BAC Information

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BAC

Clone NameB6Ng01-207G08
Chromosome17 (Build37)1 (Build37)
Map Location 51,724,151 - 51,724,243149,441,935 - 149,442,491
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePlcl2, EG654432, Tbc1d5, LOC100043451, LOC100043452
Downstream geneSatb1, EG628919, LOC672987, EG328839
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207G08.bB6Ng01-207G08.g
ACCGA026558GA026559
length116847
definitionB6Ng01-207G08.b B6Ng01-207G08.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,724,151 - 51,724,243)(149,441,935 - 149,442,491)
sequence
gaattccaagacagctaggactacaaaaaaacctcccttcagaaagaaag
ggagagagagagagatgagagagagagagagagagagagagagatgagag
agagatgagagagaga
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atctatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtattagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggtttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttaaat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctagcttagggtttatct
atcttgtgattttctcaaagaaccaactccttgtttggttaattctttga
aagttcttcttgtttacacttggttgattttcactcctgattttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_51724151_51724243
seq2: B6Ng01-207G08.b_75_153 (reverse)

seq1  TCTCTCTCTCTTTTTAGGATTTTAAAATCAATCTCTC-TCTCTCTCTCTC  49
      ||||||||||                |||  |||||| ||||||||||||
seq2  TCTCTCTCTC----------------ATCTCTCTCTCATCTCTCTCTCTC  34

seq1  TCTCTCTCTCTCTCTC-TCTCTCTCTCTCTCTCTCCCTCTCTGAA  93
      |||||||||||||||| |||||||||||||| ||  || ||||||
seq2  TCTCTCTCTCTCTCTCATCTCTCTCTCTCTCCCTTTCTTTCTGAA  79

seq1: chr1_149441935_149442491
seq2: B6Ng01-207G08.g_355_911 (reverse)

seq1  ATCAAACTCAGGGGTGAAAA-CAACCAAGTGGAAACAAGAAGAACTATTC  49
      |||||| ||||| ||||||| |||||||||| |||||||||||||| |||
seq2  ATCAAAATCAGGAGTGAAAATCAACCAAGTGTAAACAAGAAGAACT-TTC  49

seq1  AAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATA  99
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  AAAGAATTAACCAAACAAGGAGTTGGTTCTTTGAGAAAATC-ACAAGATA  98

seq1  GATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAAT  149
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  GATAAACCCTAAGCTAGACTCACTAGAGGGCACAGGGACAAAATCCTAAT  148

seq1  TAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAA  198

seq1  TCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTG  249
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTG  248

seq1  G-AAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAA  298
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAA  298

seq1  AGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAA  348
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCCCCTAAA  348

seq1  GAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACC  398
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACC  398

seq1  AGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTC  448
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTC  448

seq1  CAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTATTCTACCC  498
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCC  498

seq1  AACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGA  548
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACTCATTTTATGAAGCCACTATTACTCTAATACCTAAACCACAGAAAGA  548

seq1  TCCAACAAA  557
      |||||||||
seq2  TCCAACAAA  557