BAC Information

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BAC

Clone NameB6Ng01-205B07
Chromosome1 (Build37)
Map Location 42,240,373 - 42,241,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041441, LOC383634, LOC666582
Downstream gene2610017I09Rik, Pou3f3, Mrps9, Gpr45, LOC100041588, Tgfbrap1, AI597479, Fhl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205B07.bB6Ng01-205B07.g
ACCGA024856GA024857
length841817
definitionB6Ng01-205B07.b B6Ng01-205B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccagcttacagatgctcaaagtcggggttcattagagattctt
cattctctactttacccatcgcagtggtatctctaaactctttctttctt
tctccttttctttctttctttctccttttctttcttcctttctttctttc
tttctttctttctttcttccttccttccttccttcctttcttcctttctt
cctttcttggcttttttcaagacagggtttctctgtgtagccctggctgt
cctggaactcactctgtagaccaagctggtttcaaactcagaaatctgcc
tgcctctgccccccaagtgctgggattaaaggcgtgggtcaccaccgcct
gactttacctctaaactcttaaagttgctgaaccacactcagaaacctgt
tctacacatccacttctgccccctcatccacatctagctcaggagccctg
tttacctctgagcaagacctgggctccagtgcatcttgttaacacatcac
catccatctctcacccctccataaaggatctccctgctctcatgctcacc
ccttcctaattgatgctctgctgttaccattgttgtttgtgtgtttccca
acatcactgcagtaatatcaccagtagagagggggagaggagtagggcca
aggggaatgggagaggtcagtgaaagggagagggaggagtgttcagcaca
tataagacaggaccctgcttttaatctttgaaagagatacaatgggggat
ggatagtagagctgatgttttttgagatcatgaaccacttgctgtctcta
aaaataaacagaggatgcccaatttttcttcttctgagtgt
gaattctttgtttagctctgtaccccatttttaatagggttatttgattt
tctggagtccatcttcttgagttccttatatatattggatattagtcccc
tatctgatttaggattggaaaagatcctttcccaaactgttggtgatctt
tttgtctaattgacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcgattctcgatctcacagcacaagccattgctgttc
tgttcaggaattttttccctgtgcccatatcttcgaggcttttccctact
ctctcctctgtgatgttcagtgtttctggttttatgtggagttccttgat
ccacttcggagctgagatggaaggaaagaccatccagagactgcccccac
ccgggaattcatcctatatacaaccaccaaacccagacactattgcatat
gccagaaagatttttcttacaggaccctgatatagctcacccttgtgagg
ctatgcctgcgactggcaaatacagaagtggctgctcacagtcatctatt
ggatggcacacaggactcctaatgaaggagctagagaaagtacccaagga
gctaaaggggtctgcaacaacaatatgaactaaccagtaacccctgtagc
tgtgtctctagttgcatatgtaacagaggatggcctagtcaacaatcaag
ggaaggagtggcccttggtcttgggaagatcatatgccccagcacagggg
aatgccaggaagcagaagtgggtgggctggggagcagtttgtggggaggg
gtatagggggacttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_42240373_42241206
seq2: B6Ng01-205B07.b_47_887

seq1  GAATTCCCCAGCTTACAGATGCTCAAAGTCGGGGTTCATTAGAGATTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAGCTTACAGATGCTCAAAGTCGGGGTTCATTAGAGATTCTT  50

seq1  CATTCTCTACTTTACCCATCGCAGTGGTATCTCTAAACTCTTTCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTACTTTACCCATCGCAGTGGTATCTCTAAACTCTTTCTTTCTT  100

seq1  TCTCCTTTTCTTTCTTTCTTTCTCCTTTTCTTTCTTCCTTTCTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTCTTTCTTTCTTTCTCCTTTTCTTTCTTCCTTTCTTTCTTTC  150

seq1  TTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTCTT  200

seq1  CCTTTCTTGGCTTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTGGCTTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  250

seq1  CCTGGAACTCACTCTGTAGACCAAGCTGGTTTCAAACTCAGAAATCTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCACTCTGTAGACCAAGCTGGTTTCAAACTCAGAAATCTGCC  300

seq1  TGCCTCTGCCCCCCAAGTGCTGGGATTAAAGGCGTGGGTCACCACCGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCCCCCAAGTGCTGGGATTAAAGGCGTGGGTCACCACCGCCT  350

seq1  GACTTTACCTCTAAACTCTTAAAGTTGCTGAACCACACTCAGAAACCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTACCTCTAAACTCTTAAAGTTGCTGAACCACACTCAGAAACCTGT  400

seq1  TCTACACATCCACTTCTGCCCCCTCATCCACATCTAGCTCAGGAGCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACATCCACTTCTGCCCCCTCATCCACATCTAGCTCAGGAGCCCTG  450

seq1  TTTACCTCTGAGCAAGACCTGGGCTCCAGTGCATCTTGTTAACACATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCTGAGCAAGACCTGGGCTCCAGTGCATCTTGTTAACACATCAC  500

seq1  CATCCATCTCTCACCCCTCCATAAAGGATCTCCCTGCTCTCATGCTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCTCTCACCCCTCCATAAAGGATCTCCCTGCTCTCATGCTCACC  550

seq1  CCTTCCTAATTGATGCTCTGCTGTTACCATTGTTGTTTGTGTGTTTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTAATTGATGCTCTGCTGTTACCATTGTTGTTTGTGTGTTTCCCA  600

seq1  ACATCACTGCAGTAATATCACCAGTAGAGAGGGGGAGAGGAGTAGGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTGCAGTAATATCACCAGTAGAGAGGGGGAGAGGAGTAGGGCCA  650

seq1  AGGGGAATGGGAGAGGTCAGTGAAAGGGAGAGGGAGGAGTGTTCAGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATGGGAGAGGTCAGTGAAAGGGAGAGGGAGGAGTGTTCAGCACA  700

seq1  TATAAGACAGGACCCTGCTTTTAATCTTTGAAAGAGATACAAT-GGGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATAAGACAGGACCCTGCTTTTAATCTTTGAAAGAGATACAATGGGGGAT  750

seq1  GGA-AGTAGAGCTGATG-TTTTTGAGATCATG-AGCACTTGCTGCCACTA  796
      ||| ||||||||||||| |||||||||||||| | ||||||||| | |||
seq2  GGATAGTAGAGCTGATGTTTTTTGAGATCATGAACCACTTGCTGTCTCTA  800

seq1  AAAA-GAACAGA-GATGCACAA-TTTTCTTCATCTGAGTGT  834
      ||||  |||||| ||||| ||| |||||||| |||||||||
seq2  AAAATAAACAGAGGATGCCCAATTTTTCTTCTTCTGAGTGT  841