BAC Information

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BAC

Clone NameB6Ng01-197C21
Chromosome1 (Build37)
Map Location 15,823,948 - 15,824,418
singlet/doubletsinglet
Overlap geneTerf1
Upstream geneSmt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2, Ppia-ps1_109.1
Downstream geneGm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197C21.bB6Ng01-197C21.g
ACCGA019113GA019114
length1,202654
definitionB6Ng01-197C21.b B6Ng01-197C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttgaagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggatttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatattctttagttctttcttcagggacttgaagtttttatcatac
acatctttcacttccttcgatagagtcaagccgagatgtttgatattgat
ttgctgctattgagaaggttgttgactcccctaattcatatctcagcccg
cttattcattgcgtcatagcaagcgcagttcacctgattcgagtaatctc
atagacgattctacttccaccggagacctgtttattcaggttaagtggag
tactctgtgtgcgacatttggtaagcaacttcaataccaacaatctcccg
gatagggtgaaatactgacattgcttcttcccattggcatccctagacat
gc
gaattcccatgatacaactcatggatcaaatgaagctcaagagggaggaa
gaccaaaaagtggattttcaaccctatttataaggaggaacaaaataatc
aagggaagtagagggaggagggacttgaaaggaagagaagatggggaggg
ggataagagggaaagaatcaggaatgggagaagatattggcctctgatct
ccacaggtacacatgcatatgcccacacataaataaatgaatataatttt
taaaatttgaataaagaatatgaagtgctttgaaaattggctatacttgt
gtctgcaaatatacatttaaactttagagatgacttaggcaaaaaaatct
gtcctcaaaagccagtcttctgtttctcctagttacctgttaatggctta
ccaacataaattagaataattttgttcagtttgaaatctagcagtgtagt
ctagtcttttatcattattattatttatttttgtttttttgagacagggt
ttctttctctgtgtagccctggctgtcctggaactcactcagtaggccag
actggtcttgaactcagaaatccactgcctctgcctctgagttgctggga
ttaagggcgtgcgtgtgccccccactgcctggctggagtctagtcttgtc
tcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15823948_15824418
seq2: B6Ng01-197C21.g_246_716

seq1  ATATTGCCCTCTGATCTCCACAGGTACACATGCATATGCCCACACATAAA  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGCCTCTGATCTCCACAGGTACACATGCATATGCCCACACATAAA  50

seq1  TAAATGAATATAATTTTTAAAATTTGAATAAAGAATATGAAGTGCTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATATAATTTTTAAAATTTGAATAAAGAATATGAAGTGCTTTGA  100

seq1  AAATTGGCTATACTTGTGTCTGCAAATATACATTTAAACTTTAGAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCTATACTTGTGTCTGCAAATATACATTTAAACTTTAGAGATGA  150

seq1  CTTAGGCAAAAAAATCTGTCCTCAAAAGCCAGTCTTCTGTTTCTCCTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCAAAAAAATCTGTCCTCAAAAGCCAGTCTTCTGTTTCTCCTAGT  200

seq1  TACCTGTTAATGGCTTACCAACATAAATTAGAATAATTTTGTTCAGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTTAATGGCTTACCAACATAAATTAGAATAATTTTGTTCAGTTTG  250

seq1  AAATCTAGCAGTGTAGTCTAGTCTTTTATCATTATTATTATTTATTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGCAGTGTAGTCTAGTCTTTTATCATTATTATTATTTATTTTTG  300

seq1  TTTTTTTGAGACAGGGTTTCTTTCTCTGTGTAGCCCTGGCTGTCCTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGACAGGGTTTCTTTCTCTGTGTAGCCCTGGCTGTCCTGGAA  350

seq1  CTCACTCAGTAGGCCAGACTGGTCTTGAACTCAGAAATCCACCTGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCACTCAGTAGGCCAGACTGGTCTTGAACTCAGAAATCCA-CTGCCTCT  399

seq1  GCCTCACGAG-TGCTGGGATTAAGGGCGTGCGTGTG-CCACCACTGCCTG  448
      |||||  ||| ||||||||||||||||||||||||| || ||||||||||
seq2  GCCTC-TGAGTTGCTGGGATTAAGGGCGTGCGTGTGCCCCCCACTGCCTG  448

seq1  GCTGGAGTCTAGTCTTGTCTCAG  471
      |||||||||||||||||||||||
seq2  GCTGGAGTCTAGTCTTGTCTCAG  471