BAC Information

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BAC

Clone NameB6Ng01-196B15
Chromosome1 (Build37)
Map Location 148,876,936 - 148,878,106
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196B15.bB6Ng01-196B15.g
ACCGA018334GA018335
length1,1661,163
definitionB6Ng01-196B15.b B6Ng01-196B15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttttctctttcagacatgtaagataaaaggatggatcttaga
actgtaggctcttagagaagtgcttttatcccattttacctgtttagcca
ttttgctagcccagatgatctatttcaaatataaagctggtatatatttt
ggtacagataggggcagatgaaattctctcattctaatcactgtgttata
tgtattttataaatctcatcttacacataatggataatcatcaataagat
tggaatataaatcttctggaattgaattttttaccttcttgcatatgata
gacattggcatttgtggggttacatgtgtaggggtatacttacacagtga
ggcctttgtgtgaaggccagagtttgtctttacctcatgatctctgagat
tatagctagaactccatgtgcaaagtgatttttttttgtgggtttatgca
ccctaaccccaggctctcatgattgctgaacccatgctctctccacttag
ccatcccgtcagttgtcaaaaatatttgaaattaatggaacaggagggat
gaaggtgtgtggccttgtaggaggagatgtgtcactggagatagactttg
aggccttaaaagcccatgccaaacccaccatcgttctctctgccctttcc
ttgtggatcagatgtggattgccaaccattgttctactctcgtgactact
tctctgatatcaggcttcctactatgatgatcatgggatccctatctaaa
actttaagcaagctcctaattaaatgctttcttttataagtcaacttggt
cacggtgtgtgtctctaagggaggtaaaaggaactaaaacaaaaacaaag
ggcatcctttcaaatctatgttatttattttctaaaggtgtacttaggcc
attatttgtctggtggttagagttgatgctacaaaacattgaaaacatgt
cctttaagacagggtatacagacaacaggccacgatagtactctgtggcc
tgtttcagctcagattggcttcactgcttccaaatatacagagtgcatag
gcagggccataacaccctttcttcttagtgaatctttcaaataatcataa
taattcataatctccacatcaaaatacattgactatgggattaagtatgg
taagaagaacttgctc
gaattctttgtttagctatgttccccatttttaatagggttatttggttc
tctggagtctaaattattctattggatatagccctctttcagatgtaggg
ttgataaagatattttcccaatctgttggtgacagttttatcctatttac
agtgtcctttgccttacagaagatttgcaattttgtgaggtcccatttgt
caattcttgatcttagagcataagccattggtgttctcttcaggaaactt
tcctctgtgcccatgtgtttgaggctcttccccattttctcttctattag
tttcagtgtatcttgttttatgtggaggtccttgatccacttgcccttga
gttttgtatcaggagataggaatggatagatttgcattcttctacatgct
aatcacaagttgaaccagtaccatttgttgaaatgctgccttttttcact
ggattgctttagctcttttgttaaagatcaagtgaccatagttgtatggg
ttcatttctgggtcttcatctcagttccactcagtttctacctgcctgtc
tctgttccaataccatgcaatttttatcactattgttctgtaatacagct
tgaggtcaagattgatgattcctcccagaagttcatttattgttgagaat
agtttttgctatcctggggtttttgttattccagatgaatttgcaaattg
ttcttttgaactctatgaagaattgagttggaattttgatggggattgca
gtgaatctgtggattgctttcagcaagatagccatttttactatagtaat
cctgacaattcatgggcacagaagatccttccatctcctggggatcttca
gtttctcttatcagaagttcttgtcatacagatctttgacttgcttggtt
tacattcacaccagttctttatagtatttgtgactattgtgaaggtgatg
tttccctaatttctttctcagctgttatcctgaaaagaagaagctactga
ttgtttgagtatttctatcagccacttgctgagtggtttatcatctttag
gagtcttctagtcatttggggtcacttagttacctattatatcaatctgc
agatgggaatttgactctcttctaattatcttcgacctctattctggact
aacttgccctcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148876936_148878106
seq2: B6Ng01-196B15.b_43_1208 (reverse)

seq1  GAGCATGTTCTTCTCTAACACATACTTTAT-CCATAGTTCAATGTATTTT  49
      ||||| |||||||| ||   ||||||| || |||||| |||||||| |||
seq2  GAGCAAGTTCTTCT-TA--CCATACTTAATCCCATAG-TCAATGTA-TTT  45

seq1  TGATGT-GAGATTAATGATTTATTATGAATAATTTGAAAGATTCACTAAG  98
      |||||| |||||| |||| |||||||| || |||||||||||||||||||
seq2  TGATGTGGAGATT-ATGAATTATTATG-ATTATTTGAAAGATTCACTAAG  93

seq1  -AGAAAGGGTGTTATTGCCCTGCCTATGCACTCCTGTATATTTGGAAGCA  147
       |||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  AAGAAAGGGTGTTATGGCCCTGCCTATGCACT-CTGTATATTTGGAAGCA  142

seq1  GTGAAGCCAATCTGAGCTGAAACA-GCCACAGAGTACTATCGTGGCCTGT  196
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  GTGAAGCCAATCTGAGCTGAAACAGGCCACAGAGTACTATCGTGGCCTG-  191

seq1  TTGTCTGTATACCCTGTCTT-AAGGACATGTTTTCAATGTTTTGTAGCAT  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGTCTGTATACCCTGTCTTAAAGGACATGTTTTCAATGTTTTGTAGCAT  241

seq1  CAACTCTAACCACCAGACAAATAATGGCCTAAGTACACCTTTAGAAAATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTAACCACCAGACAAATAATGGCCTAAGTACACCTTTAGAAAATA  291

seq1  AATAACATAGATTTTGAAAGGATGCCCTTTGTTTTTGTTTTAGTTCCTTT  345
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATAACATAGA-TTTGAAAGGATGCCCTTTGTTTTTGTTTTAGTTCCTTT  340

seq1  TACCTCCCTTAGAGACACACACCGTGACCAAGTTGACTTATAAAAGAAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCTTAGAGACACACACCGTGACCAAGTTGACTTATAAAAGAAAG  390

seq1  CATTTAATTAGGAGCTTGCTTAAAGTTTTAGATAGGGATCCCATGATCAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTAGGAGCTTGCTTAAAGTTTTAGATAGGGATCCCATGATCAT  440

seq1  CATAGTAGGAAGCCTGATATCAGAGAAGTAGTCACGAGAGTAGAACAATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAGGAAGCCTGATATCAGAGAAGTAGTCACGAGAGTAGAACAATG  490

seq1  GTTGGCAATCCACATCTGATCCACAAGGAAAGGGCAGAGAGAACGATGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAATCCACATCTGATCCACAAGGAAAGGGCAGAGAGAACGATGGT  540

seq1  GGGTTTGGCATGGGCTTTTAAGGCCTCAAAGTCTATCTCCAGTGACACAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGCATGGGCTTTTAAGGCCTCAAAGTCTATCTCCAGTGACACAT  590

seq1  CTCCTCCTACAAGGCCACACACCTTCATCCCTCCTGTTCCATTAATTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTACAAGGCCACACACCTTCATCCCTCCTGTTCCATTAATTTCA  640

seq1  AATATTTTTGACAACTGACGGGATGGCTAAGTGGAGAGAGCATGGGTTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTGACAACTGACGGGATGGCTAAGTGGAGAGAGCATGGGTTCA  690

seq1  GCAATCATGAGAGCCTGGGGTTAGGGTGCATAAACCCACAAAAAAAAATC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCATGAGAGCCTGGGGTTAGGGTGCATAAACCCACAAAAAAAAATC  740

seq1  ACTTTGCACATGGAGTTCTAGCTATAATCTCAGAGATCATGAGGTAAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCACATGGAGTTCTAGCTATAATCTCAGAGATCATGAGGTAAAGA  790

seq1  CAAACTCTGGCCTTCACACAAAGGCCTCACTGTGTAAGTATACCCCTACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTGGCCTTCACACAAAGGCCTCACTGTGTAAGTATACCCCTACA  840

seq1  CATGTAACCCCACAAATGCCAATGTCTATCATATGCAAGAAGGTAAAAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAACCCCACAAATGCCAATGTCTATCATATGCAAGAAGGTAAAAAA  890

seq1  TTCAATTCCAGAAGATTTATATTCCAATCTTATTGATGATTATCCATTAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCCAGAAGATTTATATTCCAATCTTATTGATGATTATCCATTAT  940

seq1  GTGTAAGATGAGATTTATAAAATACATATAACACAGTGATTAGAATGAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGATGAGATTTATAAAATACATATAACACAGTGATTAGAATGAGA  990

seq1  GAATTTCATCTGCCCCTATCTGTACCAAAATATATACCAGCTTTATATTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATCTGCCCCTATCTGTACCAAAATATATACCAGCTTTATATTT  1040

seq1  GAAATAGATCATCTGGGCTAGCAAAATGGCTAAACAGGTAAAATGGGATA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGATCATCTGGGCTAGCAAAATGGCTAAACAGGTAAAATGGGATA  1090

seq1  AAAGCACTTCTCTAAGAGCCTACAGTTCTAAGATCCATCCTTTTATCTTA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTCTCTAAGAGCCTACAGTTCTAAGATCCATCCTTTTATCTTA  1140

seq1  CATGTCTGAAAGAGAAAACTGAATTC  1171
      ||||||||||||||||||||||||||
seq2  CATGTCTGAAAGAGAAAACTGAATTC  1166