This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
B6Ng01-198E11
Chromosome
1 (Build37)
Map Location
25,798,692 - 25,799,837
singlet/doublet
singlet
Overlap gene
Bai3
Upstream gene
Lmbrd1
,
4930472D16Rik
,
LOC669171
,
LOC665595
Downstream gene
4931408C20Rik
Link
Open Mouse BAC browser
Click to get alignment info.
name
Lmbrd1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:68421
MGI:1915671
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
4930472D16Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:74946
MGI:1922196
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA
name
LOC669171
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:669171
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein
pseudo
: _no_value
name
Bai3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:210933
MGI:2441837
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC665595
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665595
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
4931408C20Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:210940
MGI:3588222
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Lmbrd1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:123701961
GeneID:68421
MGI:1915671
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: LMBR1 domain containing 1
transcript_id
: NM_026719.2
name
Bai3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:71896636
GeneID:210933
MGI:2441837
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: brain-specific angiogenesis inhibitor 3
transcript_id
: NM_175642.3
name
4931408C20Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142354801
GeneID:210940
MGI:3588222
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA 4931408C20 gene
transcript_id
: NM_001033764.2
name
Lmbrd1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:123701962
GeneID:68421
MGI:1915671
definition
codon_start
: 1
product
: liver regeneration p-53 related protein
protein_id
: NP_080995.2
name
Bai3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:71896637
CCDS:CCDS14855.1
GeneID:210933
MGI:2441837
definition
GO_component
: GO:0009986 - cell surface [Evidence IEA]
GO_function
: GO:0016527 - brain-specific angiogenesis inhibitor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]
GO_process
: GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: G protein-coupled receptor BAI3
product
: brain-specific angiogenesis inhibitor 3
protein_id
: NP_783573.3
name
4931408C20Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:85702059
CCDS:CCDS14856.1
GeneID:210940
MGI:3588222
definition
codon_start
: 1
exception
: mismatches in translation
product
: hypothetical protein LOC210940
protein_id
: NP_001028936.1
name
LOC665595
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665595
definition
number
: 1
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:234096
definition
name
(CDS detail)
type
STS
link
xref
UniSTS:178364
definition
standard_name
: AV347960
name
(CDS detail)
type
STS
link
xref
UniSTS:141509
definition
standard_name
: D10Mit273
name
(CDS detail)
type
STS
link
xref
UniSTS:462052
definition
standard_name
: BAI3_3939
name
(CDS detail)
type
STS
link
xref
UniSTS:128722
definition
standard_name
: D1Mit363
name
(CDS detail)
type
STS
link
xref
UniSTS:128553
definition
standard_name
: D1Mit211
name
(CDS detail)
type
STS
link
xref
UniSTS:125341
definition
standard_name
: MHAa7c1.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:128733
definition
standard_name
: D1Mit373
name
(CDS detail)
type
STS
link
xref
UniSTS:124232
definition
standard_name
: 37.MMHAP38FLE4.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:123886
definition
standard_name
: 30.MHAa89g6.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:142265
definition
standard_name
: D1Nds4
name
(CDS detail)
type
STS
link
xref
UniSTS:123785
definition
standard_name
: 27.MMHAP53FLA6.seq
name
4930472D16Rik
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149233784
GeneID:74946
MGI:1922196
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA 4930472D16 gene
transcript_id
: XR_035268.1
name
LOC669171
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149233772
GeneID:669171
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein
product
: similar to LNR42
pseudo
: _no_value
transcript_id
: XR_031920.1
clone name
MSMg01-384K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-389C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-214N13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-115G05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106P09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-092L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-478F04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418M08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538A06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-305B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-374G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385O02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-420I22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-479O24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123E20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-171G24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173E07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-434L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-294O20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-291K10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-384A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-296O14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123E12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-468L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-473B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-134N21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-484K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-161O11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-170E01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151K05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-302M20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-428K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-469E07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-374H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415F22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-059D11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-331G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-394J22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-493M24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-327I17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-177N04
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-472D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-421L03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-111H20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-402H10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-086D05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-311M23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-389N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-338D08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-410E04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158I21
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-319L12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-153N22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-370M05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-455M24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-065G10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-234J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299I23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065C16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-462H16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-363G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-507I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488K24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-125A04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-172A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-464L22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418A15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448D07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-319P19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105N20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-049B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496J21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482P19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-294P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105K09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-512C23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-050E21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-332M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-307D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108D18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052J10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130F21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-291A02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-173P21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437D09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144M17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173I01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186P18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040P09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263H06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-192M20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-168A05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-305J22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-271K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185N14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-234G14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-130A22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-066H13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128B04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-284J20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-319M16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054C13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-069J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-146H11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-067A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-040G12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-248B24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-178A15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-058N20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-168N07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-146O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-308H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-321J02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206M15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-064D19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-133P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163N20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-006G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-125J22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094H17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-270J04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-063E07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075L10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-140I10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-176O09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198E11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268D08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-157E12
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doublet
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