BAC Information

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BAC

Clone NameB6Ng01-205D12
Chromosome1 (Build37)
Map Location 130,898,180 - 131,033,838
singlet/doubletdoublet
Overlap genenone
Upstream geneZranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205D12.bB6Ng01-205D12.g
ACCGA024960GA024961
length63489
definitionB6Ng01-205D12.b B6Ng01-205D12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,033,205 - 131,033,838)(130,898,180 - 130,898,268)
sequence
gaattcatagccatatatgaaggacaaaaccaccagttcattgactttat
cgttctgttaacttgggacactctcataaattagatctgcaagggtcata
aaatgtgtctagtcccattttctcaattcccatggaagaacactgaaaag
cctacaagcttacgtcacacgactgaccatggtggtttcctaatgctcag
tgctctgtgtttcaaatgcatcacaccaagcatgctttgactgttgttgc
tgctgctgctgttgttaccttctaagtgctattcccacaagataacaaac
caaggaatgcaaactcagcaactacagaaaaggtcctcaggatcgcacta
cggggagctggaggggagatggatattgctgaagtgcctcccgtgcaagc
atgaagacctgagttttaattcccagcactgttgcggagaaaaagaaaaa
gccaggcttgtgctttaatcaatctcagggctgggaggcagagatgggat
ggtccccaaggctggccagtttgtctatctgaactgataagcctcaaaac
ataaggctgagaatgatgccagcctctgacttccatatgcatgctcgcaa
atgtgtgtgtgtgtgtgtgtgtgtgtgggagaga
tgacttaagaagaaagttatgggtcatgggaagatattagagaccaagtg
tgtgtgtgtgtgtgtgtgtgtgtgagagagaggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131033205_131033838
seq2: B6Ng01-205D12.b_49_682 (reverse)

seq1  TCTCTCCCACACACACACACACACACACACACATTTGCGAGCATGCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCACACACACACACACACACACACACATTTGCGAGCATGCATAT  50

seq1  GGAAGTCAGAGGCTGGCATCATTCTCAGCCTTATGTTTTGAGGCTTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAGAGGCTGGCATCATTCTCAGCCTTATGTTTTGAGGCTTATCA  100

seq1  GTTCAGATAGACAAACTGGCCAGCCTTGGGGACCATCCCATCTCTGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATAGACAAACTGGCCAGCCTTGGGGACCATCCCATCTCTGCCTC  150

seq1  CCAGCCCTGAGATTGATTAAAGCACAAGCCTGGCTTTTTCTTTTTCTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTGAGATTGATTAAAGCACAAGCCTGGCTTTTTCTTTTTCTCCG  200

seq1  CAACAGTGCTGGGAATTAAAACTCAGGTCTTCATGCTTGCACGGGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGCTGGGAATTAAAACTCAGGTCTTCATGCTTGCACGGGAGGCA  250

seq1  CTTCAGCAATATCCATCTCCCCTCCAGCTCCCCGTAGTGCGATCCTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCAATATCCATCTCCCCTCCAGCTCCCCGTAGTGCGATCCTGAGG  300

seq1  ACCTTTTCTGTAGTTGCTGAGTTTGCATTCCTTGGTTTGTTATCTTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCTGTAGTTGCTGAGTTTGCATTCCTTGGTTTGTTATCTTGTGG  350

seq1  GAATAGCACTTAGAAGGTAACAACAGCAGCAGCAGCAACAACAGTCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCACTTAGAAGGTAACAACAGCAGCAGCAGCAACAACAGTCAAAG  400

seq1  CATGCTTGGTGTGATGCATTTGAAACACAGAGCACTGAGCATTAGGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGGTGTGATGCATTTGAAACACAGAGCACTGAGCATTAGGAAAC  450

seq1  CACCATGGTCAGTCGTGTGACGTAAGCTTGTAGGCTTTTCAGTGTTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGTCAGTCGTGTGACGTAAGCTTGTAGGCTTTTCAGTGTTCTTC  500

seq1  CATGGGAATTGAGAAAATGGGACTAGACACATTTTATGACCCTTGCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAATTGAGAAAATGGGACTAGACACATTTTATGACCCTTGCAGAT  550

seq1  CTAATTTATGAGAGTGTCCCAAGTTAACAGAACGATAAAGTCAATGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTATGAGAGTGTCCCAAGTTAACAGAACGATAAAGTCAATGAACT  600

seq1  GGTGGTTTTGTCCTTCATATATGGCTATGAATTC  634
      ||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTTGTCCTTCATATATGGCTATGAATTC  634

seq1: chr1_130898180_130898268
seq2: B6Ng01-205D12.g_72_160

seq1  TGACTTAAGAAGAAAGTTATGGGTCATGGGAAGATATTAGAGACCAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAGAAGAAAGTTATGGGTCATGGGAAGATATTAGAGACCAAGTG  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGGGGGGGA  89
      |||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGGGGGGGA  89