BAC Information

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BAC

Clone NameB6Ng01-206B22
Chromosome1 (Build37)
Map Location 186,495,052 - 186,630,610
singlet/doubletdoublet
Overlap geneLOC666714, Hlx1, Mosc1
Upstream geneEG666649, 1700056E22Rik, Dusp10, EG433387, EG629032
Downstream geneMosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206B22.bB6Ng01-206B22.g
ACCGA025616GA025617
length1,1091,058
definitionB6Ng01-206B22.b B6Ng01-206B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(186,629,511 - 186,630,610)(186,495,052 - 186,496,116)
sequence
gaattcattcagatggtccagtacttgcctaccataatatacaagaagct
ctggttttactctccaatactacatcatctaggcatgatggtacacacct
gtaattccagtgctgaagaggtaggggcaggaagatctgaagttcagggt
catccgtggctgtatggtgaatttgaggtcagcctgggctacatgaaatc
ctggctttacatagataggtcagtaggtagatagttaaatctagactcca
aataaaacagaaaacactgttaacagttagccatcgaccgcacaggaccc
ctcagtactccgtcctctgcatgagaggggaaatgagaaagctgcttcaa
aagctagtgtgaggacaagggacacaacgcccagcgtagcaagctgagga
tgtggtgcagtggtagagcactcgcctagcatactggaagctctgggttt
gaaccccaactcaacacaaacaaactaattaaataaattactatgtagaa
agcaatgggggccaaagcacgctgaacataaagctaagagaaaaataata
atcccatcaaagattccaggacaaaactgggtatagggagggaaggtgtc
ctagaagaggggagtcctaatctgtcccaggactgtccttgcatagggtc
tggtaacgatgccctgttagatatgatattcagctcaaagaggggaaatt
acaaagtggagaagaacagaggtgtcttgtgttcagtttgcggaaggagg
tcattgcttgggctttcgatacgcaagcctgcttcctgagccctgatgct
ggtgggctgagggaagggaggtgctctggggcctgacctagcagctaaga
gcctgcagcagaatttccctttttctcattgtgggaaaatgatttggctt
aattatatttttgttattatttctgtatttttaatttaatatgccacatg
agttgggtgtgatggcacacacccttggagcctcagcactcgggaggcca
gaagccaggctgatcttctgttagtcaagcccagccctagtaatacatag
tgagttcagggacagcccaggggctaaacagagtagccttatcttaaaca
aaccaacaa
gaattcccagagatgctttataaagtagctaaccagtctatacttgaata
gctcggccatcagaagcaggaaacgccaatcaatggtaagtgttacgaca
tcttgctctgaaaatggtcgggaaggactgggttgtggaataccaatgag
ttggtcaagacatttgctttgcatcttctagacagttagaacccatcagc
tcccattgttatcatctgggaatcttgattgagttggttttctctacctg
ttaaagaattttctaaaggtcctgagttcaattcccagcaaccacatggc
ggctcaccaccatctgtaatgggaatccgatgccctcttctggtgtgtct
gaagacagtgacagtgttacttacatacctgaaataaatctttaaaaaaa
aaaaagaaaagaaaagaaaagcactgggcgtggtggcacatgcctttaat
cccagcacttgggaggcagaggcaggcggatttctgacttctaggccact
ctggtctacagagtgagctctaggacagccagggctacacagagaaaccc
tgtcttgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaa
aaaaaaaatggaaaaagaaaaaaaaaaaggaaaactctcaaatgcacagg
aaaagactcaaacaccgcagaaagagtcagccaatggagaaaggcttttt
attagaggtggggaaacattcacatacagcaaggcacacagaaaaatatt
ctgtaaagcaagggaggcacttcggagcccaaaatccagtcttttccttg
agagatggtgatttttttttctcatttatttattcactttcccatcacaa
tttgcagccctccctatcctcccagttccctcctttcaccacaccctctt
tcccccatacctccttcttcttgaggtgtcagattaggatgtactcggag
ggctagggtttaaggtctttgggacaccttcatccctatttaggtgatcc
acttgacaaggatgggagctgtaggccacactagaggaaacatatctgtg
ctgacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186629511_186630610
seq2: B6Ng01-206B22.b_48_1156 (reverse)

seq1  TTGTTTGTTTGTTTAAAGATAGGGCTACTCTGTTTAGCCC--TGGCTGTC  48
      ||||| |||||||| |||||| ||||||||||||||||||   |||||||
seq2  TTGTTGGTTTGTTT-AAGATAAGGCTACTCTGTTTAGCCCCTGGGCTGTC  49

seq1  CTGGAACTCACTATGTA-TACTA-GGCTGGCCTTGAACTTACAG-AGATC  95
      |  |||||||||||||| ||||| |||||| |||| ||| |||| |||||
seq2  CCTGAACTCACTATGTATTACTAGGGCTGGGCTTG-ACTAACAGAAGATC  98

seq1  AGCCT-GCCTCT-GCCTCCCGAGTGCTGAGGCTC--AAGGTGTGTGCCAT  141
      ||||| || ||| |||||||||||||||||||||  | ||||||||||||
seq2  AGCCTGGCTTCTGGCCTCCCGAGTGCTGAGGCTCCAAGGGTGTGTGCCAT  148

seq1  CACACCCAACTCATGTGGCATA-TAAATTAAAAATACAGAAATAATAACA  190
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACACCCAACTCATGTGGCATATTAAATTAAAAATACAGAAATAATAACA  198

seq1  AAAATATAATTAAGCCAAATCATTTTCCCACAATGAGAAAAA-GGAAATT  239
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAATATAATTAAGCCAAATCATTTTCCCACAATGAGAAAAAGGGAAATT  248

seq1  CTGCTGCAGGCTCTTAGCTGCTAGGTCAGGCCCCAGAGCACCTCCCTTCC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCAGGCTCTTAGCTGCTAGGTCAGGCCCCAGAGCACCTCCCTTCC  298

seq1  CTCAGCCCACCAGCATCAGGGCTCAGGAAGCAGGCTTGCGTATCGAAAGC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCACCAGCATCAGGGCTCAGGAAGCAGGCTTGCGTATCGAAAGC  348

seq1  CCAAGCAATGACCTCCTTCCGCAAACTGAACACAAGACACCTCTGTTCTT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAATGACCTCCTTCCGCAAACTGAACACAAGACACCTCTGTTCTT  398

seq1  CTCCACTTTGTAATTTCCCCTCTTTGAGCTGAATATCATATCTAACAGGG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTTGTAATTTCCCCTCTTTGAGCTGAATATCATATCTAACAGGG  448

seq1  CATCGTTACCAGACCCTATGCAAGGACAGTCCTGGGACAGATTAGGACTC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTACCAGACCCTATGCAAGGACAGTCCTGGGACAGATTAGGACTC  498

seq1  CCCTCTTCTAGGACACCTTCCCTCCCTATACCCAGTTTTGTCCTGGAATC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCTAGGACACCTTCCCTCCCTATACCCAGTTTTGTCCTGGAATC  548

seq1  TTTGATGGGATTATTATTTTTCTCTTAGCTTTATGTTCAGCGTGCTTTGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGGATTATTATTTTTCTCTTAGCTTTATGTTCAGCGTGCTTTGG  598

seq1  CCCCCATTGCTTTCTACATAGTAATTTATTTAATTAGTTTGTTTGTGTTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATTGCTTTCTACATAGTAATTTATTTAATTAGTTTGTTTGTGTTG  648

seq1  AGTTGGGGTTCAAACCCAGAGCTTCCAGTATGCTAGGCGAGTGCTCTACC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGGTTCAAACCCAGAGCTTCCAGTATGCTAGGCGAGTGCTCTACC  698

seq1  ACTGCACCACATCCTCAGCTTGCTACGCTGGGCGTTGTGTCCCTTGTCCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACCACATCCTCAGCTTGCTACGCTGGGCGTTGTGTCCCTTGTCCT  748

seq1  CACACTAGCTTTTGAAGCAGCTTTCTCATTTCCCCTCTCATGCAGAGGAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAGCTTTTGAAGCAGCTTTCTCATTTCCCCTCTCATGCAGAGGAC  798

seq1  GGAGTACTGAGGGGTCCTGTGCGGTCGATGGCTAACTGTTAACAGTGTTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACTGAGGGGTCCTGTGCGGTCGATGGCTAACTGTTAACAGTGTTT  848

seq1  TCTGTTTTATTTGGAGTCTAGATTTAACTATCTACCTACTGACCTATCTA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTATTTGGAGTCTAGATTTAACTATCTACCTACTGACCTATCTA  898

seq1  TGTAAAGCCAGGATTTCATGTAGCCCAGGCTGACCTCAAATTCACCATAC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGCCAGGATTTCATGTAGCCCAGGCTGACCTCAAATTCACCATAC  948

seq1  AGCCACGGATGACCCTGAACTTCAGATCTTCCTGCCCCTACCTCTTCAGC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACGGATGACCCTGAACTTCAGATCTTCCTGCCCCTACCTCTTCAGC  998

seq1  ACTGGAATTACAGGTGTGTACCATCATGCCTAGATGATGTAGTATTGGAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATTACAGGTGTGTACCATCATGCCTAGATGATGTAGTATTGGAG  1048

seq1  AGTAAAACCAGAGCTTCTTGTATATTATGGTAGGCAAGTACTGGACCATC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACCAGAGCTTCTTGTATATTATGGTAGGCAAGTACTGGACCATC  1098

seq1  TGAATGAATTC  1100
      |||||||||||
seq2  TGAATGAATTC  1109

seq1: chr1_186495052_186496116
seq2: B6Ng01-206B22.g_69_1126

seq1  GAATTCCCAGAGATGCTTTATAAAGTAGCTAACCAGTCTATACTTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGATGCTTTATAAAGTAGCTAACCAGTCTATACTTGAATA  50

seq1  GCTCGGCCATCAGAAGCAGGAAACGCCAATCAATGGTAAGTGTTACGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGCCATCAGAAGCAGGAAACGCCAATCAATGGTAAGTGTTACGACA  100

seq1  TCTTGCTCTGAAAATGGTCGGGAAGGACTGGGTTGTGGAATACCAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCTGAAAATGGTCGGGAAGGACTGGGTTGTGGAATACCAATGAG  150

seq1  TTGGTCAAGACATTTGCTTTGCATCTTCTAGACAGTTAGAACCCATCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCAAGACATTTGCTTTGCATCTTCTAGACAGTTAGAACCCATCAGC  200

seq1  TCCCATTGTTATCATCTGGGAATCTTGATTGAGTTGGTTTTCTCTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGTTATCATCTGGGAATCTTGATTGAGTTGGTTTTCTCTACCTG  250

seq1  TTAAAGAATTTTCTAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATTTTCTAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGC  300

seq1  GGCTCACCACCATCTGTAATGGGAATCCGATGCCCTCTTCTGGTGTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACCACCATCTGTAATGGGAATCCGATGCCCTCTTCTGGTGTGTCT  350

seq1  GAAGACAGTGACAGTGTTACTTACATACCTGAAATAAATCTTTAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGTGACAGTGTTACTTACATACCTGAAATAAATCTTTAAAAAAA  400

seq1  AAAAAGAAAAGAAAAGAAAAGCACTGGGCGTGGTGGCACATGCCTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAGAAAAGAAAAGCACTGGGCGTGGTGGCACATGCCTTTAAT  450

seq1  CCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGACTTCTAGGCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGACTTCTAGGCCACT  500

seq1  CTGGTCTACAGAGTGAGCTCTAGGACAGCCAGGGCTACACAGAGAAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGAGCTCTAGGACAGCCAGGGCTACACAGAGAAACCC  550

seq1  TGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  600
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTCTTGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAA  600

seq1  AAAAAAAAAAGAAAAAGAAAAAAAAAAAGGAAAACTCTCAAATGCACAGG  650
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATGGAAAAAGAAAAAAAAAAAGGAAAACTCTCAAATGCACAGG  650

seq1  AAAAGACTCAAACACCGCAGAAAGAGTCAGCCAATGGAGAAAGGC-TTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAAGACTCAAACACCGCAGAAAGAGTCAGCCAATGGAGAAAGGCTTTTT  700

seq1  ATTAGAGGTGGGGAAACATTCACATACAGCAAGGCACACAGAAAAATATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGGTGGGGAAACATTCACATACAGCAAGGCACACAGAAAAATATT  750

seq1  CTGTAAAGCAAGGGAGGCACTTCGGAGCCCAAAATCCAGTC-TTTCCTTG  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTAAAGCAAGGGAGGCACTTCGGAGCCCAAAATCCAGTCTTTTCCTTG  800

seq1  AGAGATGGTGA-TTTTTTTTCTCATTTATTTATTCACTTT-CCATCACAA  846
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  AGAGATGGTGATTTTTTTTTCTCATTTATTTATTCACTTTCCCATCACAA  850

seq1  -TTGCAGCCC-CCCTATCCTCCCAG-TCCCTCC-TTCA-CACAACC-CCT  890
       ||||||||| |||||||||||||| ||||||| |||| |||| || | |
seq2  TTTGCAGCCCTCCCTATCCTCCCAGTTCCCTCCTTTCACCACACCCTCTT  900

seq1  TCCCCCATACCTCCTTCTCCTTGAGGTGTCAGAATAGGATGGTACTCGGA  940
      |||||||||||||||||| |||||||||||||| |||||| |||||||||
seq2  TCCCCCATACCTCCTTCTTCTTGAGGTGTCAGATTAGGAT-GTACTCGGA  949

seq1  GGGCTAGGGGTTTTAAGGGTCTTTGGGACACCTTCATCCCTAATTTAAGG  990
      |||||||||  ||||| |||||||||||||||||||||||| |||||  |
seq2  GGGCTAGGG--TTTAA-GGTCTTTGGGACACCTTCATCCCT-ATTTA--G  993

seq1  TTGATCACTTTGAACAAAGATGGGGAAGCTGGTAAGCCCACAACTTAGAG  1040
       |||||   ||| |||| ||||||  |||||   || |||||   |||||
seq2  GTGATCCACTTG-ACAAGGATGGG--AGCTG--TAGGCCACA--CTAGAG  1036

seq1  GAAAACATATCCTGGTGCTGACCTT  1065
      | |||||||||   |||||||| ||
seq2  G-AAACATATC--TGTGCTGACTTT  1058