BAC Information

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BAC

Clone NameB6Ng01-195O22
Chromosome1 (Build37)
Map Location 38,016,482 - 38,140,914
singlet/doubletdoublet
Overlap geneTxndc9, EG666434, Eif5b, Rev1
Upstream geneA230074B11Rik, 4921511C04Rik, Cnga3, Inpp4a, 6330578E17Rik, Unc50, Mgat4a, 2010300C02Rik, Tsga10, EG623661, Mitd1, Mrpl30, Gm776, 2300002O18Rik
Downstream geneEG329123, Aff3, Lonrf2, Chst10, EG625775, Nms, Pdcl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195O22.bB6Ng01-195O22.g
ACCGA018215GA018216
length829469
definitionB6Ng01-195O22.b B6Ng01-195O22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,140,097 - 38,140,914)(38,016,482 - 38,016,956)
sequence
gaattccaggacttcctagaccctgtcttttttaaaaaaaaaaaaaaaac
ttgctgaaactgtcccttttaatgaaaatgaaaaccttaggcgagttata
tggtgatgggtatattagtttattgaagacttaatgcctatgtgattaaa
gatcaacttatgtaattaaaatctcataaaaatgtttctattacctgttc
ttaacatccttttgtacttagagaaaaaaatgtaatttttttctcacagg
aaaaccagtggctgttacaagtaacagaggcacgggaacggcgcctttgc
gtcctggtgctaacccgcagctggaatggcagtattaccagaatagagcc
ctgagaggaaaagcaggtacacacgagttcttgaacccatacgctcctat
ggatggcctcggatgttgctggtggtgttggtgctgtagaagtaaaagta
gaattagaataattagctcttccaagctgaaggctttaaggatgctagtg
acaacttgagtcaaaacaaaatctgaatctaaacagatgactggtgtata
gttattgatttctggaattggatgatggtgttttcctggaactcagtgag
gtatgatttttaaaacggtgattagtctactttttataatttaaattggg
aatgaaaagcttgattgcttcgtagaaacattgatccggataagtattag
ccatttggctcattgtcacagtaaagatacttgaaagattgtgttcatca
gtattttaggatttttaaagggtaggacaccattggtaacctaattctca
gactttttggggagtatgggcaccacagc
tctggccccagctacaaagacagcacaccatcaacaccaagggcatgctg
gcgtcctagaaatgtgtctctggtcagtagccagcttgttgcctggcaac
agctccacagaaatgatgcccgtccctatccccaggtttgctctgttctt
agccagttcttttgtgtatagccttcctttcaaagatctaatttacacta
aaaaacatctgtccctagacaaagggaggaacccagatgcccagtgtgtg
gaggtcgatatggcaaagaaaatgtagctgggcttagtgacccgtactgt
agttccagctactgggaagggggaggcaggagtatagcttgagcccagat
gttcaagggcagtctgggcagcatagtgaggccctacctcagaagtgaat
gaaagagagagggaagagaggagaggaagagagagaagaggaagagagag
gagaggagaggagaggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_38140097_38140914
seq2: B6Ng01-195O22.b_48_876 (reverse)

seq1  GCTGTGGTG-CCAT-CTCCC---AAAGTCTG-GGATTAGG-TACC-ATGG  42
      ||||||||| |||| |||||   |||||||| | |||||| |||| ||||
seq2  GCTGTGGTGCCCATACTCCCCAAAAAGTCTGAGAATTAGGTTACCAATGG  50

seq1  TGT-CTA-CCTTTAAAATTCTTAAAAATACTGATGAACACAATCTT--CA  88
      ||| ||| ||||||||| || | |||||||||||||||||||||||   |
seq2  TGTCCTACCCTTTAAAAATCCT-AAAATACTGATGAACACAATCTTTCAA  99

seq1  GTATCTTTACTGTGAC-ATGAGCCAAATGGCTAATAACTTATCCGGATCA  137
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  GTATCTTTACTGTGACAATGAGCCAAATGGCTAAT-ACTTATCCGGATCA  148

seq1  ATGTTTCTACGAAGCAATCAAGCTTTTCATTCCCAATTTAAATTATAAAA  187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTACGAAGCAATCAAGCTTTTCATTCCCAATTTAAATTATAAAA  198

seq1  AGTAGACTAATCACCGTTTTAAAAATCATACCTCACTGAGTTCCAGGAAA  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACTAATCACCGTTTTAAAAATCATACCTCACTGAGTTCCAGGAAA  248

seq1  ACACCATCATCCAATTCCAGAAATCAATAACTATACACCAGTCATCTGTT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCATCCAATTCCAGAAATCAATAACTATACACCAGTCATCTGTT  298

seq1  TAGATTCAGATTTTGTTTTGACTCAAGTTGTCACTAGCATCCTTAAAGCC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCAGATTTTGTTTTGACTCAAGTTGTCACTAGCATCCTTAAAGCC  348

seq1  TTCAGCTTGGAAGAGCTAATTATTCTAATTCTACTTTTACTTCTACAGCA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTGGAAGAGCTAATTATTCTAATTCTACTTTTACTTCTACAGCA  398

seq1  CCAACACCACCAGCAACATCCGAGGCCATCCATAGGAGCGTATGGGTTCA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCACCAGCAACATCCGAGGCCATCCATAGGAGCGTATGGGTTCA  448

seq1  AGAACTCGTGTGTACCTGCTTTTCCTCTCAGGGCTCTATTCTGGTAATAC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCGTGTGTACCTGCTTTTCCTCTCAGGGCTCTATTCTGGTAATAC  498

seq1  TGCCATTCCAGCTGCGGGTTAGCACCAGGACGCAAAGGCGCCGTTCCCGT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCCAGCTGCGGGTTAGCACCAGGACGCAAAGGCGCCGTTCCCGT  548

seq1  GCCTCTGTTACTTGTAACAGCCACTGGTTTTCCTGTGAGAAAAAAATTAC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTTACTTGTAACAGCCACTGGTTTTCCTGTGAGAAAAAAATTAC  598

seq1  ATTTTTTTCTCTAAGTACAAAAGGATGTTAAGAACAGGTAATAGAAACAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTCTAAGTACAAAAGGATGTTAAGAACAGGTAATAGAAACAT  648

seq1  TTTTATGAGATTTTAATTACATAAGTTGATCTTTAATCACATAGGCATTA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAGATTTTAATTACATAAGTTGATCTTTAATCACATAGGCATTA  698

seq1  AGTCTTCAATAAACTAATATACCCATCACCATATAACTCGCCTAAGGTTT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAATAAACTAATATACCCATCACCATATAACTCGCCTAAGGTTT  748

seq1  TCATTTTCATTAAAAGGGACAGTTTCAGCAAGTTTTTTTTTTTTTTTTAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCATTAAAAGGGACAGTTTCAGCAAGTTTTTTTTTTTTTTTTAA  798

seq1  AAAAGACAGGGTCTAGGAAGTCCTGGAATTC  818
      |||||||||||||||||||||||||||||||
seq2  AAAAGACAGGGTCTAGGAAGTCCTGGAATTC  829

seq1: chr1_38016482_38016956
seq2: B6Ng01-195O22.g_65_539

seq1  GAATTCTCTGGCCCCAGCTACAAAGACAGCACACCATCAACACCAAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCCCCAGCTACAAAGACAGCACACCATCAACACCAAGGGC  50

seq1  ATGCTGGCGTCCTAGAAATGTGTCTCTGGTCAGTAGCCAGCTTGTTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCGTCCTAGAAATGTGTCTCTGGTCAGTAGCCAGCTTGTTGCCT  100

seq1  GGCAACAGCTCCACAGAAATGATGCCCGTCCCTATCCCCAGGTTTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGCTCCACAGAAATGATGCCCGTCCCTATCCCCAGGTTTGCTCT  150

seq1  GTTCTTAGCCAGTTCTTTTGTGTATAGCCTTCCTTTCAAAGATCTAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAGCCAGTTCTTTTGTGTATAGCCTTCCTTTCAAAGATCTAATTT  200

seq1  ACACTAAAAAACATCTGTCCCTAGACAAAGGGAGGAACCCAGATGCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAAAAACATCTGTCCCTAGACAAAGGGAGGAACCCAGATGCCCAG  250

seq1  TGTGTGGAGGTCGATATGGCAAAGAAAATGTAGCTGGGCTTAGTGACCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGAGGTCGATATGGCAAAGAAAATGTAGCTGGGCTTAGTGACCCG  300

seq1  TACTGTAGTTCCAGCTACTGGGAAGGGGGAGGCAGGAGTATAGCTTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAGTTCCAGCTACTGGGAAGGGGGAGGCAGGAGTATAGCTTGAGC  350

seq1  CCAGATGTTCAAGGGCAGTCTGGGCAGCATAGTGAGGCCCTACCTCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTTCAAGGGCAGTCTGGGCAGCATAGTGAGGCCCTACCTCAGAA  400

seq1  GTGAATGAAAGAGAGAGGGAAGAGAGGAGAGGAAGAGAGAGAAGAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGAAAGAGAGAGGGAAGAGAGGAGAGGAAGAGAGAGAAGAGGAAG  450

seq1  AGAGAGGAGAGGAGAGGAGAGGAGA  475
      ||||||||||||||||||||||| |
seq2  AGAGAGGAGAGGAGAGGAGAGGATA  475