BAC Information

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BAC

Clone NameB6Ng01-207B24
Chromosome1 (Build37)
Map Location 146,413,480 - 146,498,634
singlet/doubletdoublet
Overlap genenone
Upstream geneCdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456, Rgs21
Downstream geneRgs18, LOC667877, LOC625057, LOC383570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207B24.bB6Ng01-207B24.g
ACCGA026361GA026362
length1,1151,111
definitionB6Ng01-207B24.b B6Ng01-207B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,497,505 - 146,498,634)(146,413,480 - 146,414,588)
sequence
gaattcatgatagtaaaatgctattgaactaatttgtggctagcttcgtg
gaaaataattcaatttcttttccaggctttttcactgagatataagcttt
tatagtcccggttaaatgggcaattcatttcataatcccacaatctaagt
gtaattgattgagcaaaagctacaaccctgacacaaaattagttactcat
aatcttttttttttctaaatttctaaaaaggatataactgctttgggttg
attaaattggacctaaatcaattttcctcctacacaaattctatcaggaa
ttgagatacatgaatacagtgcatgaaaagacatgcaagaatgttggatt
ccaaactaccagaaatatcccaagctaaatgtgttgcttttgaaggaaca
catttttcttgtggatctttttccttgacctataaatggcaatgtacagt
agaacactgtccaaaaatcagtgattgtgagtgatgaaaattattgaaac
accttgaagtgttgtatttgaagccatacacagaatgcttgagaaggaaa
tatttggtgttataagccactggtagttttgatttattactataacaatt
atgtatgtagtatacaaagcaatatacaatgacatgttgactagtttcca
gtttggcaaggatatagtcgtacaaaataagtaaaagaatctatcttaca
gagcgaaagataccaaagtactttatataaggcacacaaatagacagata
aaggaaagataacttgacatgacaaagtggttcactaagtgcataactgt
acaagtagttaatatttcactatgacacgaaaataggaaatatgagcatt
aaaaaggtaaatataggggctgttgacctggctcagccagttaaagcaca
cgtgagtccccaaaatttgttcacagaagctatgtaaaattctgatgtaa
aggcacacatctgtactctcagcactcaaatactgagatagggagcaaga
gatagaaagatttcctgtgacatagcagctagcaagcaaatgaaatatat
agagtgaggatagtgaggcgagccaagaagaagaaagactttatcactgc
ttaccacgaatagtc
gaattctttggctgcttgatttagtttcaagtcatatggacaatggtagt
atctcctaagtacatctgaaggcataattgttatttctaggattattgaa
tatatttcttataaaataatacagtaccttaatattttctattggtttct
taaaaacagaccttaaatggtagagctattaatacttattattttaggat
acaacaaatattagaaaaggatccaatgaactgtcagaattttgacatat
gatacaaactttgaacatgtaatgtgtgcacataaatactaatgtagcta
gctcatggaagaagagagacaaagatacaggaaccatttcattttgagcc
aggaatgcacttattgattatcagaatcttattaagctgagaattaaacc
tatatggactaatttttttaaaaaaacctaaagctcccattgtattttaa
attttattttgtgtgaaataaagacagttttaagccttaaagataaaatc
gaaaaagactggtgaaaagaataagctatatgtatccattttagcagtac
tatgattgccatcttaagttttgtccaaatcaggtgaattgcaaaaaaac
tatattaaatatgtactacatcctatatttaaccccatcttcacattaaa
aataacttattattttgggatttggtaattatttcctatgggctcggtgg
ttctgcatcttgtctcttctttcctcctgtggagtctgatattattctct
gttcaattttccttttcaaatttgaatcaaactatttggcagagtgtcag
tgctctgacaatctgtgacaatatattattttgtgtgaatgttagcaaat
gattagctagtaaaaagtttttcattttatgattctcagcttgctgagtt
tgatgaatacgatctaatatctggaattttttatgttcaaatgtcatcag
ttccctctttgtagtagattcttttttttttttaaataacaagtgtaaat
gactttatacctcacaccaatgtgatgcagaggagccactttctgttcca
ttgaatgtgctcttgctctcggggccttgatggcaagatcagcttctata
tgtgtttgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_146497505_146498634
seq2: B6Ng01-207B24.b_32_1146 (reverse)

seq1  GACTATTTTGTGGTAAGCATTTGATAAAAGTCTTTTTCTTCCTCCTCTGC  50
      ||||| || ||||||||||  |||| ||||||  |||||| || ||  ||
seq2  GACTA-TTCGTGGTAAGCA-GTGAT-AAAGTC--TTTCTT-CTTCTTGGC  44

seq1  TCACCCCTCACCTATCCTTCACTCTATATATTTCATTTGCTTGCTAGCTG  100
      |  | ||||| |||||| ||||||||||||||||||||||||||||||||
seq2  T--CGCCTCA-CTATCC-TCACTCTATATATTTCATTTGCTTGCTAGCTG  90

seq1  GCCTATGTTCTTCCAGGAAATC-TTCTATCTC-TGCCTCCTATCTCAGTA  148
        |||||   |  ||||||||| ||||||||| |||  ||||||||||||
seq2  --CTATG---TCACAGGAAATCTTTCTATCTCTTGCTCCCTATCTCAGTA  135

seq1  TTTGAGTGCTGAGAGTACAGATGTGTGCCTTTACATCAGAATTTTTACAT  198
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTGAGTGCTGAGAGTACAGATGTGTGCCTTTACATCAGAA-TTTTACAT  184

seq1  AGCTTCTGTGAAACAAATTTTGGGGACTCACGTGTGCTTTAACTGGCTGA  248
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGTG-AACAAATTTTGGGGACTCACGTGTGCTTTAACTGGCTGA  233

seq1  GCCAGGTCAACAGCCCCTATATTTACCTTTTTAATGCTCATATTTCCTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTCAACAGCCCCTATATTTACCTTTTTAATGCTCATATTTCCTAT  283

seq1  TTTCGTGTCATAGTGAAATATTAACTACTTGTACAGTTATGCACTTAGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTGTCATAGTGAAATATTAACTACTTGTACAGTTATGCACTTAGTG  333

seq1  AACCACTTTGTCATGTCAAGTTATCTTTCCTTTATCTGTCTATTTGTGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTTGTCATGTCAAGTTATCTTTCCTTTATCTGTCTATTTGTGTG  383

seq1  CCTTATATAAAGTACTTTGGTATCTTTCGCTCTGTAAGATAGATTCTTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATATAAAGTACTTTGGTATCTTTCGCTCTGTAAGATAGATTCTTTT  433

seq1  ACTTATTTTGTACGACTATATCCTTGCCAAACTGGAAACTAGTCAACATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTTGTACGACTATATCCTTGCCAAACTGGAAACTAGTCAACATG  483

seq1  TCATTGTATATTGCTTTGTATACTACATACATAATTGTTATAGTAATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTATATTGCTTTGTATACTACATACATAATTGTTATAGTAATAAA  533

seq1  TCAAAACTACCAGTGGCTTATAACACCAAATATTTCCTTCTCAAGCATTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTACCAGTGGCTTATAACACCAAATATTTCCTTCTCAAGCATTC  583

seq1  TGTGTATGGCTTCAAATACAACACTTCAAGGTGTTTCAATAATTTTCATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGGCTTCAAATACAACACTTCAAGGTGTTTCAATAATTTTCATC  633

seq1  ACTCACAATCACTGATTTTTGGACAGTGTTCTACTGTACATTGCCATTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAATCACTGATTTTTGGACAGTGTTCTACTGTACATTGCCATTTA  683

seq1  TAGGTCAAGGAAAAAGATCCACAAGAAAAATGTGTTCCTTCAAAAGCAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCAAGGAAAAAGATCCACAAGAAAAATGTGTTCCTTCAAAAGCAAC  733

seq1  ACATTTAGCTTGGGATATTTCTGGTAGTTTGGAATCCAACATTCTTGCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGCTTGGGATATTTCTGGTAGTTTGGAATCCAACATTCTTGCAT  783

seq1  GTCTTTTCATGCACTGTATTCATGTATCTCAATTCCTGATAGAATTTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCATGCACTGTATTCATGTATCTCAATTCCTGATAGAATTTGTG  833

seq1  TAGGAGGAAAATTGATTTAGGTCCAATTTAATCAACCCAAAGCAGTTATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGAAAATTGATTTAGGTCCAATTTAATCAACCCAAAGCAGTTATA  883

seq1  TCCTTTTTAGAAATTTAGAAAAAAAAAAGATTATGAGTAACTAATTTTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAGAAATTTAGAAAAAAAAAAGATTATGAGTAACTAATTTTGT  933

seq1  GTCAGGGTTGTAGCTTTTGCTCAATCAATTACACTTAGATTGTGGGATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGTTGTAGCTTTTGCTCAATCAATTACACTTAGATTGTGGGATTA  983

seq1  TGAAATGAATTGCCCATTTAACCGGGACTATAAAAGCTTATATCTCAGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAATTGCCCATTTAACCGGGACTATAAAAGCTTATATCTCAGTG  1033

seq1  AAAAAGCCTGGAAAAGAAATTGAATTATTTTCCACGAAGCTAGCCACAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCTGGAAAAGAAATTGAATTATTTTCCACGAAGCTAGCCACAAA  1083

seq1  TTAGTTCAATAGCATTTTACTATCATGAATTC  1130
      ||||||||||||||||||||||||||||||||
seq2  TTAGTTCAATAGCATTTTACTATCATGAATTC  1115

seq1: chr1_146413480_146414588
seq2: B6Ng01-207B24.g_62_1172

seq1  GAATTCTTTGGCTGCTTGATTTAGTTTCAAGTCATATGGACAATGGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCTGCTTGATTTAGTTTCAAGTCATATGGACAATGGTAGT  50

seq1  ATCTCCTAAGTACATCTGAAGGCATAATTGTTATTTCTAGGATTATTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTAAGTACATCTGAAGGCATAATTGTTATTTCTAGGATTATTGAA  100

seq1  TATATTTCTTATAAAATAATACAGTACCTTAATATTTTCTATTGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTTATAAAATAATACAGTACCTTAATATTTTCTATTGGTTTCT  150

seq1  TAAAAACAGACCTTAAATGGTAGAGCTATTAATACTTATTATTTTAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAGACCTTAAATGGTAGAGCTATTAATACTTATTATTTTAGGAT  200

seq1  ACAACAAATATTAGAAAAGGATCCAATGAACTGTCAGAATTTTGACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAATATTAGAAAAGGATCCAATGAACTGTCAGAATTTTGACATAT  250

seq1  GATACAAACTTTGAACATGTAATGTGTGCACATAAATACTAATGTAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAACTTTGAACATGTAATGTGTGCACATAAATACTAATGTAGCTA  300

seq1  GCTCATGGAAGAAGAGAGACAAAGATACAGGAACCATTTCATTTTGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGGAAGAAGAGAGACAAAGATACAGGAACCATTTCATTTTGAGCC  350

seq1  AGGAATGCACTTATTGATTATCAGAATCTTATTAAGCTGAGAATTAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCACTTATTGATTATCAGAATCTTATTAAGCTGAGAATTAAACC  400

seq1  TATATGGACTAATTTTTTTAAAAAAACCTAAAGCTCCCATTGTATTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGACTAATTTTTTTAAAAAAACCTAAAGCTCCCATTGTATTTTAA  450

seq1  ATTTTATTTTGTGTGAAATAAAGACAGTTTTAAGCCTTAAAGATAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTGTGTGAAATAAAGACAGTTTTAAGCCTTAAAGATAAAATC  500

seq1  GAAAAAGACTGGTGAAAAGAATAAGCTATATGTATCCATTTTAGCAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGACTGGTGAAAAGAATAAGCTATATGTATCCATTTTAGCAGTAC  550

seq1  TATGATTGCCATCTTAAGTTTTGTCCAAATCAGGTGAATTGCAAAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTGCCATCTTAAGTTTTGTCCAAATCAGGTGAATTGCAAAAAAAC  600

seq1  TATATTAAATATGTACTACATCCTATATTTAACCCCATCTTCACATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAATATGTACTACATCCTATATTTAACCCCATCTTCACATTAAA  650

seq1  AATAACTTATTATTTTGGGATTTGGTAATTATTTCCTATGGGCTCGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTATTATTTTGGGATTTGGTAATTATTTCCTATGGGCTCGGTGG  700

seq1  TTCTGCATCTTGTCTCTTCTTTCCTCCTGTGGAGTCTGATATTATTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATCTTGTCTCTTCTTTCCTCCTGTGGAGTCTGATATTATTCTCT  750

seq1  GTTCAATTTTCCTTTTCAAATTTGAATCAAACTATTTGGCAGAGTGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTTTCCTTTTCAAATTTGAATCAAACTATTTGGCAGAGTGTCAG  800

seq1  TGCTCTGACAATCTGTGACAATATATTATTTTGTGTGAATGTTAGCAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGACAATCTGTGACAATATATTATTTTGTGTGAATGTTAGCAAAT  850

seq1  GATTAGCTAGTAAAAAGTTTTTCATTTTATGATTCTCAGCTTGCTGAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCTAGTAAAAAGTTTTTCATTTTATGATTCTCAGCTTGCTGAGTT  900

seq1  TGATGAATACGATCTAATATCTGGAA-TTTTTATGTTCAAATGTCATCAG  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGATGAATACGATCTAATATCTGGAATTTTTTATGTTCAAATGTCATCAG  950

seq1  TTCCCTCTTTGTAGTAGATTC--TTTTTTTTTTAAATAACAAAGTGTAAA  997
      |||||||||||||||||||||  ||||||||||||||||| |||||||||
seq2  TTCCCTCTTTGTAGTAGATTCTTTTTTTTTTTTAAATAAC-AAGTGTAAA  999

seq1  TGACTTTATA-CTCACACAAATGTGATGCAGAGGAAGCCACTTCTTGTTC  1046
      |||||||||| ||||||| ||||||||||||||| ||||||||  |||||
seq2  TGACTTTATACCTCACACCAATGTGATGCAGAGG-AGCCACTTTCTGTTC  1048

seq1  CCTTG-ATGTGCTCTTTGCTCTCGGGGC--TGATGCGAGGATCCTGCTTC  1093
      | ||| |||||||| |||||||||||||  |||||  | ||| | |||||
seq2  CATTGAATGTGCTC-TTGCTCTCGGGGCCTTGATGGCAAGAT-CAGCTTC  1096

seq1  TATAATGTGTTTGTCT  1109
      ||| ||||||||||||
seq2  TAT-ATGTGTTTGTCT  1111