BAC Information

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BAC

Clone NameB6Ng01-202D18
Chromosome1 (Build37)
Map Location 148,860,487 - 148,861,637
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202D18.bB6Ng01-202D18.g
ACCGA022787GA022788
length3161,144
definitionB6Ng01-202D18.b B6Ng01-202D18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgtctcggaaaaaaaagaaaaagaaagaaaaaaaagaatcaccagatag
tactggttttgaaggtgtgatggggtcatagagaacagctaagttttggt
aaagtgagaggtcagggaaggccattaatgaaggtgcagcctcagttgga
gtagggccaggattgaaggattcatgcaaagaagttaaggtttgagacca
ttaagagaacctataagaggctattggtgaaggctaattgcagccgaaga
cttcagggcattcgagatgccagtaccataatatgttcaccaagaatagc
agctgcaatagagtat

gagaagtttgtctattgtatttttcttttggattattcttttaggatgca
ttatatgttaaagtctgtagagttcacatattgttttgtaaatgttaaag
cacatcattttattttaattaattccttggtttatctaaactttctgtct
tcaaactcatgctgaactaaaaaggatattcatcacttttaggaaagaat
atggaactgaatactttaaaatttaatctttgaaatgcaaagcagaaatg
tgaatgaataattcaagtacttaccaaaggctttgaagacattctcttgt
ttacatttacatggctctacttcacttacacatcaacaactttaagaaaa
agtgtaagcaaaaacaaataaaatgctaatatttttctttagctgcctgt
ttctttgcatccatctttcttcattatctttcttcccttgatgtgttttc
ttctccctccagaagtaatccagcagggcatttttcttaacttaggggaa
tagctagaaaactcctgcttcattttcaacttttcatttttactttcaat
atcatattcctcatattattatagtcccatatctaacaacaagtaaaata
acccaaaggtgaaggaaacttgaacattatttcctaaatgattttagtca
cttctaccatcattggtgcttgactattgtgtaggactatcagacacatt
tgattcatgatcatgagaaaggttttgaaattaaatttgcagaaattaga
tggaaaaatttaatttgttacatagaggttcaagtaatatgtggtgaagt
attaaatcaactacacctagacacatctcagctcaccagtgtttctttca
cttaaacatgtgtataatttgtctgtatgaaattttctagttagttctcc
tgagatatgagtaaacactatcccttgatgagtgacttctttcctctcca
catatgtaccctatacccctcaagaataattagatttatcttcacttttg
catttcatacatgaatcctatttataattctctactagcttaagctagtg
aattttcacaggcaataatacttcttttgaggctaaaagaaatattaggt
agtatttgtaggaacccgacctaaaactctagccgaatatcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148860487_148861637
seq2: B6Ng01-202D18.g_70_1213 (reverse)

seq1  CATGATATTTGGGTTAGGGGTTTTTTTAGTCGTGTTCCTACAAATACTAC  50
      ||||||| || || ||| |   ||||  |||| |||||||||||||||||
seq2  CATGATA-TTCGGCTAGAG---TTTTAGGTCGGGTTCCTACAAATACTAC  46

seq1  --TATATTTCTTTTAGCCTC-AAAGAAGTATATTTTGCCTGGTGAAAATT  97
         ||||||||||||||||| |||||||||| | |||||| |||||||||
seq2  CTAATATTTCTTTTAGCCTCAAAAGAAGTAT-TATTGCCT-GTGAAAATT  94

seq1  CACTAGCTTAAGCTAAGTAGAAGAAATTATAAATAGGATTCATGTATGAA  147
      |||||||||||||| ||||||   ||||||||||||||||||||||||||
seq2  CACTAGCTTAAGCT-AGTAGA--GAATTATAAATAGGATTCATGTATGAA  141

seq1  ATGCAAAAGTGAAGATAAATCTAATTATTCTTGAGGGGTATAGGGTACAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAAGTGAAGATAAATCTAATTATTCTTGAGGGGTATAGGGTACAT  191

seq1  ATGTGGAGAGGAAAAGAAGTCACTCATCAAGGGATAGTGTTTACTCATAT  247
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGAGG-AAAGAAGTCACTCATCAAGGGATAGTGTTTACTCATAT  240

seq1  CTCAGGAGAACTAACTAGAAAATTTCATACAGACAAATTATACACATGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGAACTAACTAGAAAATTTCATACAGACAAATTATACACATGTT  290

seq1  TAAGTGAAAGAAACACTGGTGAGCTGAGATGTGTCTAGGTGTAGTTGATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAAAGAAACACTGGTGAGCTGAGATGTGTCTAGGTGTAGTTGATT  340

seq1  TAATACTTCACCACATATTACTTGAACCTCTATGTAACAAATTAAATTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTCACCACATATTACTTGAACCTCTATGTAACAAATTAAATTTT  390

seq1  TCCATCTAATTTCTGCAAATTTAATTTCAAAACCTTTCTCATGATCATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTAATTTCTGCAAATTTAATTTCAAAACCTTTCTCATGATCATGA  440

seq1  ATCAAATGTGTCTGATAGTCCTACACAATAGTCAAGCACCAATGATGGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGTGTCTGATAGTCCTACACAATAGTCAAGCACCAATGATGGTA  490

seq1  GAAGTGACTAAAATCATTTAGGAAATAATGTTCAAGTTTCCTTCACCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGACTAAAATCATTTAGGAAATAATGTTCAAGTTTCCTTCACCTTT  540

seq1  GGGTTATTTTACTTGTTGTTAGATATGGGACTATAATAATATGAGGAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATTTTACTTGTTGTTAGATATGGGACTATAATAATATGAGGAATA  590

seq1  TGATATTGAAAGTAAAAATGAAAAGTTGAAAATGAAGCAGGAGTTTTCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGAAAGTAAAAATGAAAAGTTGAAAATGAAGCAGGAGTTTTCTA  640

seq1  GCTATTCCCCTAAGTTAAGAAAAATGCCCTGCTGGATTACTTCTGGAGGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCCCCTAAGTTAAGAAAAATGCCCTGCTGGATTACTTCTGGAGGG  690

seq1  AGAAGAAAACACATCAAGGGAAGAAAGATAATGAAGAAAGATGGATGCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAACACATCAAGGGAAGAAAGATAATGAAGAAAGATGGATGCAA  740

seq1  AGAAACAGGCAGCTAAAGAAAAATATTAGCATTTTATTTGTTTTTGCTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGGCAGCTAAAGAAAAATATTAGCATTTTATTTGTTTTTGCTTA  790

seq1  CACTTTTTCTTAAAGTTGTTGATGTGTAAGTGAAGTAGAGCCATGTAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTCTTAAAGTTGTTGATGTGTAAGTGAAGTAGAGCCATGTAAAT  840

seq1  GTAAACAAGAGAATGTCTTCAAAGCCTTTGGTAAGTACTTGAATTATTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAGAGAATGTCTTCAAAGCCTTTGGTAAGTACTTGAATTATTCA  890

seq1  TTCACATTTCTGCTTTGCATTTCAAAGATTAAATTTTAAAGTATTCAGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTCTGCTTTGCATTTCAAAGATTAAATTTTAAAGTATTCAGTT  940

seq1  CCATATTCTTTCCTAAAAGTGATGAATATCCTTTTTAGTTCAGCATGAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCTTTCCTAAAAGTGATGAATATCCTTTTTAGTTCAGCATGAGT  990

seq1  TTGAAGACAGAAAGTTTAGATAAACCAAGGAATTAATTAAAATAAAATGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACAGAAAGTTTAGATAAACCAAGGAATTAATTAAAATAAAATGA  1040

seq1  TGTGCTTTAACATTTACAAAACAATATGTGAACTCTACAGACTTTAACAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTAACATTTACAAAACAATATGTGAACTCTACAGACTTTAACAT  1090

seq1  ATAATGCATCCTAAAAGAATAATCCAAAAGAAAAATACAATAGACAAACT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCATCCTAAAAGAATAATCCAAAAGAAAAATACAATAGACAAACT  1140

seq1  TCTC  1151
      ||||
seq2  TCTC  1144


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