BAC Information

Click to search

BAC

Clone NameB6Ng01-194G15
Chromosome1 (Build37)
Map Location 163,814,680 - 163,815,717
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650, LOC100039623, LOC269134, Fasl, AI848100, EG665109
Downstream genePigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc, Bat2d, Fmo4, Fmo1, Fmo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194G15.bB6Ng01-194G15.g
ACCGA017117GA017118
length1,1371,040
definitionB6Ng01-194G15.b B6Ng01-194G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacttggatagctgttgcttaccaccacagtgtgagcgctgcta
ttatacctttatggatatcttgtcataccataggtcattgtgattcacag
ctatcacagctaggcaggagaacttattgcaccccctaccttcgctactc
acatagtacttgctggtattgtggaacctagactcctggaaggatgcttt
caggctagatacaactttagtagtcaagtcctctgtcctaagtatgtagt
attttaagcaatatgggcttaccttcaatccctctgtgaggacacccaag
gcaacaatagcctggattgttttgggagtcatttgggtccctctgacaaa
ccactccaaaggcagtgtctcatgactggtagttaggagttttgttagtc
tgtggttcttgtgagagcattgtcaggccaaacgtatgccatgtgttctg
tattcatccacctactggttcaatattgattgttgtgaacagtgctgcag
taaacacagatgcacaaggtctctgtgacatgttcaagttaccgtccctt
ttggtatttatctagggtggtggctacacatataacagttcagtttccat
ttttgaggaaacttcgcactgatttccacaagggcagccccagtttacat
ccccaccaacactgcccagggatcccttcccctgcacactcatcaacact
tcctgttactctgttttaaatgacacacatactcactgggcggcatggaa
tctcagtgtaattttaactgcatttcctttgatgactacagatgcggaac
tcttttgggtttcttggccacatgtatgtccttcatcttttgagacctgt
ctgttcttgtcatttaggcctttttattggttgcgttgtttggaggtttt
taatatctagctattatcatttaggtagcctttgctgttaataccccgac
agatatatagccagcaaagagtttttggtcccactctacaggttgattct
ccatgccctggttgcccctttctcttgcagaagcttcattattgatttac
tttccctgaattcacttaaaggtcttttcagatatcccttcacatactct
ctctatttcggaagtgttttctctttaccaagtgacg
gaattctggaccagctggaattacagtaagtgactctcaaaaatacaaaa
ccatttttaaaaagaaaaaataatcactttaaaaaatatatcagagtatg
tctcagtactggggatggtttttcttggcactcctatttcagttgtgtgt
gtgcgtgtgatatattcatatatatatatatatgaatatatatatatata
tgaatgaaattgtgttgcagtgtaagaatgtgtctaattatgggttgcac
tcaaaataatgtgaaagcatcttcagaaggagaaatgagatgtgtaagac
atgttgaataaaggccaaatgatattaatagcaggtaccacaagattaag
ggaaaagtaaagtcattttttcatttgaggggaaaaggagataatgtatt
taagatagtccttactaaatgaggtaaagctgaagatacaggaagtcagt
aactcacttgccttcaatcatggggatgactatgccccccagaacacaag
ttttttaaagtagctggttgtaaggcatggcttgtcagccagcactggaa
aagcagaggcagtgtgctactagaggccactggctagccagcctggccta
ctcatcttcagaccagtgagaagttttttgttgttgttgtttttttaatg
actatggaatctaattaagtacatccaaagttgttctttggcctctgtac
acacacacacacacacacacacacacacacacacacacacacacgctggt
tgggaggagagagaggattttcaaagaaataaggacacagtgtcttagac
actggggacagttaagcctttagaacctacgaaaaagtaacatcaataat
ctagatcacatggctttaattctagtttccctatttgggtactttatgtt
ggggaaaacttagtgatgggtgaactgtaatcaactatttatgggggcac
cttgtataagcattttagttccagggaagattttaagatgtcatccttct
agtggactagacaagaattacttacattttttaaaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_163814680_163815717
seq2: B6Ng01-194G15.g_65_1104

seq1  GAATTCTGGACCAGCTGGAATTACAGTAAGTGACTCTCAAAAATACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACCAGCTGGAATTACAGTAAGTGACTCTCAAAAATACAAAA  50

seq1  CCATTTTTAAAAAGAAAAAATAATCACTTTAAAAAATATATCAGAGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTAAAAAGAAAAAATAATCACTTTAAAAAATATATCAGAGTATG  100

seq1  TCTCAGTACTGGGGATGGTTTTTCTTGGCACTCCTATTTCAGTTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTACTGGGGATGGTTTTTCTTGGCACTCCTATTTCAGTTGTGTGT  150

seq1  GTGCGTGTGATATATTCATATATATATATATATGAATATATATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTGTGATATATTCATATATATATATATATGAATATATATATATATA  200

seq1  TGAATGAAATTGTGTTGCAGTGTAAGAATGTGTCTAATTATGGGTTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAAATTGTGTTGCAGTGTAAGAATGTGTCTAATTATGGGTTGCAC  250

seq1  TCAAAATAATGTGAAAGCATCTTCAGAAGGAGAAATGAGATGTGTAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAATGTGAAAGCATCTTCAGAAGGAGAAATGAGATGTGTAAGAC  300

seq1  ATGTTGAATAAAGGCCAAATGATATTAATAGCAGGTACCACAAGATTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAATAAAGGCCAAATGATATTAATAGCAGGTACCACAAGATTAAG  350

seq1  GGAAAAGTAAAGTCATTTTTTCATTTGAGGGGAAAAGGAGATAATGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGTAAAGTCATTTTTTCATTTGAGGGGAAAAGGAGATAATGTATT  400

seq1  TAAGATAGTCCTTACTAAATGAGGTAAAGCTGAAGATACAGGAAGTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTCCTTACTAAATGAGGTAAAGCTGAAGATACAGGAAGTCAGT  450

seq1  AACTCACTTGCCTTCAATCATGGGGATGACTATGCCCCCCAGAACACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTGCCTTCAATCATGGGGATGACTATGCCCCCCAGAACACAAG  500

seq1  TTTTTTAAAGTAGCTGGTTGTAAGGCATGGCTTGTCAGCCAGCACTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAGTAGCTGGTTGTAAGGCATGGCTTGTCAGCCAGCACTGGAA  550

seq1  AAGCAGAGGCAGTGTGCTACTAGAGGCCACTGGCTAGCCAGCCTGGCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGGCAGTGTGCTACTAGAGGCCACTGGCTAGCCAGCCTGGCCTA  600

seq1  CTCATCTTCAGACCAGTGAGAAGTTTTTTGTTGTTGTTGTTTTTTTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTCAGACCAGTGAGAAGTTTTTTGTTGTTGTTGTTTTTTTAATG  650

seq1  ACTATGGAATCTAATTAAGTACATCCAAAGTTGTTCTTTGGCCTCTGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGAATCTAATTAAGTACATCCAAAGTTGTTCTTTGGCCTCTGTAC  700

seq1  ACACACACACACACACACACACACACACACACACACACACACACGCTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACGCTGGT  750

seq1  TGGGAGGAGAGAGAGGATTTTCAAAGAAATAAGGACACAGTGTCTTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGAGAGAGGATTTTCAAAGAAATAAGGACACAGTGTCTTAGAC  800

seq1  ACTGGGGACAGTTAAGCC-TTAGAACCTACGAAAAAGTAACATCAATAAT  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTGGGGACAGTTAAGCCTTTAGAACCTACGAAAAAGTAACATCAATAAT  850

seq1  CTAGATCACATGGCTTTTAATTCTAGTTTCCCTATTT-GGTACTTTATGT  898
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  CTAGATCACATGGC-TTTAATTCTAGTTTCCCTATTTGGGTACTTTATGT  899

seq1  TTGGGAAAACTTAGTGAT-GGTGAACTGTAATCAACTATTTAT-GGGGCA  946
      | |||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  TGGGGAAAACTTAGTGATGGGTGAACTGTAATCAACTATTTATGGGGGCA  949

seq1  CCTTGTATAAAGCATTTTAGTTCAAGGGAAGATTTTAAAGATGTCAT-CT  995
      |||||||| |||||||||||||| |||||||||||| |||||||||| ||
seq2  CCTTGTAT-AAGCATTTTAGTTCCAGGGAAGATTTT-AAGATGTCATCCT  997

seq1  TCTAGTGGACTAGACAAGAA-TATTTAAATTTTTTTAAAATGCA  1038
      |||||||||||||||||||| || ||| | ||||||||||||||
seq2  TCTAGTGGACTAGACAAGAATTACTTACA-TTTTTTAAAATGCA  1040