BAC Information

Click to search

BAC

Clone NameB6Ng01-205P23
Chromosome1 (Build37)
Map Location 100,713,837 - 100,714,696
singlet/doubletsinglet
Overlap genenone
Upstream genePam, LOC100041823, LOC666153, LOC100040887, Slco6d1, LOC100041868, EG666182
Downstream geneC230078M14Rik, LOC633295
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205P23.bB6Ng01-205P23.g
ACCGA025530GA025531
length1,0961,022
definitionB6Ng01-205P23.b B6Ng01-205P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ctaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttatgttattccagaca
aatttgcaaattgctctttccaattcgttgaagaattgagttggaatttt
gatgggggattgcatttgaatctgtagattgcttttggcaagatagccat
ttttacaatgtttgatcctgccaatccatgagcatgggagatcttccatc
tttctgagatcttccttaatttcttttcttcagagatttgaagtttttat
catacagatctttcacttcccttagtttagagtcacgcccaagattattt
ttatattatttgtgactaatttgagaagggtgttgtttccctaatttctt
tcctcagccctgtttaattcctttgtatagagaaaggccattgaaccttg
tttggagtttatttataatccagctactttcactcgaaggctgtgt

gaattctgaaaatcatcaggaaaatgagagagtacctgaactagctgctt
gtgacttgccactgactccaagtcattattgagtcagcactgttcccatt
cctgctgttctctgcaccttctcgtgctgaggctggaccttggcataaga
acaagggagaggacagaataggagcaatgtttcaacggatactaataatt
gtttagatttctttaattgctttgaatattttaattgtaaacatgttgac
agttatacatttgttggttatggtgttaaaaatcctttgtgagagagctt
aaaataaaacaagcctaaagagaaaggggattgctagtttaaatcaatca
atacttttgatgattttgggttgctggaccaaggacatactattgttgga
atgatactcaaagtttttgttaataggaaagaagaaaaggttttggacct
cttcctgagtgacatggatcagatatgatcagagtagactccctaaacat
catgactacagatatgaataaccaaaaagatcaaataagatagataactg
atttcctaattcctaaacatggaaacaacactgtaactgatttagacata
aaaatgtctctagccaaaactttggctaaaattaaacaatacattttgtt
ggttacaaaatccttaaaatgaatcatgacatctttcacatggcatgaat
aaagatctattataattggtcattgatcaaattaactcataaaaaggtaa
ttgtcgttcacctatacaaacaaagaacaatacattacttaactgctcag
tacagcttatatcatccatatggacatcttaataatactacaattttcat
aataagattcagatgttacaaaatatacagctctggcaacattcatcctc
agggtcactagcgacctgctgctccagctctcttccatctgatgctattt
ctagagacttcttccaaaacatcttcaaaataactgctgattcatgatga
tctcagttcatccagtctttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_100713837_100714696
seq2: B6Ng01-205P23.g_66_925

seq1  GAATTCTGAAAATCATCAGGAAAATGAGAGAGTACCTGAACTAGCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAATCATCAGGAAAATGAGAGAGTACCTGAACTAGCTGCTT  50

seq1  GTGACTTGCCACTGACTCCAAGTCATTATTGAGTCAGCACTGTTCCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTGCCACTGACTCCAAGTCATTATTGAGTCAGCACTGTTCCCATT  100

seq1  CCTGCTGTTCTCTGCACCTTCTCGTGCTGAGGCTGGACCTTGGCATAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGTTCTCTGCACCTTCTCGTGCTGAGGCTGGACCTTGGCATAAGA  150

seq1  ACAAGGGAGAGGACAGAATAGGAGCAATGTTTCAACGGATACTAATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAGAGGACAGAATAGGAGCAATGTTTCAACGGATACTAATAATT  200

seq1  GTTTAGATTTCTTTAATTGCTTTGAATATTTTAATTGTAAACATGTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATTTCTTTAATTGCTTTGAATATTTTAATTGTAAACATGTTGAC  250

seq1  AGTTATACATTTGTTGGTTATGGTGTTAAAAATCCTTTGTGAGAGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATACATTTGTTGGTTATGGTGTTAAAAATCCTTTGTGAGAGAGCTT  300

seq1  AAAATAAAACAAGCCTAAAGAGAAAGGGGATTGCTAGTTTAAATCAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACAAGCCTAAAGAGAAAGGGGATTGCTAGTTTAAATCAATCA  350

seq1  ATACTTTTGATGATTTTGGGTTGCTGGACCAAGGACATACTATTGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTGATGATTTTGGGTTGCTGGACCAAGGACATACTATTGTTGGA  400

seq1  ATGATACTCAAAGTTTTTGTTAATAGGAAAGAAGAAAAGGTTTTGGACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTCAAAGTTTTTGTTAATAGGAAAGAAGAAAAGGTTTTGGACCT  450

seq1  CTTCCTGAGTGACATGGATCAGATATGATCAGAGTAGACTCCCTAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAGTGACATGGATCAGATATGATCAGAGTAGACTCCCTAAACAT  500

seq1  CATGACTACAGATATGAATAACCAAAAAGATCAAATAAGATAGATAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTACAGATATGAATAACCAAAAAGATCAAATAAGATAGATAACTG  550

seq1  ATTTCCTAATTCCTAAACATGGAAACAACACTGTAACTGATTTAGACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAATTCCTAAACATGGAAACAACACTGTAACTGATTTAGACATA  600

seq1  AAAATGTCTCTAGCCAAAACTTTGGCTAAAATTAAACAATACATTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCTCTAGCCAAAACTTTGGCTAAAATTAAACAATACATTTTGTT  650

seq1  GGTTACAAAATCCTTAAAATGAATCATGACATCTTTCACATGGCATGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAAAATCCTTAAAATGAATCATGACATCTTTCACATGGCATGAAT  700

seq1  AAAGATCTATTATAATTGGTCATTGATCAAATTAACTCATAAAAAGGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTATTATAATTGGTCATTGATCAAATTAACTCATAAAAAGGTAA  750

seq1  TTGTCGTTCACCTATACAAACAAAGAACAATACATTACTTAACTGCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTTCACCTATACAAACAAAGAACAATACATTACTTAACTGCTCAG  800

seq1  TACAGCTTATATCATCCATATGGACATCTTAATAATACTACAATTTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTATATCATCCATATGGACATCTTAATAATACTACAATTTTCAT  850

seq1  AATAAGATTC  860
      ||||||||||
seq2  AATAAGATTC  860


| Home | SequenceCutter | Blast | Download |