BAC Information

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BAC

Clone NameB6Ng01-204I06
Chromosome1 (Build37)
Map Location 104,236,830 - 104,237,931
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204I06.bB6Ng01-204I06.g
ACCGA024444GA024445
length1,1611,107
definitionB6Ng01-204I06.b B6Ng01-204I06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacacatgaaggctctttataaatattcattttctttgaactg
tggagttttgtatattctgaaagaaacagtgctgagctttgatttagatg
agtgaggttcaatgaggcactcaccctctcctcggctttctggtactaat
caagctacatggaaataaacatttctgtatatttctgtggttggtttaga
gagagtgtttgtctggtattcacacacagccacagccacaagaatcctct
gtcatccttgaacatttgggtatttatttcctttctctctcatcttgcca
tctactaccttccttcattttctgtaaagtacagaggagattctttggca
agaacacttcatccacatcatcttcttaccaaattaaatccacttacaaa
tgctatttgcaatatttcaaagatttttgacattccgattacctattaat
ggtaaaatataagctatggttgaagtggaaattttgggtttctttggaga
ctgaggtgtatcatgtgatgttgttctggaaactgttttatgacaagatg
ttgtgctgaaacaaacacatgagatgaagttttgttgaagcaaacccatt
agaggatgtattaatgagaacagacacatggtgaatttctagaagctgca
tgaaaaagagtatgtgatgttccattggagcagatatttgagaggagaca
tggacacatgatgtttagaaagggttttagtataccacaacagacagtag
acagtgttccagcactggtttgccttcccttctttactgatcattgtttg
tagagagaaatgcaccaaagaactaatgatattccagaggtttcttgcta
cttccacagactctgccaattggcagagcatcacaaattttcttccatat
tcaaaactgtccttgttgatttgtgaatggtgtaaggggaatgggattca
aagcaaccactgcagaattgtgttgaatttaacatgttgattatcctaaa
tggacaaagatctgggaaattgctccaaagaactattttctaaaaccagg
taacattccatcgtttgatctaatgaacccttctctacctcatctggggt
ggtgggctaaagggcaagttggaaacatttaaagtcccttaattactgta
aggtttttgca

gaattctgtaattgactggccagccggctgagtggcctgtgtgagctctt
gtttattgagagaccctgacttaaaaaaaaaaaatgaagaaaacagaaga
aaatatccaggattttattctggcctcttcagtagtcactatgaatacac
acacacacacacacacacacacacacacacacacacacctcaaatataaa
gaaaatagggagaatcagtatggcatccaccatactcaggtacatgggga
tacaaaacacctattagttgctggtagaatttcttaactgataaatgagg
acagctataacattatcactcagaactgtgtgtttaagcttgaaaaagat
atgaagtttggacataacatgagtgtttctcaccctcaacatcattttgc
gtgacgacatttacacaatgttaaccctctgcacagcatactaataaccc
aggtgtatttgaagaatagcagcagagaaaatagttattggtgttggtgg
agcactgttgcaaaccattggaaaaggctgagcaattctcagttctcaag
aacattgttaatcttgattttatgttattttattctgtttaaacattcta
acaactacgatgttgttttacgtaacaaatgaaactcaagatataataag
taataattttccaccatcctccaaattactactttaaaaatagcttgcta
ttgaaatccagtgtcagattgtcataatcactttatgctattctaattga
atagatatctgtagatgctacaaagaaaatatggaaatgatccctattct
agggaggaaggaagtatccacacattggtcttccttcttgattttcgtgt
gttttgcaaattgtattcttgagttttctaagtttctgggcttatatcca
ctttattagtgagtacataacaagttgacttcttttgggattgggttcca
gatacatccattttgccccaaaatttcataaattcatttttttaatagct
gagtagtactcaatggggacctccaaaaaaattgcaagcttcttgtagtg
aaggatacagtccataagacaaaagggcaaaacgaattgggaaagaattt
tttacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104236830_104237931
seq2: B6Ng01-204I06.g_67_1173

seq1  GAATTCTGTAATTGACTGGCCAGCCGGCTGAGTGGCCTGTGTGAGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATTGACTGGCCAGCCGGCTGAGTGGCCTGTGTGAGCTCTT  50

seq1  GTTTATTGAGAGACCCTGACTTAAAAAAAAAAAATGAAGAAAACAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGAGAGACCCTGACTTAAAAAAAAAAAATGAAGAAAACAGAAGA  100

seq1  AAATATCCAGGATTTTATTCTGGCCTCTTCAGTAGTCACTATGAATACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCAGGATTTTATTCTGGCCTCTTCAGTAGTCACTATGAATACAC  150

seq1  ACACACACACACACACACACACACACACACACACACACCTCAAATATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACCTCAAATATAAA  200

seq1  GAAAATAGGGAGAATCAGTATGGCATCCACCATACTCAGGTACATGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGGGAGAATCAGTATGGCATCCACCATACTCAGGTACATGGGGA  250

seq1  TACAAAACACCTATTAGTTGCTGGTAGAATTTCTTAACTGATAAATGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACACCTATTAGTTGCTGGTAGAATTTCTTAACTGATAAATGAGG  300

seq1  ACAGCTATAACATTATCACTCAGAACTGTGTGTTTAAGCTTGAAAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATAACATTATCACTCAGAACTGTGTGTTTAAGCTTGAAAAAGAT  350

seq1  ATGAAGTTTGGACATAACATGAGTGTTTCTCACCCTCAACATCATTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTTGGACATAACATGAGTGTTTCTCACCCTCAACATCATTTTGC  400

seq1  GTGACGACATTTACACAATGTTAACCCTCTGCACAGCATACTAATAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGACATTTACACAATGTTAACCCTCTGCACAGCATACTAATAACCC  450

seq1  AGGTGTATTTGAAGAATAGCAGCAGAGAAAATAGTTATTGGTGTTGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTATTTGAAGAATAGCAGCAGAGAAAATAGTTATTGGTGTTGGTGG  500

seq1  AGCACTGTTGCAAACCATTGGAAAAGGCTGAGCAATTCTCAGTTCTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTTGCAAACCATTGGAAAAGGCTGAGCAATTCTCAGTTCTCAAG  550

seq1  AACATTGTTAATCTTGATTTTATGTTATTTTATTCTGTTTAAACATTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTTAATCTTGATTTTATGTTATTTTATTCTGTTTAAACATTCTA  600

seq1  ACAACTACGATGTTGTTTTACGTAACAAATGAAACTCAAGATATAATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTACGATGTTGTTTTACGTAACAAATGAAACTCAAGATATAATAAG  650

seq1  TAATAATTTTCCACCATCCTCCAAATTACTACTTTAAAAATAGCTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTTCCACCATCCTCCAAATTACTACTTTAAAAATAGCTTGCTA  700

seq1  TTGAAATCCAGTGTCAGATTGTCATAATCACTTTATGCTATTCTAATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCCAGTGTCAGATTGTCATAATCACTTTATGCTATTCTAATTGA  750

seq1  ATAGATATCTGTAGATGCTACAAAGAAAATATGGAAATGATCCCTATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATCTGTAGATGCTACAAAGAAAATATGGAAATGATCCCTATTCT  800

seq1  AGGGAGGAAGGAAGTATCCACACATTGGTCTTCCTTCTTGATTTTCGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAAGGAAGTATCCACACATTGGTCTTCCTTCTTGATTTTCGTGT  850

seq1  GTTTTGCAAATTGTA-TCTTGAGTTTTCTAAGTTTCTGGGCTAATATCCA  899
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  GTTTTGCAAATTGTATTCTTGAGTTTTCTAAGTTTCTGGGCTTATATCCA  900

seq1  C-TTATTAGTGAGTACATAACAAG-TGACTTCTTTTGGGATTGGGTTCCA  947
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTTATTAGTGAGTACATAACAAGTTGACTTCTTTTGGGATTGGGTTCCA  950

seq1  GATACATCCA-TTTGCCCCAAAATTTCATAAATTCA-TTTTTTAATAGCT  995
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  GATACATCCATTTTGCCCCAAAATTTCATAAATTCATTTTTTTAATAGCT  1000

seq1  GAGTAGTACTCAAT-GGGACCTC--ATAAAATTGCAAAGCTTC-TGTAAG  1041
      |||||||||||||| ||||||||  | |||||||| ||||||| ||||  
seq2  GAGTAGTACTCAATGGGGACCTCCAAAAAAATTGC-AAGCTTCTTGTA--  1047

seq1  GTGAAAGATACAGTCAATAAGACAAAAAGGGCAAAAACAGATTGGGAAAG  1091
      ||||| ||||||||| ||||||| |||||||| |||||  ||||||||||
seq2  GTGAAGGATACAGTCCATAAGAC-AAAAGGGC-AAAACGAATTGGGAAAG  1095

seq1  GA-TTTTTACCA  1102
       | |||||||||
seq2  AATTTTTTACCA  1107


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