BAC Information

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BAC

Clone NameB6Ng01-203M01
Chromosome1 (Build37)
Map Location 46,937,232 - 46,938,429
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855, Slc39a10
Downstream geneEG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203M01.bB6Ng01-203M01.g
ACCGA023880GA023881
length1,2051,191
definitionB6Ng01-203M01.b B6Ng01-203M01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgtactctttagttacatagcgaatttaaggccagccttgaa
tacttaaaactgtatttcaataaaaacttgaagtctttcaagcaatggct
cagtttaagagctcatgaacaatcatgagtaccggcgttcaaatcctagc
acacatgtaacaagctggccacccccacacacacaatctcctgtaactct
accacaaggaggcaagcggcagagggattgttaggacttacacctgtctt
actcaggtttacaatgattctctaggaagaatgtcccacatccactcatt
gtggaagctgcctggcactggaaacctagccaactacccaaggctagtga
agtcatggaccttggaggagaacctaccaccactttactaaatcagcatg
atctctaactgcactctcaatatctgtccatatgcccacagataagtgta
gttctcatccttcatcaaggaaacttgttgatgcaaatgacggagaccac
taccgaaaagtatagcaaatcaaaatgtaggattgcagagcccagttcca
actggtacatctttaccataactcctgcacctaaggctcaggtatcatta
cagaagagggagtggaaagagtatttgagagaaacagggagtttgctatg
aggttgtaccactgagaaatgccagaagccacacccataactaccaacta
tgacctctacaaagacatcactgatagatgtgctactgtggatgggggag
gggagcccaggaagcctcaaccctacccaaagaactacaggctacgaagg
aatgcggagaacaggagaaagagtctttccagggaaaaactcaacaattg
gttattcaataccaaatggtcagatctgaaaataaacatacaagtaacat
tatatagactgagccagacacacacacacacacacacacacacacacaca
ctgtatttaggattatttcacagttgaagaaaacttcatgaatttgaaag
agaccagaatgatacatgggaaggtctgagaaaataaaagagagagaaat
agtgtagtattgtttatatcacaaaaaaatagagttaaaggacaacttaa
agaatattgaaaaaaaatgtcactaaatacagccgcaggggagccagcaa
tcattgttacgtactgtaactacctagccagcaaagtttcctgcaaacaa
tgaga

gaattcagtaccaaggaaactccatcaaatattaccttcaaaaaccaaaa
ccaaaccaaaacaaacaaacaaacaaacaaacaaacatagtacatatgac
aatagtttctattgtgaaatattagcttaaaatatactcttgtgttggtc
tgttttctgagttgtttcatattattaaatacttatgaatatatatggtg
tggttgtattacataaatgaactacttaaatgacacatattctaatattg
tctgtctaagaaaataaaatagatcatggtctaaacaacaaatccctgtt
aaacactctgttgattattatgctgtcttatccatggtaacagggattca
gaagcaaatggtcatctgagtaatttcattttcaatgactttgatacaaa
ttaaagccacaaataatccacatgctgtttttaaaatgtatgaccaagac
tcttggactttctgcttagtttcagagaaaagattctccagtctgataca
ctaatctctgagataccagagctaaagaggaattagaccaggcacccagg
aagtagggagggttgcaagagacaggctttgaataaggtaaatacacata
catatacctaagaggcaacaacatctaatatttactggtaaattcattac
tgtgtaggtcagtggaaaggcccatgcatagcatgagaaaagccctgcat
tcttaatcctcaagaatctttaaacacacacaaacacacacacacacaca
cacacacacacacacacccattactaataaaggactggtccatgaaggga
ccctcaggtgtctatctagaatggatacgttgtattttatggcagatatg
ggcccaagatttgtggtgggaaatttctggaaggatcagaaccccatgtc
cgtaattataaagtactttgctaaccacagggttttctatacagctatcc
atgctttacagattcacagaataaagatttcacaaccctatagacaggaa
gccacaagttcagctccgatatttaagctccacccccaggaagtcttgtc
ccacatctagttacaacctattccttcatctgtggtcctgaactctagag
acataatccaggcatctaccttggtgtgaggagaacagcatttgttcttc
ctcagtcaactcagccatgttccaatatctccacaagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46937232_46938429
seq2: B6Ng01-203M01.g_63_1253

seq1  GAATTCAGTACCAAGGAAACTCCATCAAATATTACCTTCAAAAACCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACCAAGGAAACTCCATCAAATATTACCTTCAAAAACCAAAA  50

seq1  CCAAACCAAAACAAACAAACAAACAAACAAACAAACATAGTACATATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAAACAAACAAACAAACAAACAAACAAACATAGTACATATGAC  100

seq1  AATAGTTTCTATTGTGAAATATTAGCTTAAAATATACTCTTGTGTTGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTCTATTGTGAAATATTAGCTTAAAATATACTCTTGTGTTGGTC  150

seq1  TGTTTTCTGAGTTGTTTCATATTATTAAATACTTATGAATATATATGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGAGTTGTTTCATATTATTAAATACTTATGAATATATATGGTG  200

seq1  TGGTTGTATTACATAAATGAACTACTTAAATGACACATATTCTAATATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTATTACATAAATGAACTACTTAAATGACACATATTCTAATATTG  250

seq1  TCTGTCTAAGAAAATAAAATAGATCATGGTCTAAACAACAAATCCCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTAAGAAAATAAAATAGATCATGGTCTAAACAACAAATCCCTGTT  300

seq1  AAACACTCTGTTGATTATTATGCTGTCTTATCCATGGTAACAGGGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTCTGTTGATTATTATGCTGTCTTATCCATGGTAACAGGGATTCA  350

seq1  GAAGCAAATGGTCATCTGAGTAATTTCATTTTCAATGACTTTGATACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAATGGTCATCTGAGTAATTTCATTTTCAATGACTTTGATACAAA  400

seq1  TTAAAGCCACAAATAATCCACATGCTGTTTTTAAAATGTATGACCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCACAAATAATCCACATGCTGTTTTTAAAATGTATGACCAAGAC  450

seq1  TCTTGGACTTTCTGCTTAGTTTCAGAGAAAAGATTCTCCAGTCTGATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACTTTCTGCTTAGTTTCAGAGAAAAGATTCTCCAGTCTGATACA  500

seq1  CTAATCTCTGAGATACCAGAGCTAAAGAGGAATTAGACCAGGCACCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTCTGAGATACCAGAGCTAAAGAGGAATTAGACCAGGCACCCAGG  550

seq1  AAGTAGGGAGGGTTGCAAGAGACAGGCTTTGAATAAGGTAAATACACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGGAGGGTTGCAAGAGACAGGCTTTGAATAAGGTAAATACACATA  600

seq1  CATATACCTAAGAGGCAACAACATCTAATATTTACTGGTAAATTCATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACCTAAGAGGCAACAACATCTAATATTTACTGGTAAATTCATTAC  650

seq1  TGTGTAGGTCAGTGGAAAGGCCCATGCATAGCATGAGAAAAGCCCTGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGGTCAGTGGAAAGGCCCATGCATAGCATGAGAAAAGCCCTGCAT  700

seq1  TCTTAATCCTCAAGAATCTTTAAACACACACAAACACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCCTCAAGAATCTTTAAACACACACAAACACACACACACACACA  750

seq1  CACACACACACACACACCCATTACTAATAAAGGACTGGTCCATGAAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACCCATTACTAATAAAGGACTGGTCCATGAAGGGA  800

seq1  CCCTCAGGTGTCTATCTAGAATGGATACGTTGTATTTTATGGCAGATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGTGTCTATCTAGAATGGATACGTTGTATTTTATGGCAGATATG  850

seq1  GGCCCAAGATTTGTGGTGGGAAATTTCTGGAAGGATCAGAACCCCATGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGATTTGTGGTGGGAAATTTCTGGAAGGATCAGAACCCCATGTC  900

seq1  CGTAATTATAAAGTAC-TTGCTAACCACAGGGTTTTCTATACAGCTATCC  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CGTAATTATAAAGTACTTTGCTAACCACAGGGTTTTCTATACAGCTATCC  950

seq1  ATGCTTTACAGATTCACAGATAAAAGATTTCACAA-CCTATAGACAAGGA  998
      ||||||||||||||||||||  ||||||||||||| ||||||||||  | 
seq2  ATGCTTTACAGATTCACAGAATAAAGATTTCACAACCCTATAGACA--GG  998

seq1  AAGCCACAAGTTCAGCTCCGATATTTAAGCTCCA-CCCCAGGAAGTCTTG  1047
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGCCACAAGTTCAGCTCCGATATTTAAGCTCCACCCCCAGGAAGTCTTG  1048

seq1  TCCCACATCTTAGTTTACAACTTAATCCCTTCATCTGTGGGTCTGAACTC  1097
      ||||||||| ||| ||||||| | || |||||||||||||  ||||||||
seq2  TCCCACATC-TAG-TTACAACCT-ATTCCTTCATCTGTGGTCCTGAACTC  1095

seq1  TAGAGACATAAATCCAGGGCATCTACC-TGGTGTGAGTGAAGACAGCATT  1146
      ||||||||| |||||| |||||||||| ||||||||| ||  ||||||||
seq2  TAGAGACAT-AATCCA-GGCATCTACCTTGGTGTGAG-GAGAACAGCATT  1142

seq1  TGTTCTTTTCTTCAAGTCAACTCAAGCACATGTTC--ATATCTCCACAAT  1194
      |||||  ||| || ||||||||| ||| |||||||  |||||||||||| 
seq2  TGTTC--TTCCTC-AGTCAACTC-AGC-CATGTTCCAATATCTCCACAAG  1187

seq1  TTTT  1198
      ||||
seq2  TTTT  1191


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