BAC Information

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BAC

Clone NameB6Ng01-204J10
Chromosome1 (Build37)
Map Location 68,114,957 - 68,215,278
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneCps1, Kif22-ps
Downstream geneLOC667842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204J10.bB6Ng01-204J10.g
ACCGA024490GA024491
length758891
definitionB6Ng01-204J10.b B6Ng01-204J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,114,957 - 68,115,707)(68,214,398 - 68,215,278)
sequence
gaattccttgaattaagcattacaaattaaaatgaacaaaacctaagaat
ttgagaatccttattaagaagacaaagaaccatgccgtaatcttgatatc
atgatggcatttcacgttaagaaataaaactcttcttgaaaatcgattat
tgaaatgaaaagtgatgaatttgtcttttagaacattaaatgtattagtg
atatttggtcagtttttgctatatagagaggggaggtagtgacccctgtc
atggctacagactttcctacctccccaaagattgatattcacaatctatg
aattcattttgttccaaagaggttttgttattgttgttgtcgctgttggt
tttttttttgttgttgttgttttttttgtttttttttctcttctctctgt
agccttgtgtgtcctagaactcactctgtagagcaggacagcctagtatt
cagagatcctccctcctctgtctctctagtgatgggattaaaggtgtgta
ccaccaccatctggcttatgaattagaattttcaacctttaaattatctg
ctcctattggggtataaaattttttcaggtcggatttacaattatgtttt
tttgtttgtttgttttgtttttttttccagcacatagaaaagtaaaccgt
ggtttgggatgtgtggtccctcccactttatcccctctctttctttgttt
cctccctcctatccctctctttctttcttactatcaattttgtttttctt
ttgtttat
gaattccgctgatggtaaatttgaacctttcaagtgcaatgaattcttag
tatcactttccaaataattgtgacgggcttcaccagatgccatcctccag
cagtggtggctatgaactcgtttctttcttcagcactctgaccctacact
gtattgctttctcctgttgtgtactatcagagactaagtgagaaccagga
attgccaaagtcttactgctctagcaactgtagattctatgaagatgtct
tcccttgggtttgaaaggaaagttttgattaaagtatgtcctcatattcc
tccctagtcctgagcttagtgctaacagttcttacaaaggagagttcttt
agggcagtatggctagatctcaggtgtaggattcagccttgggtaaataa
ttagaggtatttttgataggaatagtgaaagatcctaaataaaagtatag
gatcataatttatacctacttcggatgaaaaaggtagatttttaaccctt
gacctatcttccctaggaataatgttctaataatattctttagtttccag
gacagaaaatgttgcataattgatatctagggaattttaaagatgtgtgt
gaaaaaattttataagagacttcgaggtctgtgttgatatgaggaaaaag
gattttttgggataggtacagcaataccatctggtttgtttcagccctca
agaggtttgctagtttctaggcaaacagaggcaatactatgagaacttca
ttaccaacaaacagcaaattataaaataattaaataattaattaaataaa
tatataaattatgccaaattaattaaatgaatatttaaatatttaaacca
accagtgataataatacaataagtttccataatttatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68114957_68115707
seq2: B6Ng01-204J10.b_50_806

seq1  GAATTCCTTGAATTAAGCATTACAAATTAAAATGAACAAAACCTAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAATTAAGCATTACAAATTAAAATGAACAAAACCTAAGAAT  50

seq1  TTGAGAATCCTTATTAAGAAGACAAAGAACCATGCCGTAATCTTGATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATCCTTATTAAGAAGACAAAGAACCATGCCGTAATCTTGATATC  100

seq1  ATGATGGCATTTCACGTTAAGAAATAAAACTCTTCTTGAAAATCGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCATTTCACGTTAAGAAATAAAACTCTTCTTGAAAATCGATTAT  150

seq1  TGAAATGAAAAGTGATGAATTTGTCTTTTAGAACATTAAATGTATTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAAAAGTGATGAATTTGTCTTTTAGAACATTAAATGTATTAGTG  200

seq1  ATATTTGGTCAGTTTTTGCTATATAGAGAGGGGAGGTAGTGACCCCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGTCAGTTTTTGCTATATAGAGAGGGGAGGTAGTGACCCCTGTC  250

seq1  ATGGCTACAGACTTTCCTACCTCCCCAAAGATTGATATTCACAATCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACAGACTTTCCTACCTCCCCAAAGATTGATATTCACAATCTATG  300

seq1  AATTCATTTTGTTCCAAAGAGGTTTTGTTATTGTTGTTGTCGCTGTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTTTGTTCCAAAGAGGTTTTGTTATTGTTGTTGTCGCTGTTGGT  350

seq1  TTTTTTTTTGTTGTTGTTGTTTTTTTTGTTTTTTTTTCTCTTCTCTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGTTGTTGTTGTTTTTTTTGTTTTTTTTTCTCTTCTCTCTGT  400

seq1  AGCCTTGTGTGTCCTAGAACTCACTCTGTAGAGCAGGACAGCCTAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTGTGTCCTAGAACTCACTCTGTAGAGCAGGACAGCCTAGTATT  450

seq1  CAGAGATCCTCCCTCCTCTGTCTCTCTAGTGATGGGATTAAAGGTGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCCTCCCTCCTCTGTCTCTCTAGTGATGGGATTAAAGGTGTGTA  500

seq1  CCACCACCATCTGGCTTATGAATTAGAATTTTCAACCTTTAAATTATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCATCTGGCTTATGAATTAGAATTTTCAACCTTTAAATTATCTG  550

seq1  CTCCTATTGGGGTATAAAATTTTTTCAGGTCGGA-TTACAATTATGTTTT  599
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCTATTGGGGTATAAAATTTTTTCAGGTCGGATTTACAATTATGTTTT  600

seq1  TTTGTTTGTTTG-TTTGTTTTTTTTTCCAGCACAAAGAAAAGTAAACCGT  648
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  TTTGTTTGTTTGTTTTGTTTTTTTTTCCAGCACATAGAAAAGTAAACCGT  650

seq1  GGTTT-GGATGTGTGGTCCCTCCCAC-TTATCCCCTCTC-TTCTTTG-TT  694
      ||||| |||||||||||||||||||| |||||||||||| ||||||| ||
seq2  GGTTTGGGATGTGTGGTCCCTCCCACTTTATCCCCTCTCTTTCTTTGTTT  700

seq1  CCTCCCTCCTATCCCTCTC-TTCTTTCTTACTATTCTAATTTGTTTTTCT  743
      ||||||||||||||||||| ||||||||||||| || | |||||||||||
seq2  CCTCCCTCCTATCCCTCTCTTTCTTTCTTACTA-TCAATTTTGTTTTTCT  749

seq1  TTTGTTTA  751
      ||||||||
seq2  TTTGTTTA  757

seq1: chr1_68214398_68215278
seq2: B6Ng01-204J10.g_70_960 (reverse)

seq1  TTTCAT-AATTAT-GAAACTTATTGTATTA-TATCACTGGTT-GTTTAAA  46
      |||||| |||||| |||||||||||||||| ||||||||||| |||||||
seq2  TTTCATAAATTATGGAAACTTATTGTATTATTATCACTGGTTGGTTTAAA  50

seq1  TATTTAAATATTCATTT-ATTTATTTG--CTTATTTATTTATTTATTTAT  93
      ||||||||||||||||| ||| |||||   | |||||| |||||||||| 
seq2  TATTTAAATATTCATTTAATTAATTTGGCATAATTTATATATTTATTTAA  100

seq1  TTATTTATTTATTTATTTATTTATTTGCTTGTTTGTTGGTAATGAAGTTC  143
      ||| ||||||| ||||||  | |||||| |||||||||||||||||||||
seq2  TTAATTATTTAATTATTTTATAATTTGC-TGTTTGTTGGTAATGAAGTTC  149

seq1  TCATAGTATTGCCTCTGTTTGCCTAG-AACTAGCAAACCTCTTGAGGGCT  192
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCATAGTATTGCCTCTGTTTGCCTAGAAACTAGCAAACCTCTTGAGGGCT  199

seq1  GAAAC-AACCAGATGGTATTGCTGTACCTATCCC-AAAAATCCTTTTTCC  240
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAACAAACCAGATGGTATTGCTGTACCTATCCCAAAAAATCCTTTTTCC  249

seq1  TCATATCAACACAGACCTCGAAGTCTCTTAT-AAATTTTTTCACACACAT  289
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCATATCAACACAGACCTCGAAGTCTCTTATAAAATTTTTTCACACACAT  299

seq1  CTTTAAAATTCCCTAGATATCAATTATGCAACATTTTCTGTCCTGGAAAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATTCCCTAGATATCAATTATGCAACATTTTCTGTCCTGGAAAC  349

seq1  TAAAGAATATTATTAGAACATTATTCCTAGGGAAGATAGGTCAAGGGTTA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATTATTAGAACATTATTCCTAGGGAAGATAGGTCAAGGGTTA  399

seq1  AAAATCTACCTTTTTCATCCGAAGTAGGTATAAATTATGATCCTATACTT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTACCTTTTTCATCCGAAGTAGGTATAAATTATGATCCTATACTT  449

seq1  TTATTTAGGATCTTTCACTATTCCTATCAAAAATACCTCTAATTATTTAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGGATCTTTCACTATTCCTATCAAAAATACCTCTAATTATTTAC  499

seq1  CCAAGGCTGAATCCTACACCTGAGATCTAGCCATACTGCCCTAAAGAACT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCTGAATCCTACACCTGAGATCTAGCCATACTGCCCTAAAGAACT  549

seq1  CTCCTTTGTAAGAACTGTTAGCACTAAGCTCAGGACTAGGGAGGAATATG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTAAGAACTGTTAGCACTAAGCTCAGGACTAGGGAGGAATATG  599

seq1  AGGACATACTTTAATCAAAACTTTCCTTTCAAACCCAAGGGAAGACATCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATACTTTAATCAAAACTTTCCTTTCAAACCCAAGGGAAGACATCT  649

seq1  TCATAGAATCTACAGTTGCTAGAGCAGTAAGACTTTGGCAATTCCTGGTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAATCTACAGTTGCTAGAGCAGTAAGACTTTGGCAATTCCTGGTT  699

seq1  CTCACTTAGTCTCTGATAGTACACAACAGGAGAAAGCAATACAGTGTAGG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTAGTCTCTGATAGTACACAACAGGAGAAAGCAATACAGTGTAGG  749

seq1  GTCAGAGTGCTGAAGAAAGAAACGAGTTCATAGCCACCACTGCTGGAGGA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGTGCTGAAGAAAGAAACGAGTTCATAGCCACCACTGCTGGAGGA  799

seq1  TGGCATCTGGTGAAGCCCGTCACAATTATTTGGAAAGTGATACTAAGAAT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGGTGAAGCCCGTCACAATTATTTGGAAAGTGATACTAAGAAT  849

seq1  TCATTGCACTTGAAAGGTTCAAATTTACCATCAGCGGAATTC  881
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCACTTGAAAGGTTCAAATTTACCATCAGCGGAATTC  891