BAC Information

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BAC

Clone NameB6Ng01-206L12
Chromosome1 (Build37)
Map Location 101,999,309 - 102,133,643
singlet/doubletdoublet
Overlap geneC230078M14Rik, EG666200
Upstream geneLOC633295
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206L12.bB6Ng01-206L12.g
ACCGA026065GA026066
length1,198566
definitionB6Ng01-206L12.b B6Ng01-206L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,132,453 - 102,133,643)(101,999,309 - 101,999,880)
sequence
gaattccaaacattcttttgaacagccatttaggaaaacaaaacaaacaa
aaacacaaacaagctgagggctcaattatatggatgaacacatgtgtact
atttataaaactttataaaaatgtaattaaatgttgtttttaatatgtgt
agaaattaattattctgtagaattcatatatactgaattatttctgtacg
agaattacactacagaaagcatggcctggataactcttctttgatatccc
tgagactgtttgccattatttggaaaagtcttggctcaagacccccaaaa
ccaagtgtggagcccaaaggagatttacataccccaaaggacagaagcca
cggaataagagacaaagacaggagatagaagatggaggagggaaagagaa
caaaggagagtagagaaaatgggtaaaggaaagggatactgagaatttat
tcagggaagggaggggtcagacaatggacttctgaatagagagaagagag
atgtggtacataggaaagtgacagtttataaaggtacaagggaaagaaac
cccatgtacagatgaggtgtttcattttaattgggcatgttaactatatg
agccaaaggaggtttttcattgatggctattagtacattgatagctagac
tttggtagtcaccctcagaaggaggaaatagcccttgggggctagcttca
ggattgtaatctaaccagtttttatccaggtagacagaaaagggtaaggt
tttccagagccatgctcattatcttcaagttggacaaagtcccttcagcc
acatgagaactctgggataggttagaaactgtgtttggagatcagggcct
gaaacaagaatagagatctgtacactgggcatatattccccaccatatcc
aacaaaaagaccagatataagtttttcctggtactacgtaagaaactgag
tcaatcccttttcttccctagcctgaaatgttgtgactctgctgaaaacc
ctagatcttgccgccgctggactcgaccagcaagttagatgctgcaacag
aattccttcttgcacacacggttttatttgggagagccttgaatacagaa
gcaagagaaccccaaggccagaatggtgctgcttaatatagtctaagaaa
gcatgtctcacccggattgttgcactatacctcattgcatgttcctca

ctttagataaaaactctaaaagagctatgaaaaattctaaaagaagtgtt
ttcactctccagagatctccacacagctgatccagataaatactctagca
agaactcttctcttgctagaaacaaatatttaaaataactactggggctg
gagagtgtgattggtgtttaagagcactgtctactcttccagaggtcttg
agttcaattcccagcaaccacatgacagatcaaagccacttgtaatggga
ttaaatgccctcttctggtgtgtctcaagagaaagactgagtactcacat
acataaaacaagtaaatctttaaaaacaaaacaaagcaaagcaaaaaaaa
aaaaaaaaaaacaaaataaaacaaacaattgctatcattttctgctagtt
tgtcaactcatctcctgtagacaaaaagctcagtctttcatttacatatc
aatttagtcatttaccccaagttcctttagggctgtcccataaatcagaa
attcatgccctagcctcttgacacttaagaaataacagtgtgtgtgtgtg
tgtgtgtgtgtgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102132453_102133643
seq2: B6Ng01-206L12.b_42_1239 (reverse)

seq1  TGAGGAACATGCAAATGAGGTATAGTGCATAACCAATCCGGGTGTGAGAC  50
      |||||||||||| |||||||||||||||   | ||||||||  |||||||
seq2  TGAGGAACATGC-AATGAGGTATAGTGC---AACAATCCGG--GTGAGAC  44

seq1  ATGCCTCTCTAGGCCTATA-TAAGCAGCACCAATTCTGGGCTTGGGGTCT  99
      ||| || |||  | ||||| ||||||||||| ||||||| |||||||| |
seq2  ATG-CTTTCTTAGACTATATTAAGCAGCACC-ATTCTGGCCTTGGGGT-T  91

seq1  CT-TTGCCTCTGTAATCAA-GCTCTCCC-AATAAA--CGTGTG---CAGA  141
      || |||| |||||| |||| |||||||| ||||||  ||||||    |||
seq2  CTCTTGCTTCTGTATTCAAGGCTCTCCCAAATAAAACCGTGTGTGCAAGA  141

seq1  AGG-ATTCTGTTGCAGCATCTTACTTGCTGGTCGAGTCCAGCG--CGCAA  188
      ||| ||||||||||||||||| |||||||||||||||||||||   ||||
seq2  AGGAATTCTGTTGCAGCATCTAACTTGCTGGTCGAGTCCAGCGGCGGCAA  191

seq1  GATCTA-GGTTTTCAGCAGAGTCAC-ACATCTCAGGCTAGGGAAGAAAAG  236
      |||||| |||||||||||||||||| |||| |||||||||||||||||||
seq2  GATCTAGGGTTTTCAGCAGAGTCACAACATTTCAGGCTAGGGAAGAAAAG  241

seq1  G--ATGACTCAGTTTCTTACGTAGTACCAGGAAAAACTTATATCTGGTCT  284
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGACTCAGTTTCTTACGTAGTACCAGGAAAAACTTATATCTGGTCT  291

seq1  TTTTG-TGGATATGGTGGGGAATATATGCCCCAGTGTACAGATCTCTATT  333
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTGTTGGATATGGTGGGGAATATATG-CCCAGTGTACAGATCTCTATT  340

seq1  CTTGTTTCAGGCCCTGATCTCCAAACACAGTTTCTAACCTATCCCAGAGT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCAGGCCCTGATCTCCAAACACAGTTTCTAACCTATCCCAGAGT  390

seq1  TCTCATGTGGCTGAAGGGACTTTGTCCAACTTGAAGATAATGAGCATGGC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTGGCTGAAGGGACTTTGTCCAACTTGAAGATAATGAGCATGGC  440

seq1  TCTGGAAAACCTTACCCTTTTCTGTCTACCTGGATAAAAACTGGTTAGAT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAACCTTACCCTTTTCTGTCTACCTGGATAAAAACTGGTTAGAT  490

seq1  TACAATCCTGAAGCTAGCCCCCAAGGGCTATTTCCTCCTTCTGAGGGTGA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCCTGAAGCTAGCCCCCAAGGGCTATTTCCTCCTTCTGAGGGTGA  540

seq1  CTACCAAAGTCTAGCTATCAATGTACTAATAGCCATCAATGAAAAACCTC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAAGTCTAGCTATCAATGTACTAATAGCCATCAATGAAAAACCTC  590

seq1  CTTTGGCTCATATAGTTAACATGCCCAATTAAAATGAAACACCTCATCTG  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTCATATAGTTAACATGCCCAATTAAAATGAAACACCTCATCTG  640

seq1  TACATGGGGTTTCTTTCCCTTGTACCTTTATAAACTGTCACTTTCCTATG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGGGTTTCTTTCCCTTGTACCTTTATAAACTGTCACTTTCCTATG  690

seq1  TACCACATCTCTCTTCTCTCTATTCAGAAGTCCATTGTCTGACCCCTCCC  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATCTCTCTTCTCTCTATTCAGAAGTCCATTGTCTGACCCCTCCC  740

seq1  TTCCCTGAATAAATTCTCAGTATCCCTTTCCTTTACCCATTTTCTCTACT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGAATAAATTCTCAGTATCCCTTTCCTTTACCCATTTTCTCTACT  790

seq1  CTCCTTTGTTCTCTTTCCCTCCTCCATCTTCTATCTCCTGTCTTTGTCTC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTTCTCTTTCCCTCCTCCATCTTCTATCTCCTGTCTTTGTCTC  840

seq1  TTATTCCGTGGCTTCTGTCCTTTGGGGTATGTAAATCTCCTTTGGGCTCC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCGTGGCTTCTGTCCTTTGGGGTATGTAAATCTCCTTTGGGCTCC  890

seq1  ACACTTGGTTTTGGGGGTCTTGAGCCAAGACTTTTCCAAATAATGGCAAA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGGTTTTGGGGGTCTTGAGCCAAGACTTTTCCAAATAATGGCAAA  940

seq1  CAGTCTCAGGGATATCAAAGAAGAGTTATCCAGGCCATGCTTTCTGTAGT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCAGGGATATCAAAGAAGAGTTATCCAGGCCATGCTTTCTGTAGT  990

seq1  GTAATTCTCGTACAGAAATAATTCAGTATATATGAATTCTACAGAATAAT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTCGTACAGAAATAATTCAGTATATATGAATTCTACAGAATAAT  1040

seq1  TAATTTCTACACATATTAAAAACAACATTTAATTACATTTTTATAAAGTT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTACACATATTAAAAACAACATTTAATTACATTTTTATAAAGTT  1090

seq1  TTATAAATAGTACACATGTGTTCATCCATATAATTGAGCCCTCAGCTTGT  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAGTACACATGTGTTCATCCATATAATTGAGCCCTCAGCTTGT  1140

seq1  TTGTGTTTTTGTTTGTTTTGTTTTCCTAAATGGCTGTTCAAAAGAATGTT  1183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTTGTTTGTTTTGTTTTCCTAAATGGCTGTTCAAAAGAATGTT  1190

seq1  TGGAATTC  1191
      ||||||||
seq2  TGGAATTC  1198


seq1: chr1_101999309_101999880
seq2: B6Ng01-206L12.g_65_636

seq1  GAATTCCTTTAGATAAAAACTCTAAAAGAGCTATGAAAAATTCTAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAGATAAAAACTCTAAAAGAGCTATGAAAAATTCTAAAAGA  50

seq1  AGTGTTTTCACTCTCCAGAGATCTCCACACAGCTGATCCAGATAAATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCACTCTCCAGAGATCTCCACACAGCTGATCCAGATAAATACT  100

seq1  CTAGCAAGAACTCTTCTCTTGCTAGAAACAAATATTTAAAATAACTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAGAACTCTTCTCTTGCTAGAAACAAATATTTAAAATAACTACTG  150

seq1  GGGCTGGAGAGTGTGATTGGTGTTTAAGAGCACTGTCTACTCTTCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAGAGTGTGATTGGTGTTTAAGAGCACTGTCTACTCTTCCAGAG  200

seq1  GTCTTGAGTTCAATTCCCAGCAACCACATGACAGATCAAAGCCACTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGTTCAATTCCCAGCAACCACATGACAGATCAAAGCCACTTGTA  250

seq1  ATGGGATTAAATGCCCTCTTCTGGTGTGTCTCAAGAGAAAGACTGAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTAAATGCCCTCTTCTGGTGTGTCTCAAGAGAAAGACTGAGTAC  300

seq1  TCACATACATAAAACAAGTAAATCTTTAAAAACAAAACAAAGCAAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATAAAACAAGTAAATCTTTAAAAACAAAACAAAGCAAAGCAA  350

seq1  AAAAAAAAAAAAAAAAACAAAATAAAACAAACAATTGCTATCATTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAACAAAATAAAACAAACAATTGCTATCATTTTCTG  400

seq1  CTAGTTTGTCAACTCATCTCCTGTAGACAAAAAGCTCAGTCTTTCATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTGTCAACTCATCTCCTGTAGACAAAAAGCTCAGTCTTTCATTTA  450

seq1  CATATCAATTTAGTCATTTACCCCAAGTTCCTTTAGGGCTGTCCCATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAATTTAGTCATTTACCCCAAGTTCCTTTAGGGCTGTCCCATAAA  500

seq1  TCAGAAATTCATGCCCTAGCCTCTTGACACTTAAGAAATAACAGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTCATGCCCTAGCCTCTTGACACTTAAGAAATAACAGTGTGTG  550

seq1  TGTGTGTGTGTGTGTGTGTGTA  572
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTA  572


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