BAC Information

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BAC

Clone NameB6Ng01-206D20
Chromosome1 (Build37)
Map Location 16,635,663 - 16,636,749
singlet/doubletsinglet
Overlap geneTceb1
Upstream geneKcnb2, Ppia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2, Ube2w
Downstream geneLOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206D20.bB6Ng01-206D20.g
ACCGA025707GA025708
length5001,094
definitionB6Ng01-206D20.b B6Ng01-206D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctacaagcagatttttttttctttccattttttattaggtat
ttagctcatttacatttccaatgctataccaaaagtgccccatacccacc
cacccccactcccctacccgcccactccccctttttggccctggcgttcc
cctgttctggggcatataaagtttgtgtgtccaatgggcctctctttcca
gtgatggccgactaggccctcttttgatacatatgcagctagagtcaaga
gctccggggtactggttagttcataatgttgatccacctatagggttgca
gatccctttagctccttgggtactttctctagctcctccattgggagccc
tgtgatccatccattagctgactgtgggcatccacttctgtgtttgctag
gccccggcatagtctcacaagagacagctacatctgggtcctttcgataa
aatcttgctagtgtatgcaatggtgtcagcgtttggatgctgattatggg

gaattcccatgcttttattgtaataattacaagagctgtatagtgtcaaa
cccttttcagggacctggagagatcgatatctcagtggataaagggcatg
gtgtgaaaacaccaggactccaagcccctgtaacctttgaaaaggtcttg
catttgggagctagctacttgttcaaagactggaatttgtcttgtatggg
tttagattcagatgaaacatctttgacagaaatggtgattttaatcctaa
tctttgtgtagggatttctgagtgtggatgtttatagatgaacagaacaa
tcatcttgattcttccacattgtcgagcttcctaagatttcagaataaga
ttttaaatgcttttatataatggtaattacaaaagacacaagaaaaaacc
ttgaggtatataaaagcatgtatttttttttttttaaagatttatttatt
tattatatgtaagtacactgtagttgtcttcagatacaccagaagagggc
accagatctcattacgggtggttgtgagccaccatgtggttgctgggatt
tgaacttcagaccttcggaagagcagtcgggtgcccttacccactgagcc
atctcaccagccccaaaagcatgtattttgttattatattatccctagca
gaaaattgtagtgaagctagcacagtggcaatggtggcatcagtagaaca
acaactacacacctgtcctcacctctaatgtgatttttttttcccttttc
catgctgagcaatcaaacttgtgtgctaagaacatgctctgctgctaagc
atggaccatgactacattaattttactgcttttatctcagatggagagga
gaagacctatggtggctgtgaaggccctgatgctatgtatgtgaaattaa
tatcttctgatggccatgaatttattgtaaaagagaacatgcactaacat
caggaacaataaagctatgtttgagtggtccaggtaggttaatacgggga
cgtttcttcaatatatatccttttaatgtctattgatgtatttccagtta
gctatgcatgccgaggaagagaagagcatagacagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_16635663_16636749
seq2: B6Ng01-206D20.g_69_1162 (reverse)

seq1  TCTCTCTCTCTCTC--------TCTCTCTCTCGCCATGCATAGCTAACTT  42
      ||||||||||| ||        |||||  |||| ||||||||||||||| 
seq2  TCTCTCTCTCTGTCTATGCTCTTCTCTTCCTCGGCATGCATAGCTAACTG  50

seq1  GAAATACATTCATTAGACATTAAAAGGATATATATGAAGGAAACGTCACC  92
      |||||||| ||| ||||||||||||||||||||||  | |||||||| ||
seq2  GAAATACA-TCAATAGACATTAAAAGGATATATATTGAAGAAACGTCCCC  99

seq1  GTATTTACCTACCTGGACCACTC-AACATAGCCTTTATTGTTCCTGATGT  141
      ||||| ||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GTATTAACCTACCTGGACCACTCAAACATAG-CTTTATTGTTCCTGATGT  148

seq1  TAGTGCATGTTCTCTTTTTACAATAAATTCATGGCCATCAGAAGATATTA  191
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGTGCATGTTCTC-TTTTACAATAAATTCATGGCCATCAGAAGATATTA  197

seq1  ATTTCACATACATAGCATCAGGGCCTTCACAGCCACCATAGGTCTTCTCC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACATACATAGCATCAGGGCCTTCACAGCCACCATAGGTCTTCTCC  247

seq1  TCTCCATCTGAGAT-AAAGCAGTAAAATTAATGTAGTCATGGTCCATGCT  290
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCCATCTGAGATAAAAGCAGTAAAATTAATGTAGTCATGGTCCATGCT  297

seq1  TAGCAGCAGAGCATGTTCTTAGCACACAAGTTTGATTGCTCAGCATGGAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAGAGCATGTTCTTAGCACACAAGTTTGATTGCTCAGCATGGAA  347

seq1  AAGGGAAAAAAAAATCACATTAGAGGTGAGGACAGGTGTGTAGTTGTTGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAAAAAATCACATTAGAGGTGAGGACAGGTGTGTAGTTGTTGT  397

seq1  TCTACTGATGCCACCATTGCCACTGTGCTAGCTTCACTACAATTTTCTGC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGATGCCACCATTGCCACTGTGCTAGCTTCACTACAATTTTCTGC  447

seq1  TAGGGATAATATAATAACAAAATACATGCTTTTGGGGCTGGTGAGATGGC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATAATATAATAACAAAATACATGCTTTTGGGGCTGGTGAGATGGC  497

seq1  TCAGTGGGTAAGGGCACCCGACTGCTCTTCCGAAGGTCTGAAGTTCAAAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGGTAAGGGCACCCGACTGCTCTTCCGAAGGTCTGAAGTTCAAAT  547

seq1  CCCAGCAACCACATGGTGGCTCACAACCACCCGTAATGAGATCTGGTGCC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACATGGTGGCTCACAACCACCCGTAATGAGATCTGGTGCC  597

seq1  CTCTTCTGGTGTATCTGAAGACAACTACAGTGTACTTACATATAATAAAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGTATCTGAAGACAACTACAGTGTACTTACATATAATAAAT  647

seq1  AAATAAATCTTTAAAAAAAAAAAAATACATGCTTTTATATACCTCAAGGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCTTTAAAAAAAAAAAAATACATGCTTTTATATACCTCAAGGT  697

seq1  TTTTTCTTGTGTCTTTTGTAATTACCATTATATAAAAGCATTTAAAATCT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTGTGTCTTTTGTAATTACCATTATATAAAAGCATTTAAAATCT  747

seq1  TATTCTGAAATCTTAGGAAGCTCGACAATGTGGAAGAATCAAGATGATTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAAATCTTAGGAAGCTCGACAATGTGGAAGAATCAAGATGATTG  797

seq1  TTCTGTTCATCTATAAACATCCACACTCAGAAATCCCTACACAAAGATTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCATCTATAAACATCCACACTCAGAAATCCCTACACAAAGATTA  847

seq1  GGATTAAAATCACCATTTCTGTCAAAGATGTTTCATCTGAATCTAAACCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAATCACCATTTCTGTCAAAGATGTTTCATCTGAATCTAAACCC  897

seq1  ATACAAGACAAATTCCAGTCTTTGAACAAGTAGCTAGCTCCCAAATGCAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGACAAATTCCAGTCTTTGAACAAGTAGCTAGCTCCCAAATGCAA  947

seq1  GACCTTTTCAAAGGTTACAGGGGCTTGGAGTCCTGGTGTTTTCACACCAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTTCAAAGGTTACAGGGGCTTGGAGTCCTGGTGTTTTCACACCAT  997

seq1  GCCCTTTATCCACTGAGATATCGATCTCTCCAGGTCCCTGAAAAGGGTTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTATCCACTGAGATATCGATCTCTCCAGGTCCCTGAAAAGGGTTT  1047

seq1  GACACTATACAGCTCTTGTAATTATTACAATAAAAGCATGGGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTATACAGCTCTTGTAATTATTACAATAAAAGCATGGGAATTC  1094