BAC Information

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BAC

Clone NameB6Ng01-206L06
Chromosome1 (Build37)
Map Location 130,623,130 - 130,623,668
singlet/doubletsinglet
Overlap genenone
Upstream geneAcmsd, Ccnt2, Ysk4, Rab3gap1, Zranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206L06.bB6Ng01-206L06.g
ACCGA026053GA026054
length1,046782
definitionB6Ng01-206L06.b B6Ng01-206L06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatacagaatggctgagaagcacctaaaacaatg
ttcaacatccagtcatcagagaaatgcaaatcaaaataaccctgagattc
cacctcacaccagtcagaatggctaagataaaaaactcaggtgacagtag
atgctggcaaggatgtggagatgggattgcaagctgatacaaccactctg
gaaatcagtttggcagtttctcagaaaactggacatagtactaccagagg
atccagcaataccactcctgggcatatacccagaagacactccaacatgt
aataagtacatgttccactatgttcatagcagccttatttataatagcca
gaagctggaaaaaaaacccagatgttcctcaatagaggaatagatccaaa
aaaatgtggtatatttacacaatggagtactactcagctattaaaaacaa
ttaatttatgaaattcttagacaaatggatggatctggaggatatcatcc
tgagtgaggtaacccaatcacaaaagaatacacatgatatgcactcactg
ataagtggatattagcccagaagctcagaatacccaagatacaattcaca
aaacacatgaaactcaagaagaaggaagaccaaagtgtgaatccttctat
ccttcttagaaggaggaacaaaatacccatggaaggagttacagagacaa
agtatgaagcagagactgaaggcatgaccatccagaggctaccccacctg
gggatccatctcataaacaaccaccaaacccagacactattgtgaatgcc
aacaagagcttgcggacaggagcctgataaagctgagagcctctgccagt
gcctgacaaatacagaagtggattatcacagccatcaattggacggagca
cagggtccccaatgaaggagctagagaaagtacccaaggaactgaagggt
tttgcagtttcattaggaggatcaacattattccaaacaattattgccaa
ttccatgaacaggaggtacattgttccagagggggcctgtttagct
gaattcttgtcctcacgcttgtgggacaatcaccttaactctgagccaag
tccccagaacatccctgatccctcccgatcctcccacctccctggaatta
cagagaaagtaccgctgactggggccttggagtaggcacggaacacaccc
agacacaaagttctcagcacaaaggagaagattaccctggagggacactg
ggtgggtgtgagggtctacctcttagcggacaaaggcagcatcaggtgtc
tctagtttttaagggggaagtctgtgttagggtgagttggttaaaaactg
gattggacaagttgagctgatctagccagataatgaattttgattgctgg
gccttggtattttgatagttagatcttggtgttttgtctcaagaataagt
taggcacaaggaagtggccaaataagggggggaaaccttgggggctttct
ctaggaatgtaatttaacagttaagcaagtgggagggaagcagggaaggg
caagacctgcaagagccgtgtttgcaatgcttgacctgttaagagagcct
gtcagccactacaactggtttacacaaattctggggatcaaattctggga
agtgcctcccacatggtaggcaagcacactactaactgagctacatccag
gtccacagattgattcctgacagcaaatgccgatataacacaagataggt
aggtagatagattgattgacagataaattgatagatagatagatagatta
gatagatagattgatagataggatagatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_130623130_130623668
seq2: B6Ng01-206L06.b_547_1091

seq1  GAGTGAGGTAACCCAATCACAAAAGAATACACATGATATGCACTCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGTAACCCAATCACAAAAGAATACACATGATATGCACTCACTGA  50

seq1  TAAGTGGATATTAGCCCAGAAGCTCAGAATACCCAAGATACAATTCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGATATTAGCCCAGAAGCTCAGAATACCCAAGATACAATTCACAA  100

seq1  AACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGAATCCTTCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGAAACTCAAGAAGAAGGAAGACCAAAGTGTGAATCCTTCTATC  150

seq1  CTTCTTAGAAGGAGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGAAGGAGGAACAAAATACCCATGGAAGGAGTTACAGAGACAAA  200

seq1  GTATGAAGCAGAGACTGAAGGCATGACCATCCAGAGGCTACCCCACCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAGCAGAGACTGAAGGCATGACCATCCAGAGGCTACCCCACCTGG  250

seq1  GGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGTGAATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATCTCATAAACAACCACCAAACCCAGACACTATTGTGAATGCCA  300

seq1  ACAAGAGCTTGCGGACAGGAGCCTGATAAAGCTGAGAGCCTCTGCCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCTTGCGGACAGGAGCCTGATAAAGCTGAGAGCCTCTGCCAGTG  350

seq1  CCTGACAAATACAGAAGTGGATTATCACAGCCATCAATTGGACGGAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACAAATACAGAAGTGGATTATCACAGCCATCAATTGGACGGAGCAC  400

seq1  AGGGTCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACTGAAGGGAT  450
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGGGTCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGGAACTGAAGGGTT  450

seq1  TTGCAGTTCCA-TAAGAGGAACAACAATA-TCCAAACAAT--ATGCCAAA  496
      |||||||| || || ||||| ||||| || ||||||||||   |||||| 
seq2  TTGCAGTTTCATTAGGAGGATCAACATTATTCCAAACAATTATTGCCAAT  500

seq1  TCCATGAACAGGAGGTACAATGTTCCAGAGGGGG-CTG-TTAGCT  539
      ||||||||||||||||||| |||||||||||||| ||| ||||||
seq2  TCCATGAACAGGAGGTACATTGTTCCAGAGGGGGCCTGTTTAGCT  545