BAC Information

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BAC

Clone NameB6Ng01-199F22
Chromosome1 (Build37)
Map Location 7,106,128 - 7,107,208
singlet/doubletsinglet
Overlap genePcmtd1
Upstream gene4732440D04Rik, Rb1cc1, EG620393, LOC100039302, LOC664946, St18, LOC665015, LOC665027, LOC100039347, LOC435608
Downstream geneLOC545302, LOC665063, LOC665069, LOC100039408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199F22.bB6Ng01-199F22.g
ACCGA020720GA020721
length1,0791,193
definitionB6Ng01-199F22.b B6Ng01-199F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcacttaatattttagaccatcattgatgttaggtaacaacaa
atcatgggaaaagaagtacccacaacagataaaggaagatgtgcatttcc
caggtttcatggagccttttggttcaggtctgatcatctgcctcttacta
gaacatggagaaaggatcttctgcatgtctagttgccctttcatccacca
ccttttgttttcctaatgcattttccatctcctgaagtgctggggtccag
gccagttactgtagagctgtatgcagatggatctatcctgcgaacatttt
gcacatggaattatcttttccttgttaaaaatctcctgattagctcattg
ttgcctttagttttgttgttgttgttgttgttgttgtttattagatgtga
atatcctgggttttgaggtagtttgagaactcatgtcatatgtaaaaatt
ctgatttgtttggtttttcagtagaatgtccataaatttggggggaccat
tgaaaagagtctgtgcccaaaaagtgaggaaattgctggtctacagtgaa
aaattgttaaggtgccagaaagtgccagctgtagataatttctgaaaagt
cttattcttgtgattgagcacttcagccagcaatcccttcaccaagtatg
cctttaaagaagctgccttcagtttcactttttccaggacccattttgtg
tacagcactctatcctttaatgtgtgctttctctcttaaaggtgaacata
ctgatggccttccttcttcattggcttattgtaatgtttagtaataaaac
actgtgaaaggtaaatagtggtagctgtttatttattgttcctcgcctca
actctttctaaccaagaatgaactgtggggctgaagatgttcagcatact
acagatgacagcactggcttctccgagatttttggattccatagaggcta
actgccatctgtaactccaggtccacgccctgcatacacagacagactca
gacacacctaatacacatacaaataaaaaataaaatttttgtgttgttgt
gcttgaaaaaatgtataagtttgtagtaa

gaattctctactccatgtttactgcattgcatccactgtctgtccttccc
aagagactgaatctgtgcttgcctgaaggctgtcttatgaatctatccct
gtgtctgtgtttgcccccgtgcatgactgttgggtgtctatgtgtgtttg
tgtagcaaaggtctttcactctgtatttactgaacaacacagaaagcatc
aatgggtgtatgaaagacagttttaaaaaaccctttaacagaatttcaca
gggaattaagtcacttattccaacttatccaaacagacccagataacaaa
cagaattagaaaagtcattgtttatcagtcaataccaaaactttgtgtgt
aattaattatgtataggaattatcttcaacatgtgtggtggttattcact
tcataagatttcagccccaatttttgctgtttccagaaaataatttatag
gtataactttgggtaaggataaggaaaagtacatattttaagattatact
tatgtattatcttagattacaaaagttaatttcatgggaaatctaaggca
agtaagtttgattgattaatgagaatgtagttctcttaatggtaggttaa
acaaacaggttgggtgtacaataggatagcaatgttaaatcataagtgac
ataaaggtatactagtaactggctataagatccagtaaaagttccattat
ctttggttgtaagagatagtttcataatattgcatcaacatagtaatctt
tatcattgttacaagtgggcaatttttttcttaatgactctcccactgtt
tgcttaagaatatcccatgtgttaagggtttgctcctcacccaatgggaa
gttgttagacattttaccaagtggaacctaatgagaatttcctagttcat
ttgtgtgattatgacttttggggatcagtgagaagcattccttcttctcc
atctctatttttgcttccccaacctcccatgcagttacagcatttgttgt
gcacacatagtcatggccatggcatgcctacaatgccacagattcagagc
atgatttctcatcgggtagcttaaaatacctctgcttttaatgctgatga
tctcaagcatctgcatataggtaaccgtagaactatttggaactccttct
tttcttgacttgagacttgtaaatattgcgttggtgtataact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_7106128_7107208
seq2: B6Ng01-199F22.b_44_1122

seq1  GAATTCTTCACTTAATATTTTAGACCATCATTGATGTTAGGTAACAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTTAATATTTTAGACCATCATTGATGTTAGGTAACAACAA  50

seq1  ATCATGGGAAAAGAAGTACCCACAACAGATAAAGGAAGATGTGCATTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGAAAAGAAGTACCCACAACAGATAAAGGAAGATGTGCATTTCC  100

seq1  CAGGTTTCATGGAGCCTTTTGGTTCAGGTCTGATCATCTGCCTCTTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCATGGAGCCTTTTGGTTCAGGTCTGATCATCTGCCTCTTACTA  150

seq1  GAACATGGAGAAAGGATCTTCTGCATGTCTAGTTGCCCTTTCATCCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGAGAAAGGATCTTCTGCATGTCTAGTTGCCCTTTCATCCACCA  200

seq1  CCTTTTGTTTTCCTAATGCATTTTCCATCTCCTGAAGTGCTGGGGTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTTTTCCTAATGCATTTTCCATCTCCTGAAGTGCTGGGGTCCAG  250

seq1  GCCAGTTACTGTAGAGCTGTATGCAGATGGATCTATCCTGCGAACATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTACTGTAGAGCTGTATGCAGATGGATCTATCCTGCGAACATTTT  300

seq1  GCACATGGAATTATCTTTTCCTTGTTAAAAATCTCCTGATTAGCTCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGAATTATCTTTTCCTTGTTAAAAATCTCCTGATTAGCTCATTG  350

seq1  TTGCCTTTAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTTATTAGATGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTTATTAGATGTGA  400

seq1  ATATCCTGGGTTTTGAGGTAGTTTGAGAACTCATGTCATATGTAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGGGTTTTGAGGTAGTTTGAGAACTCATGTCATATGTAAAAATT  450

seq1  CTGATTTGTTTGGTTTTTCAGTAGAATGTCCATAAATTTGGGGGGACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGTTTGGTTTTTCAGTAGAATGTCCATAAATTTGGGGGGACCAT  500

seq1  TGAAAAGAGTCTGTGCCCAAAAAGTGAGGAAATTGCTGGTCTACAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAGTCTGTGCCCAAAAAGTGAGGAAATTGCTGGTCTACAGTGAA  550

seq1  AAATTGTTAAGGTGCCAGAAAGTGCCAGCTGTAGATAATTTCTGAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTTAAGGTGCCAGAAAGTGCCAGCTGTAGATAATTTCTGAAAAGT  600

seq1  CTTATTCTTGTGATTGAGCACTTCAGCCAGCAATCCCTTCACCAAGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTTGTGATTGAGCACTTCAGCCAGCAATCCCTTCACCAAGTATG  650

seq1  CCTTTAAAGAAGCTGCCTTCAGTTTCACTTTTTCCAGGACCCATTTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAGAAGCTGCCTTCAGTTTCACTTTTTCCAGGACCCATTTTGTG  700

seq1  TACAGCACTCTATCCTTTAATGTGTGCTTTCTCTCTTAAAGGTGAACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACTCTATCCTTTAATGTGTGCTTTCTCTCTTAAAGGTGAACATA  750

seq1  CTGATGGCCTTCCTTCTTCATTGGCTTATTGTAATGTTTAGTAATAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGCCTTCCTTCTTCATTGGCTTATTGTAATGTTTAGTAATAAAAC  800

seq1  ACTGTGAAAGGTAAATAGTGGTAGCTGTTTATTTATTGTTCCTCGCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAAGGTAAATAGTGGTAGCTGTTTATTTATTGTTCCTCGCCTCA  850

seq1  ACTCTTTCTAACCAAGAATGAACTGTGGGGCTGAAGATGTTCAGCATACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCTAACCAAGAATGAACTGTGGGGCTGAAGATGTTCAGCATACT  900

seq1  ACAGATGACAGCACTGGCTTCTCCGAGGATTTTGGATTCCATAGAGGCTA  950
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  ACAGATGACAGCACTGGCTTCTCCGAGATTTTTGGATTCCATAGAGGCTA  950

seq1  ACTGCCATCTGTAACTCCAGGTCCACGCCCTGCATACACAGACAGACTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATCTGTAACTCCAGGTCCACGCCCTGCATACACAGACAGACTCA  1000

seq1  GACACACCT-ATACACATACAAATAAAAAATAAAATTTTTGTTGTTGTTG  1049
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  GACACACCTAATACACATACAAATAAAAAATAAAATTTTTG-TGTTGTTG  1049

seq1  TTGTTGAAAAAATGTTATAAGGTTTGTAGTAA  1081
      |  ||||||||||| ||||| |||||||||||
seq2  TGCTTGAAAAAATG-TATAA-GTTTGTAGTAA  1079


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