MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-198L07
Chromosome	1 (Build37)
Map Location	19,981,858 - 20,190,827
singlet/doublet	doublet
Overlap gene	Pkhd1
Upstream gene	EG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Downstream gene	Il17a, Il17f, Mcm3, Paqr8, Efhc1, Tram2, LOC100040291
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG435611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100040189 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040189
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tcfap2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226896 MGI:2153466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040413 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins pseudo : _no_value

name	Tcfap2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC226901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:226901
definition	note : isoleucine-tRNA synthetase pseudogene pseudo : _no_value

name	Pkhd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241035 MGI:2155808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16171 MGI:107364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257630 MGI:2676631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mcm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17215 MGI:101845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paqr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74229 MGI:1921479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Efhc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71877 MGI:1919127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 5 Proteins

name	Tram2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170829 MGI:1924817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040291 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	EG435611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233623 GeneID:435611 MGI:3649018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG435611 transcript_id : XM_487581.5

name	Tcfap2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346596 GeneID:226896 MGI:2153466
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2, delta transcript_id : NM_153154.1

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609880 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_009334.2

name	Tcfap2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70609884 GeneID:21419 MGI:104672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor AP-2 beta transcript_id : NM_001025305.1

name	LOC100040198 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233625 GeneID:100040198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ac2-210 transcript_id : XM_001474254.1

name	Pkhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157465 GeneID:241035 MGI:2155808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycystic kidney and hepatic disease 1 transcript_id : NM_153179.3

name	Il17a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367609 GeneID:16171 MGI:107364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17A transcript_id : NM_010552.3

name	Il17f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119360345 GeneID:257630 MGI:2676631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17F transcript_id : NM_145856.2

name	Mcm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130774 GeneID:17215 MGI:101845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 3 (S. cerevisiae) transcript_id : NM_008563.2

name	Paqr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254345 GeneID:74229 MGI:1921479
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progestin and adipoQ receptor family member VIII transcript_id : NM_028829.3

name	Efhc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233628 GeneID:71877 MGI:1919127
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 5 Proteins product : EF-hand domain (C-terminal) containing 1, transcript variant 1 transcript_id : XM_129694.8

name	Tram2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131006 GeneID:170829 MGI:1924817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocating chain-associating membrane protein 2 transcript_id : NM_133252.2

name	Tram2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802928 GeneID:170829 MGI:1924817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocating chain-associating membrane protein 2 transcript_id : NM_177409.3

name	EG435611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233624 GeneID:435611 MGI:3649018
definition	codon_start : 1 product : similar to thioredoxin-like 4A protein_id : XP_487581.5

name	Tcfap2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346597 CCDS:CCDS14838.1 GeneID:226896 MGI:2153466
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 product : transcription factor AP-2, delta protein_id : NP_694794.1

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609881 CCDS:CCDS14839.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : transcription factor AP-2 beta isoform 1 protein_id : NP_033360.2

name	Tcfap2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70609885 CCDS:CCDS14840.1 GeneID:21419 MGI:104672
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : transcription factor AP-2 beta isoform 2 protein_id : NP_001020476.1

name	LOC100040198 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233626 GeneID:100040198
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_001474304.1

name	Pkhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157466 CCDS:CCDS14841.1 GeneID:241035 MGI:2155808
definition	GO_component : GO:0031362 - anchored to external side of plasma membrane [Evidence ISS]; GO:0016324 - apical plasma membrane [Evidence ISS]; GO:0005932 - basal body [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS] GO_process : GO:0016337 - cell-cell adhesion [Evidence IMP]; GO:0042592 - homeostasis [Evidence ISS]; GO:0001822 - kidney development [Evidence IDA]; GO:0051271 - negative regulation of cell motility [Evidence IMP] codon_start : 1 note : TIG multiple domains 1; tigmin product : polyductin protein_id : NP_694819.2

name	Il17a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754324 CCDS:CCDS14842.1 GeneID:16171 MGI:107364
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 product : interleukin 17 protein_id : NP_034682.1

name	Il17f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119360346 GeneID:257630 MGI:2676631
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 product : interleukin 17F protein_id : NP_665855.2

name	Mcm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859484 CCDS:CCDS14843.1 GeneID:17215 MGI:101845
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : mini chromosome maintenance deficient product : minichromosome maintenance deficient 3 protein_id : NP_032589.1

name	Paqr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254346 CCDS:CCDS14844.1 GeneID:74229 MGI:1921479
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : progestin and adipoQ receptor family member VIII protein_id : NP_083105.3

name	Efhc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233629 GeneID:71877 MGI:1919127
definition	codon_start : 1 product : EF-hand domain (C-terminal) containing 1 isoform 1 protein_id : XP_129694.7

name	Tram2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875432 CCDS:CCDS14846.1 GeneID:170829 MGI:1924817
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocating chain-associating membrane protein 2 protein_id : NP_573515.1

name	Tram2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916683 CCDS:CCDS14846.1 GeneID:170829 MGI:1924817
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocating chain-associating membrane protein 2 protein_id : NP_803128.1

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 1 pseudo : _no_value

name	LOC100040189 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040189
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128651
definition	standard_name : D1Mit298

name	(CDS detail)
type	STS
link
xref	UniSTS:164108
definition	standard_name : AI606113

name	(CDS detail)
type	STS
link
xref	UniSTS:234076
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128653
definition	standard_name : D1Mit3

name	(CDS detail)
type	STS
link
xref	UniSTS:158777
definition	standard_name : AI182499

name	(CDS detail)
type	STS
link
xref	UniSTS:178361
definition	standard_name : AI118496

name	(CDS detail)
type	STS
link
xref	UniSTS:123282
definition	standard_name : 15.MMHAP97FRE9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128887
definition	standard_name : D1Mit52

name	(CDS detail)
type	STS
link
xref	UniSTS:128888
definition	standard_name : D1Mit52.2

name	(CDS detail)
type	STS
link
xref	UniSTS:128626
definition	standard_name : D1Mit276

name	(CDS detail)
type	STS
link
xref	UniSTS:125623
definition	standard_name : Results_ER_9_6_95_92.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124008
definition	standard_name : 32.MMHAP90FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:224808
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207135
definition	standard_name : C87042

name	(CDS detail)
type	STS
link
xref	UniSTS:207136
definition	standard_name : RH126856

name	(CDS detail)
type	STS
link
xref	UniSTS:163244
definition	standard_name : X62154

name	(CDS detail)
type	STS
link
xref	UniSTS:128576
definition	standard_name : D1Mit231

name	(CDS detail)
type	STS
link
xref	UniSTS:123112
definition	standard_name : 12.MMHAP31FLD3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128761
definition	standard_name : D1Mit4

name	LOC100040413 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233631 GeneID:100040413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 633 ESTs, 12 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031764.1

name	LOC100040291 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233630 GeneID:100040291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to glutathione S-transferase Yc subunit pseudo : _no_value transcript_id : XR_031749.1

clone name	MSMg01-205L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-446F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-280F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-535L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-198L07.b	B6Ng01-198L07.g
ACC	GA020234	GA020235
length	732	1,018
definition	B6Ng01-198L07.b	B6Ng01-198L07.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(19,981,858 - 19,982,589)	(20,189,836 - 20,190,827)
sequence	gaattcttctaggtggcagagaaaagaaagtgtgattcgaaggttacaga gtgtgggtttgtatgatattatgtagccacttgtttacaattatgttaca gaagctgcatgaggaatctgggccaaaatataaaaaatattaactaaaga tgtaaatataatgctttgaaacagaaaaaaattaattctttcactcatct aaattctcatttctaataaacttaatagcaaggttattttattttattat tagatattttctttatttacatttcaaatgctatcacgaaagttccctat accctcccccaccctgctcccctacccacccacttcagcttcttgaccct agcattcccctgtactggtgcatataaagtttgcatgaccaaggggcctt tcttcccagtaatggccgactaggccatcttctgctacatatgcaactag agacaccagctctgggggttcttgttatttcaaattttgttccaccttta gggttgcagacccatttaactccttgggtacattctctagcttctccatt gggagccctgtgttccatcttatagatgactgtgagcatccacttctgta tttgccacgcactggcataacctcatactagacagctatatcagggtccc ttaagcaaaatcttggtggcatatgcaatagtgtctgggtttggtggatg attatgggatggctccccaggtggggtagtct	gaattcagtcattgtggccactagctcctcttttgactgcatccacgaca gaaaggctcctcagtcagccaactggacatcaacagatagagcaccttcc aatcccagaggaggccgaatcggtattctgtggcctgtttctgcctcaga accaaatgcatggccccaggagccatggcacaaagtaaggagccgtcatt cagtcccaggaattatgaagcttcaaggtaggattcttgactttgcccta aatatatggatccatccacccaaacacacaatgttcagtagtattctgaa accatacagctagaaggtcctgtctggtctactgcttgcttgtctagctg ggatcctactattcatgaattacaattgtgtattaaagacagtgagtgat ttcttacagaagttactgtttctacttgctggactgtcttcattataact atttaactctataattactccttaatagcaattgcttttcctgctatcca atacagtaactgagatgcagaaattgtatcagagctgcaagtggctttat agttggtgctataaagattggtaggtttaaagtcagcatttgaccataag gggaattttatcttctatcagatagttttggcaattttgtacttattcca ttcatatttagtctatctcacagttggtttgagtgttacatatggacaga tttttcatcaaaattttaattattttttctaaagactatagtgtattttg tagtatatatttatgggtttttaaaaattatttttacatgtgtgagtgtt tgtcagtattatatgtctgtgaaccatattacatgaagcacccacagagg cttacaatagggaattagatccccagatacttgtgtgtttattagagggt tggtatatagctttccatttagcttgctaggaaccttgagtacctaagtt tccccaagaattaacaggtcagtgtttctaaaatacttaaaccaagctag ctttccagctggaattgc
quality values	Open. Hide. 58 26 52 35 58 58 58 58 58 62 49 54 62 62 62 49 56 62 62 54 47 47 62 62 49 62 62 62 62 62 47 54 26 27 20 19 34 27 22 31 45 34 37 32 32 46 59 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 51 59 59 51 54 54 62 59 62 54 33 62 62 62 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 54 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 59 56 54 56 62 62 62 62 59 62 56 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 49 49 43 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 54 62 62 62 62 56 54 47 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 47 56 56 56 56 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 47 37 62 62 62 62 62 40 62 56 62 54 62 62 62 62 62 62 62 62 56 62 47 54 50 52 31 62 62 62 52 62 62 52 62 62 62 62 62 62 62 54 62 48 52 52 47 41 47 47 52 42 62 62 52 62 62 58 54 39 41 51 54 54 54 46 54 52 54 58 54 39 42 54 52 54 54 54 17 49 58 41 42 52 52 52 52 54 54 35 45 34 52 52 58 52 58 47 54 58 41 42 54 44 47 50 52 52 42 54 42 27 58 54 58 35 42 54 50 54 54 58 58 39 54 54 46 54 54 52 58 51 41 35 51 58 24 50 51 50 50 47 35 32 41 58 37 26 42 40 50 37 42 33 34 42 38 45 40 42 47 27 42 32 8 21 28	Open. Hide. 62 35 56 47 62 41 41 62 62 47 31 42 31 36 21 27 21 21 22 38 28 22 36 39 59 62 62 62 62 62 62 62 62 49 62 59 46 62 62 62 62 62 62 59 62 62 59 59 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 35 54 62 59 56 62 59 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 59 54 54 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 43 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 51 62 62 62 62 62 62 54 47 62 62 62 62 62 56 54 51 62 62 62 56 62 46 62 47 62 62 62 62 62 54 47 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 47 62 62 47 39 62 62 38 38 62 62 62 62 62 62 56 56 56 47 56 56 62 62 62 56 56 40 28 20 52 47 53 49 62 52 62 62 48 27 62 62 62 62 62 62 62 62 62 62 50 62 46 62 47 62 52 62 54 62 62 62 54 58 54 37 45 58 39 58 58 58 54 37 58 52 52 58 52 54 52 58 42 30 58 58 54 52 54 52 52 58 42 54 52 46 58 50 54 54 58 58 43 50 42 47 29 37 52 58 54 46 58 54 52 58 32 37 52 52 50 46 52 34 48 38 51 49 46 51 48 50 41 32 18 58 58 58 12 22 50 51 50 40 51 54 37 38 58 51 41 47 34 40 40 41 34 58 58 58 58 53 46 41 36 44 42 31 41 24 50 53 53 52 49 26 54 40 29 25 58 50 41 51 39 51 50 33 58 52 47 33 49 50 54 58 42 41 58 58 28 15 58 58 58 41 58 54 58 51 16 39 24 45 32 53 53 54 31 41 40 26 45 37 33 33 26 34 51 16 14 32 33 51 33 41 31 38 18 19 16 40 23 8 20 41 27 29 33 40 28 25 38 12 24 33 28 38 7 17 37 20 13 16 12 44 27 35 22 12 14 21 29 25 32 34 33 25 42 27 10 24 20 22 29 32 18 22 10 13 33 18 15 11 46 32 34 25 27 30 26 9 23 28 19 40 32 32 22 16 34 6 12 10 18 8 27 7 10 32 36 11 51 8 26 15 12 8 9 29 21 26 18 14 7 6 32 38 11 15 13 9 32 11 26 11 32 20 31 18 9 41 22 6 11 21 14 20 11 27 21 14 9 6 33 18 24 9 26 6 9 9 31 9 11 34 9 7 13 16 31 24 25 43 22 16 27 24 37 11 9 11 25 38 9 12 16 25 12 6 7 6 17 28 27 11 6 11 22 32 9 6 8 11 30 25 13 11 19 22 10 9 11 38 29 13 25 9 21 31 33 11 11 8 8 27 33 17 6 11 29 9 9 29 8 5 5 13 22 17 13 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_19981858_19982589
seq2: B6Ng01-198L07.b_44_775

seq1  GAATTCTTCTAGGTGGCAGAGAAAAGAAAGTGTGATTCGAAGGTTACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAGGTGGCAGAGAAAAGAAAGTGTGATTCGAAGGTTACAGA  50

seq1  GTGTGGGTTTGTATGATATTATGTAGCCACTTGTTTACAATTATGTTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTTTGTATGATATTATGTAGCCACTTGTTTACAATTATGTTACA  100

seq1  GAAGCTGCATGAGGAATCTGGGCCAAAATATAAAAAATATTAACTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCATGAGGAATCTGGGCCAAAATATAAAAAATATTAACTAAAGA  150

seq1  TGTAAATATAATGCTTTGAAACAGAAAAAAATTAATTCTTTCACTCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATAATGCTTTGAAACAGAAAAAAATTAATTCTTTCACTCATCT  200

seq1  AAATTCTCATTTCTAATAAACTTAATAGCAAGGTTATTTTATTTTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCATTTCTAATAAACTTAATAGCAAGGTTATTTTATTTTATTAT  250

seq1  TAGATATTTTCTTTATTTACATTTCAAATGCTATCACGAAAGTTCCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTTCTTTATTTACATTTCAAATGCTATCACGAAAGTTCCCTAT  300

seq1  ACCCTCCCCCACCCTGCTCCCCTACCCACCCACTTCAGCTTCTTGACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCCCACCCTGCTCCCCTACCCACCCACTTCAGCTTCTTGACCCT  350

seq1  AGCATTCCCCTGTACTGGTGCATATAAAGTTTGCATGACCAAGGGGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCCCTGTACTGGTGCATATAAAGTTTGCATGACCAAGGGGCCTT  400

seq1  TCTTCCCAGTAATGGCCGACTAGGCCATCTTCTGCTACATATGCAACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCAGTAATGGCCGACTAGGCCATCTTCTGCTACATATGCAACTAG  450

seq1  AGACACCAGCTCTGGGGGTTCTTGTTATTTCAAATTTTGTTCCACCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCAGCTCTGGGGGTTCTTGTTATTTCAAATTTTGTTCCACCTTTA  500

seq1  GGGTTGCAGACCCATTTAACTCCTTGGGTACATTCTCTAGCTTCTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAGACCCATTTAACTCCTTGGGTACATTCTCTAGCTTCTCCATT  550

seq1  GGGAGCCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTA  600

seq1  TTTGCCACGCACTGGCATAACCTCATACTAGACAGCTATATCAGGGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACGCACTGGCATAACCTCATACTAGACAGCTATATCAGGGTCCC  650

seq1  TTAAGCAAAATCTTGGTGGCATATGCAATAGTGTCTGGGTTTGGTGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAAAATCTTGGTGGCATATGCAATAGTGTCTGGGTTTGGTGGATG  700

seq1  ATTATGGGATGGCTCCCCAGGTGGGGTAGTCT  732
      ||||||||||||||||||||||||||||||||
seq2  ATTATGGGATGGCTCCCCAGGTGGGGTAGTCT  732

seq1: chr1_20189836_20190827
seq2: B6Ng01-198L07.g_65_1082 (reverse)

seq1  GCAATTCCAAGCTGGAAAGCTAGC-TGGTTT-AGTA-TTTAG-AACACTG  46
      |||||||| ||||||||||||||| |||||| |||| ||||| |||||||
seq2  GCAATTCC-AGCTGGAAAGCTAGCTTGGTTTAAGTATTTTAGAAACACTG  49

seq1  A-CTGTT-ATTCT--GGGGAACTTAG--TCTCA--GGTCCTAGC-AGCTA  87
      | ||||| |||||  ||| |||||||   ||||  | ||||||| |||||
seq2  ACCTGTTAATTCTTGGGGAAACTTAGGTACTCAAGGTTCCTAGCAAGCTA  99

seq1  AATGGAAGCTTATA-ACAAACCCTCT-ATA---ACACCAGT-TCTGGGGA  131
      |||||||   |||| || |||||||| |||   |||| ||| ||||||||
seq2  AATGGAAAGCTATATACCAACCCTCTAATAAACACACAAGTATCTGGGGA  149

seq1  TCTAATTCCCTATTGT-AGCCTCTGTGGGTGCTTCATGT-ATATGGTTCA  179
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  TCTAATTCCCTATTGTAAGCCTCTGTGGGTGCTTCATGTAATATGGTTCA  199

seq1  CAGACATAT-ATACTGACAAACACTCACACATGT-AAAATAATTTTT-AA  226
      ||||||||| |||||||||||||||||||||||| |||||||||||| ||
seq2  CAGACATATAATACTGACAAACACTCACACATGTAAAAATAATTTTTAAA  249

seq1  AACCCATAAATATATACTAC-AAATACACTATAGTCTTTAG-AAAAATAA  274
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  AACCCATAAATATATACTACAAAATACACTATAGTCTTTAGAAAAAATAA  299

seq1  TTAAAATTTTGATG-AAAATCTGTCCATATGTAACACTCAAACCAACTGT  323
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTTGATGAAAAATCTGTCCATATGTAACACTCAAACCAACTGT  349

seq1  GAGATAGACTAAATATGAATGGAATAAGTACAAAATTGCCAAAACTATCT  373
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGACTAAATATGAATGGAATAAGTACAAAATTGCCAAAACTATCT  399

seq1  GATAGAAGATAAAATTCCCCTTATGGTCAAATGCTGACTTTAAACCTACC  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAGATAAAATTCCCCTTATGGTCAAATGCTGACTTTAAACCTACC  449

seq1  AATCTTTATAGCACCAACTATAAAGCCACTTGCAGCTCTGATACAATTTC  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATAGCACCAACTATAAAGCCACTTGCAGCTCTGATACAATTTC  499

seq1  TGCATCTCAGTTACTGTATTGGATAGCAGGAAAAGCAATTGCTATTAAGG  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCAGTTACTGTATTGGATAGCAGGAAAAGCAATTGCTATTAAGG  549

seq1  AGTAATTATAGAGTTAAATAGTTATAATGAAGACAGTCCAGCAAGTAGAA  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTATAGAGTTAAATAGTTATAATGAAGACAGTCCAGCAAGTAGAA  599

seq1  ACAGTAACTTCTGTAAGAAATCACTCACTGTCTTTAATACACAATTGTAA  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACTTCTGTAAGAAATCACTCACTGTCTTTAATACACAATTGTAA  649

seq1  TTCATGAATAGTAGGATCCCAGCTAGACAAGCAAGCAGTAGACCAGACAG  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAATAGTAGGATCCCAGCTAGACAAGCAAGCAGTAGACCAGACAG  699

seq1  GACCTTCTAGCTGTATGGTTTCAGAATACTACTGAACATTGTGTGTTTGG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCTAGCTGTATGGTTTCAGAATACTACTGAACATTGTGTGTTTGG  749

seq1  GTGGATGGATCCATATATTTAGGGCAAAGTCAAGAATCCTACCTTGAAGC  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGATCCATATATTTAGGGCAAAGTCAAGAATCCTACCTTGAAGC  799

seq1  TTCATAATTCCTGGGACTGAATGACGGCTCCTTACTTTGTGCCATGGCTC  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATTCCTGGGACTGAATGACGGCTCCTTACTTTGTGCCATGGCTC  849

seq1  CTGGGGCCATGCATTTGGTTCTGAGGCAGAAACAGGCCACAGAATACCGA  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCCATGCATTTGGTTCTGAGGCAGAAACAGGCCACAGAATACCGA  899

seq1  TTCGGCCTCCTCTGGGATTGGAAGGTGCTCTATCTGTTGATGTCCAGTTG  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCCTCCTCTGGGATTGGAAGGTGCTCTATCTGTTGATGTCCAGTTG  949

seq1  GCTGACTGAGGAGCCTTTCTGTCGTGGATGCAGTCAAAAGAGGAGCTAGT  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTGAGGAGCCTTTCTGTCGTGGATGCAGTCAAAAGAGGAGCTAGT  999

seq1  GGCCACAATGACTGAATTC  992
      |||||||||||||||||||
seq2  GGCCACAATGACTGAATTC  1018

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BAC

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Alignment Information