MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-196E21
Chromosome	1 (Build37)
Map Location	7,816,708 - 7,817,852
singlet/doublet	singlet
Overlap gene	none
Upstream gene	St18, LOC665015, LOC665027, LOC100039347, LOC435608, Pcmtd1, LOC545302, LOC665063, LOC665069, LOC100039408
Downstream gene	Sntg1, LOC100039474
Link	Open Mouse BAC browser

Click to get alignment info.

name	St18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240690 MGI:2446700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665015 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665015
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC665027 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 136 ESTs, 4 Proteins pseudo : _no_value

name	LOC100039347 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039347
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC435608 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Pcmtd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319263 MGI:2441773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545302
definition	note : adenosylhomocysteinase pseudogene pseudo : _no_value

name	LOC665063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC665069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Sntg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins

name	St18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:35215306 GeneID:240690 MGI:2446700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppression of tumorigenicity 18 transcript_id : NM_173868.1

name	Pcmtd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111186469 GeneID:319263 MGI:2441773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 transcript_id : NM_183028.2

name	Sntg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140971304 GeneID:71096 MGI:1918346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntrophin, gamma 1 transcript_id : NM_027671.4

name	LOC100039474 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233594 GeneID:100039474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 117 ESTs, 4 Proteins product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) transcript_id : XM_001472887.1

name	St18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35215307 CCDS:CCDS14810.1 GeneID:240690 MGI:2446700
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : breast carcinoma product : suppression of tumorigenicity 18 protein_id : NP_776293.1

name	Pcmtd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33942104 GeneID:319263 MGI:2441773
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 protein_id : NP_898849.1

name	Sntg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560093 GeneID:71096 MGI:1918346
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : syntrophin, gamma 1 protein_id : NP_081947.2

name	LOC100039474 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233595 GeneID:100039474
definition	codon_start : 1 product : similar to Cyclin-dependent kinases regulatory subunit 2 (CKS-2) protein_id : XP_001472937.1

name	LOC665015 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665015
definition	number : 1 pseudo : _no_value

name	LOC100039347 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039347
definition	number : 1 pseudo : _no_value

name	LOC100039347 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039347
definition	number : 2 pseudo : _no_value

name	LOC100039347 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039347
definition	number : 3 pseudo : _no_value

name	LOC435608 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435608
definition	number : 1 pseudo : _no_value

name	LOC435608 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435608
definition	number : 2 pseudo : _no_value

name	LOC435608 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435608
definition	number : 3 pseudo : _no_value

name	LOC435608 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435608
definition	number : 4 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 1 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 2 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 3 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 4 pseudo : _no_value

name	LOC665063 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665063
definition	number : 5 pseudo : _no_value

name	LOC665069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665069
definition	number : 1 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 5 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 4 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 3 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 2 pseudo : _no_value

name	LOC100039408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039408
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:471774
definition	standard_name : ST18_2399

name	(CDS detail)
type	STS
link
xref	UniSTS:185429
definition	standard_name : AV348974

name	(CDS detail)
type	STS
link
xref	UniSTS:128795
definition	standard_name : D1Mit428

name	(CDS detail)
type	STS
link
xref	UniSTS:128796
definition	standard_name : D1Mit428.2

name	(CDS detail)
type	STS
link
xref	UniSTS:122890
definition	standard_name : 07.MMHAP53FLC1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:186238
definition	standard_name : M-11219

name	(CDS detail)
type	STS
link
xref	UniSTS:128924
definition	standard_name : D1Mit65

name	(CDS detail)
type	STS
link
xref	UniSTS:207122
definition	standard_name : BB175276

name	(CDS detail)
type	STS
link
xref	UniSTS:123774
definition	standard_name : 27.MMHAP17FA6.seq

name	LOC665027 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233589 GeneID:665027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 136 ESTs, 4 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_030835.1

clone name	MSMg01-348C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484E06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-169P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-271O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146D06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-196E21.b	B6Ng01-196E21.g
ACC	GA018481	GA018482
length	1,234	1,142
definition	B6Ng01-196E21.b	B6Ng01-196E21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgcttcttagttacacaaccactgttggatatgggttccatccc tgagagtgagtaaaattagatattggttaattaatcctacaaaattttgt aatcattgccccagaatattttttcaggaaggttggaaaatcagagattt tgtgcctggattagtatttatgtttatcttttggtaaattgcagagtata ttcccctaccaaagacactagaacctatgggtgaaatttccctgaacgta ccagatctctggctcgatgttcaatgagttatgtgggtgttgtctttagc aatagtgcctttctggcagtttgcaaagataaatttattatcttggaaaa tgccagggtcttttgggaatttccataagagccccttggccaacagctca attggatgtaacctaggcccagtattagaagctttgtttagtgagaagag atgcccagttggtactctgtctccctcatcatttggaaacttcataggat tgccatgaaatattttaggaagtttccacaacaatatggttctatccaca cctgtaatgtctgtcaattttaaatttttcttcccacatttcctccttca aacctatttccctgtatgtgatactgctatttacattttctctgcccctt aattacccataaaatatttactattacactcttctagggagatgtgtata tcccaccttacctcctttatacctaaagattggtccacagatcgtagctt ggttatcatttatttaaggactaatatttacacacagtgaatgaaaacag tatttatttttctgtgtctgggttacttttactcaagttgtttttctcta acttcgtgcatttgtctacaaatttcatgaattcgttgctttcaaaagct gagtaaattgagataatggcgacacacaccttttaatcgcagaacttgag aggcactcattctataaatggaccgcatttgctttaattcattttttgga agaacatcaagcttattttccaattcctagctatatgaataaatcaccca atgaaaatgataagaaaatgccaatgcataggataaaggcatccttgaat atatgcccaagaagggtataagctgaatccatgagttagatagattttca tctggtctgaggacattacacctgctctctcataagggaactgtcataaa ttgcactccagccgcaatatgaactgtcaatgag	gaattcaccattaataaatgaatcaaaatctgttaattagccaaaattac taaaattcactaacataatctatatttaattatctagacattggagactt aaggcatttaggttttcttttcctttttattaagaacatcttttttgtta gctactgtaaacaatagaactagactacctctttctctttattacaagta agttggtgtgagagttcatgcctttattctgaatatttgagaatttgagg gaggagaattgccatgacatgtggaaagcctgacagtctactgagtgcta tataaggctgtttcagaactaatgtgattttaaaaaataaagatagcatc tttaagagaatcaatttgggactatttctttagtttctttactatggcta aggataggttgaagatgttagtgcagtttggatggaatactgtttctttg taactgccatgagcatgagtcttttgatcaataatctcctgtcctcacag ttcacttatatttaactgctttctgtattctgcaagtgcaacatttatga aatctttagaatttctctcttactgctttgtctctaaagcagtttataat tgtataaattggtgaaatcacttgtaataaataggtagtagatacagcag gctatagaatagcactaattattttctgttaaaataaattttatagtatc agtaagttatctgaaatcatgagaagaaattattagcaagcatgtattca ctgacttataaccatttctatctctgaaggacaagggccagaatatagta ctttagttttttaagattttcttggagtacatgcatgttacactttatta ataaaacacaaaatatttttcttgtgctttagaataaatgcatatttttc ttatctacagaaaaaggattctttgctctagttgttactggggagtcctg agtacacagagagaagatgggttgaaacctgtgtgaatggcttcttttgt cacaacaggaagtgattttcttttttccccacatggtgtaactcacacat gagatatatatcttttgttgtgcctaaaagagacatgtgtgcactgtgga ttagggaaggtacagacttttgagaggagcgcgattttctga
quality values	Open. Hide. 58 33 35 35 58 62 47 38 62 62 62 62 62 47 54 62 62 54 51 56 33 54 51 62 62 47 47 62 62 54 62 46 33 56 25 28 50 46 59 62 62 49 43 62 59 39 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 59 62 62 62 62 62 62 62 62 62 62 49 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 59 62 62 62 62 62 59 62 54 42 56 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 38 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 54 43 43 54 59 59 62 59 59 59 62 59 59 59 56 59 59 59 59 62 56 56 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 56 62 62 62 59 62 62 62 62 62 62 62 59 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 56 62 56 49 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 46 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 56 62 56 56 49 62 62 62 62 62 56 56 62 56 56 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 51 56 56 62 56 62 62 62 56 62 62 62 62 54 62 56 56 51 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 47 54 62 62 62 62 56 56 62 62 62 62 47 56 47 56 62 62 62 62 56 53 56 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 52 62 62 52 62 62 62 62 62 62 47 46 54 62 43 43 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 43 48 48 50 54 52 54 52 48 52 58 58 58 58 58 54 58 58 54 54 54 51 45 47 52 52 45 43 58 58 54 58 52 58 58 58 54 58 58 58 58 54 58 58 58 58 52 58 58 58 58 58 58 58 58 54 49 54 52 47 41 34 54 52 54 54 45 40 52 52 52 52 52 48 54 50 42 54 39 41 52 52 58 52 54 52 41 41 49 54 54 50 50 58 51 58 58 46 51 58 58 58 58 46 51 49 58 58 50 58 46 58 58 58 49 49 49 58 54 58 51 47 41 54 51 47 45 29 30 58 51 45 43 58 41 51 58 58 58 54 51 51 54 48 39 40 44 41 50 47 51 48 41 33 44 51 53 41 49 46 50 45 37 58 58 51 41 41 32 58 52 58 53 52 52 42 53 50 44 42 42 31 41 44 47 50 34 31 41 50 50 50 50 37 52 50 40 42 50 50 51 58 50 52 41 23 49 58 28 33 43 37 21 40 35 34 39 39 32 50 32 50 19 40 54 38 50 14 28 42 52 53 42 32 39 54 42 53 39 54 45 27 15 12 34 39 32 29 30 52 35 45 45 39 35 24 39 30 47 32 42 34 40 53 52 54 18 22 37 29 45 40 31 44 26 39 32 37 43 54 42 37 46 54 54 54 54 31 39 38 25 47 31 37 40 41 54 40 33 30 28 20 6 49 46 31 26 30 52 35 41 31 31 52 32 37 21 51 49 49 46 40 32 34 32 20 28 32 52 31 31 31 29 52 31 31 33 46 37 51 30 32 31 31 32 18 51 38 20 37 33 31 35 28 31 25 28 18 30 31 22 29 21 25 29 34 45 44 31 30 51 51 34 28 31 31 28 46 11 33 26 46 8 37 22 31 31 19 31 19 19 29 32 30 22 23 16 27 16 16 31 21 31 23 30 31 23 48 46 15 29 6 11 32 28 33 36 25 36 39 24 21 24 25 27 11 18 7 34 9 11 26 27 26 20 30 30 32 11 11 30 27 46 12 20 31 35 26 15 21 31 16 18 26 33 18 15 13 16 48 27 12 27 35 32 27 18 32 44 44 44 36 28 18 27 16 25 18 31 22 29 20 31 18 21 10 33 29 30 33 7 5 39 37 32 15 19 16 17 24 9 18 22 21 32 24 18 21 23 21 4 15 10 22 6 20 20 39 25 10 14 13 7 37 5 8 29 18 22 25 43 39 26 19 13 16 6 17 17 8 27 47 38 28 16 15 9 11 4 5 21 20 3 9 28 19 13 10 19 8 14 30 14 6 10 28 27 28 27 28 27 20 8 7 7 22 6 13 7 6 9 13 11 15 6 20 7 4 9 21 34 27 6 9 7 6 8 22 17 6 6 8 16 6 7 17 10 10 7 22 3 4 3 3 4 7 5 7 4 2 5 14 25 9 16 10 12 4 10 5 11 14 5 14 16 21 8 6 3 3 1 5 7 12 6 5 5 7 4 11 6 4 5 13 6 9 4 6 8 7 5 4 25 12 6 8 12 3 5 4 3 9 5 15 15 3 3 8 4 2 4 13 3 8 14 8 3 2 3 3 6 5 5 7 4 8 8 11 1 1 2 15 3 4 2 1 1 4 4 3	Open. Hide. 62 47 56 39 62 47 33 54 47 47 62 32 24 24 22 22 25 22 21 38 38 34 24 29 31 28 34 33 59 62 62 62 62 59 62 62 62 62 59 62 62 59 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 59 43 33 34 33 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 59 62 62 62 62 54 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 62 62 62 54 54 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 45 47 39 62 62 62 62 62 62 62 62 62 48 62 62 58 58 58 58 58 58 54 54 41 58 58 58 54 58 58 54 52 58 58 58 54 58 58 58 54 52 58 42 58 58 58 54 52 54 58 58 54 58 58 54 58 49 58 58 58 58 58 58 58 58 58 52 58 58 53 53 58 54 58 58 58 54 54 54 58 52 58 54 54 58 54 54 58 58 40 50 58 58 58 58 50 58 58 58 58 41 47 46 58 51 54 58 51 58 58 51 51 51 58 47 37 42 49 58 58 58 58 50 58 58 58 58 53 50 50 58 49 58 53 58 51 54 58 53 53 53 53 48 43 58 58 50 52 52 50 49 41 39 46 58 41 50 58 51 58 58 50 58 50 58 58 51 58 39 52 58 42 41 58 58 50 53 58 58 40 58 50 50 54 52 58 37 50 51 42 49 52 53 53 58 50 51 58 51 49 39 54 50 52 53 37 50 50 33 38 47 54 52 42 53 39 54 54 34 53 45 46 29 47 25 54 54 50 41 32 54 31 49 51 49 35 42 42 52 45 39 53 37 45 39 49 40 50 49 40 39 52 39 39 52 51 41 52 54 40 42 45 31 41 52 51 21 54 33 37 53 54 30 28 40 37 34 35 53 38 34 37 39 53 45 31 33 53 28 31 34 48 30 27 47 38 47 35 33 37 39 43 40 35 31 31 40 23 47 49 32 32 35 40 32 52 34 45 32 32 45 34 24 52 33 21 27 22 36 52 34 14 38 30 35 42 21 32 37 37 36 31 33 31 31 31 51 31 31 31 42 51 51 51 51 24 18 40 12 31 17 51 51 21 27 32 18 46 12 40 24 34 32 30 21 31 31 26 25 30 45 30 25 28 31 21 35 42 47 28 37 31 31 33 31 20 24 46 46 25 22 19 31 19 46 36 46 21 31 31 46 46 46 31 31 30 26 42 30 38 32 42 47 26 44 18 27 32 29 31 31 22 31 38 21 27 31 15 13 46 46 46 23 30 11 33 25 30 34 35 23 30 15 26 38 38 31 39 36 30 38 28 19 29 24 31 47 27 32 32 30 21 15 14 25 33 25 31 21 27 31 31 23 34 44 43 21 21 11 17 18 27 19 25 32 12 22 27 38 24 31 19 27 31 18 29 31 25 30 15 31 18 31 38 25 15 13 21 18 43 15 11 20 21 22 14 31 34 21 21 20 19 12 19 12 29 25 25 25 39 43 17 12 8 15 10 9 16 21 4 6 15 12 13 15 5 10 20 32 30 30 43 15 18 9 43 43 48 48 28 22 7 5 5 6 5 20 6 18 8 8 14 15 10 8 11 15 20 11 14 5 3 4 4 7 12 5 5 8 24 12 5 4 3 5 9 18 47 47 21 18 9 7 3 3 6 6 5 27 7 21 32 15 7 9 5 7 7 9 24 9 5 3 3 3 5 4 4 7 12 4 6 8 2 2 13 11 2 20 17 6 4 1 3 5 16 21 10 6 11 3 9 12 12 6 4 4 4 10 5 5 20 11 5 7 5 5 10 4 9 26 12 19 6 5 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_7816708_7817852
seq2: B6Ng01-196E21.g_63_1204

seq1  GAATTCACCATTAATAAATGAATCAAAATCTGTTAATTAGCCAAAATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTAATAAATGAATCAAAATCTGTTAATTAGCCAAAATTAC  50

seq1  TAAAATTCACTAACATAATCTATATTTAATTATCTAGACATTGGAGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCACTAACATAATCTATATTTAATTATCTAGACATTGGAGACTT  100

seq1  AAGGCATTTAGGTTTTCTTTTCCTTTTTATTAAGAACATCTTTTTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTTAGGTTTTCTTTTCCTTTTTATTAAGAACATCTTTTTTGTTA  150

seq1  GCTACTGTAAACAATAGAACTAGACTACCTCTTTCTCTTTATTACAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTAAACAATAGAACTAGACTACCTCTTTCTCTTTATTACAAGTA  200

seq1  AGTTGGTGTGAGAGTTCATGCCTTTATTCTGAATATTTGAGAATTTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTGTGAGAGTTCATGCCTTTATTCTGAATATTTGAGAATTTGAGG  250

seq1  GAGGAGAATTGCCATGACATGTGGAAAGCCTGACAGTCTACTGAGTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAATTGCCATGACATGTGGAAAGCCTGACAGTCTACTGAGTGCTA  300

seq1  TATAAGGCTGTTTCAGAACTAATGTGATTTTAAAAAATAAAGATAGCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGCTGTTTCAGAACTAATGTGATTTTAAAAAATAAAGATAGCATC  350

seq1  TTTAAGAGAATCAATTTGGGACTATTTCTTTAGTTTCTTTACTATGGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGAATCAATTTGGGACTATTTCTTTAGTTTCTTTACTATGGCTA  400

seq1  AGGATAGGTTGAAGATGTTAGTGCAGTTTGGATGGAATACTGTTTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGGTTGAAGATGTTAGTGCAGTTTGGATGGAATACTGTTTCTTTG  450

seq1  TAACTGCCATGAGCATGAGTCTTTTGATCAATAATCTCCTGTCCTCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCCATGAGCATGAGTCTTTTGATCAATAATCTCCTGTCCTCACAG  500

seq1  TTCACTTATATTTAACTGCTTTCTGTATTCTGCAAGTGCAACATTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTATATTTAACTGCTTTCTGTATTCTGCAAGTGCAACATTTATGA  550

seq1  AATCTTTAGAATTTCTCTCTTACTGCTTTGTCTCTAAAGCAGTTTATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAGAATTTCTCTCTTACTGCTTTGTCTCTAAAGCAGTTTATAAT  600

seq1  TGTATAAATTGGTGAAATCACTTGTAATAAATAGGTAGTAGATACAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATTGGTGAAATCACTTGTAATAAATAGGTAGTAGATACAGCAG  650

seq1  GCTATAGAATAGCACTAATTATTTTCTGTTAAAATAAATTTTATAGTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGAATAGCACTAATTATTTTCTGTTAAAATAAATTTTATAGTATC  700

seq1  AGTAAGTTATCTGAAATCATGAGAAGAAATTATTAGCAAGCATGTATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTATCTGAAATCATGAGAAGAAATTATTAGCAAGCATGTATTCA  750

seq1  CTGACTTATAACCATTTCTATCTCTGAAGGACAAGGGCCAGAATATAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTATAACCATTTCTATCTCTGAAGGACAAGGGCCAGAATATAGTA  800

seq1  CTTTAGTTTTTTAAGATTTTCTTGGAGTACATGCATGTTACACTTTATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTTTTTAAGATTTTCTTGGAGTACATGCATGTTACACTTTATTA  850

seq1  ATAAAACACAAAAATATTTTTCTTGTGCTTTAAGAATAAATGCATA-TTT  899
      ||||||||| ||||||||||||||||||||| |||||||||||||| |||
seq2  ATAAAACAC-AAAATATTTTTCTTGTGCTTT-AGAATAAATGCATATTTT  898

seq1  TCTTATCTACAGAAAAAGGATTCTTTGCTCTAGTTGTTACTGGGGAGTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTACAGAAAAAGGATTCTTTGCTCTAGTTGTTACTGGGGAGTCC  948

seq1  TGAGTACACAGAGAGAAGATGGGTTGAAACCTGTGTGAATGGCTTCTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACACAGAGAGAAGATGGGTTGAAACCTGTGTGAATGGCTTCTTTT  998

seq1  GTCACAAACAGGAAGTGATTTTCTTTTT--CACACAATGTGTAACTCACA  1047
      ||||| ||||||||||||||||||||||  | ||||  ||||||||||||
seq2  GTCAC-AACAGGAAGTGATTTTCTTTTTTCCCCACATGGTGTAACTCACA  1047

seq1  CAATGAGATATATATCTTTTGTTGTTGCTTAAAAGAGACATGTGTGCACT  1097
      | |||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  C-ATGAGATATATATCTTTTGTTG-TGCCTAAAAGAGACATGTGTGCACT  1095

seq1  GTGGGATTAAGGGATAGTACAGAATTTTGAGAAGAG-GCGATTTCCTGA  1145
      || ||||| |||||  ||||||| |||||||| ||| ||||||| ||||
seq2  GT-GGATT-AGGGAAGGTACAGACTTTTGAGAGGAGCGCGATTTTCTGA  1142

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information