCATAGCAGCATGGGTGGTAATAAGGCAGACCCCGCT  400

seq1  GGGCCTTTGAATCAGAGCTTGGTGGTTCAAAGAGGAGGGATGGTAGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTTGAATCAGAGCTTGGTGGTTCAAAGAGGAGGGATGGTAGAGGA  450

seq1  TCCACTTTGTGGACAGAGGTAGCTACCACATCCAGTTTTCTAGGGCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTGTGGACAGAGGTAGCTACCACATCCAGTTTTCTAGGGCCAGC  500

seq1  CAAGGCTGGGGGGACACTTGGGGAGTGTCTCCACTGCTTGGCTGTGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGGGGGGACACTTGGGGAGTGTCTCCACTGCTTGGCTGTGGAGG  550

seq1  AGGCTTAGGTGTCTAGCCCAAAGGCCTAGTACCTGCTGTGCCTCATCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAGGTGTCTAGCCCAAAGGCCTAGTACCTGCTGTGCCTCATCGAA  600

seq1  GTGGTTTTGTGGAGGAGTTTCACTGCCTTGCTTTGTTCTTATGTTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTGTGGAGGAGTTTCACTGCCTTGCTTTGTTCTTATGTTTTCTG  650

seq1  AACCACCCAGAAAATTTTGTGGGCTATCCAAAACTCATACATATTTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCAGAAAATTTTGTGGGCTATCCAAAACTCATACATATTTCTCT  700

seq1  TTGAGTTAGAAGAAAGCCTGTCTTTCTTTATCCTTAGAGACTCCATCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAGAAGAAAGCCTGTCTTTCTTTATCCTTAGAGACTCCATCAGT  750

seq1  TCCCTCCTCAGAATGCCTCATGGGGGGGGGTGCTCCCTTCAACTTCTACC  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCCTCCTCAGAATGCCTCATGGGGGGGGGTGCTCCCTTC-ACTTCTACC  799

seq1  TTCTTTACGGCATTAATCAACTATTAGTGATATGTGATATTTCCTCAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACGGCATTAATCAACTATTAGTGATATGTGATATTTCCTCAGTC  849

seq1  CCTCTCAGTCCCAA-CCTCACTG-TGAGAATGCAGGTCAGTCTAAGGGTA  898
      |||||||||||||| |||||||| |||||||||| |||||||| | ||||
seq2  CCTCTCAGTCCCAATCCTCACTGTTGAGAATGCAAGTCAGTCTTATGGTA  899

seq1  -TATTCTGTC-AGGGCCTGC-TAGCTGCTTGGCAGAGC  933
       ||||||||| | | ||||| |||||||||||||||||
seq2  TTATTCTGTCTATGACCTGCTTAGCTGCTTGGCAGAGC  937