BAC Information

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BAC

Clone NameB6Ng01-207H05
Chromosome1 (Build37)
Map Location 136,371,472 - 136,500,756
singlet/doubletdoublet
Overlap geneKlhl12, Rabif, 4931440L10Rik, Jarid1b
Upstream geneLOC667371, Snrpe, Zc3h11a, LOC667118, Lax1, Atp2b4, Optc, Prelp, LOC100042352, LOC100042358, Fmod, Btg2, EG667414, Chit1, Chi3l1, Mybph, Adora1, Myog, Ppfia4, LOC100042382, Tmem183a, 4933406M09Rik, Cyb5r1, Adipor1
Downstream geneLOC100042418, Syt2, Ppp1r12b, Ube2t, Lgr6, Ptprv, LOC100042432, Ptpn7, Arl8a, Gpr37l1, LOC100043064, Elf3, Rnpep, Timm17a, Lmod1, Tmem58, Ipo9, Nav1, EG215714
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207H05.bB6Ng01-207H05.g
ACCGA026598GA026599
length584929
definitionB6Ng01-207H05.b B6Ng01-207H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,500,168 - 136,500,756)(136,371,472 - 136,372,394)
sequence
catgtaagttgtctacagaactccttcaaaataaaatgaagggcttagcc
ttcctcttctagagctgggtatgagcgagcgtgtggctgttccgtgtgtg
aggactgatcaagctgcacacgtgtatacacttctctatatggatgtaag
gcttaaaatgaacaccacagacatatacaaagtaaatatgactgtccaaa
accagacagaatcgtgtgggttcaggaagccagctgcatgaaaagcagga
cacttacaattatgaaaattaaataaggccttgactgatcttttttaaaa
gaggtcaaacttgaaacctgaaagggcagcagtggctttgcctcaccacc
tcagtaaagagcatgaccaggactaagggtttttattttttttaatgatt
tatctattttatttttattatatataagtacactgtagctgtcttcagac
acaccagaagagggcgtcagatcttgttacagatggttgtgagccaccat
gtggttgctgggatttgaactcaggaacttcggaagagcagtcggtgctc
ttaaccgtttgagccatctcactagcccggacta
gaattcatcccagctaggagtcatatagagaccttactggtgcggtttat
agggaccgttttttctgaactagagagcaaagtacagagtggaggtagat
gctaatacaaagatctatttcctgtgtaggtgtatgtgtatatgtgcaca
tgtatgccagaggtcaatcttcggtgctgttcctcagaccatccagcttg
gttttttaaatacagactgattgattggcccagagtttctgattgagctg
gggcattacaagtataggctaccatgtctagctttttatgtggtttcgtg
tgacaggacttgggtcatcatgcttacatggcaaggtctttaccaaagtg
agccatctagagcaccagtgggaatagatgtgggagttggactaatggtg
aatacatgcctataactcggcacttggaagatagtgcagaaacatcagac
attgaaagttatcctatgccctgttgtaagtttgagaccaacctgggcta
caggagaacctgtcagaaagaaaggatgaaaaggaggaagaggagaacaa
aggagggaaggagagagagagctttgggggaattatttcaaagaagacat
ttttccaagagagattgtgtgccttgtctttttgagacagtgtctctctt
tagatcatcctggctagaagtcagtctgtagctctgagttggctttgaag
tctcagaaatccttttatctcagcctgccaagtaactagagttgcagatg
tgaagccagtgtgctcagctcccttaagattcgtactaatccttacctgc
ttttaatctacatacataaaattgcttctttatatacctcattttgttat
tgcagtatttagaaatggccggttcccttctctcttctgtcttttagcct
ttcattccgctggaagtttacaatgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_136500168_136500756
seq2: B6Ng01-207H05.b_32_621 (reverse)

seq1  TAGTCCGGGCTGGTGAGATGGCTC-AGCGGTTAAGAGCACCGACTGCTCT  49
      ||||||||||| |||||||||||| | |||||||||||||||||||||||
seq2  TAGTCCGGGCTAGTGAGATGGCTCAAACGGTTAAGAGCACCGACTGCTCT  50

seq1  TCCGAAGTTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAAGTTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC  100

seq1  ATCTGTAACAAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAACAAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC  150

seq1  AGTGTACTTATATATAATAAAAATAAAATAGATAAATCATTAAAAAAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTATATATAATAAAAATAAAATAGATAAATCATTAAAAAAAAT  200

seq1  AAAAACCCTTAGTCCTGGTCATGCTCTTTACTGAGGTGGTGAGGCAAAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCTTAGTCCTGGTCATGCTCTTTACTGAGGTGGTGAGGCAAAGC  250

seq1  CACTGCTGCCCTTTCAGGTTTCAAGTTTGACCTCTTTTAAAAAAGATCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGCCCTTTCAGGTTTCAAGTTTGACCTCTTTTAAAAAAGATCAG  300

seq1  TCAAGGCCTTATTTAATTTTCATAATTGTAAGTGTCCTGCTTTTCATGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCTTATTTAATTTTCATAATTGTAAGTGTCCTGCTTTTCATGCA  350

seq1  GCTGGCTTCCTGAACCCACACGATTCTGTCTGGTTTTGGACAGTCATATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTCCTGAACCCACACGATTCTGTCTGGTTTTGGACAGTCATATT  400

seq1  TACTTTGTATATGTCTGTGGTGTTCATTTTAAGCCTTACATCCATATAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTATATGTCTGTGGTGTTCATTTTAAGCCTTACATCCATATAGA  450

seq1  GAAGTGTATACACGTGTGCAGCTTGATCAGTCCTCACACACGGAACAGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTATACACGTGTGCAGCTTGATCAGTCCTCACACACGGAACAGCC  500

seq1  ACACGCTCGCTCATACCCAGCTCTAGAAGAGGAAGGCTAAGCCCTTCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCTCGCTCATACCCAGCTCTAGAAGAGGAAGGCTAAGCCCTTCATT  550

seq1  TTATTTTGAAGGAGTTCTGTAGACAACTTACATGGAATTC  589
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAAGGAGTTCTGTAGACAACTTACATGGAATTC  590

seq1: chr1_136371472_136372394
seq2: B6Ng01-207H05.g_67_995

seq1  GAATTCATCCCAGCTAGGAGTCATATAGAGACCTTACTGGTGCGGTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCAGCTAGGAGTCATATAGAGACCTTACTGGTGCGGTTTAT  50

seq1  AGGGACCGTTTTTTCTGAACTAGAGAGCAAAGTACAGAGTGGAGGTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCGTTTTTTCTGAACTAGAGAGCAAAGTACAGAGTGGAGGTAGAT  100

seq1  GCTAATACAAAGATCTATTTCCTGTGTAGGTGTATGTGTATATGTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATACAAAGATCTATTTCCTGTGTAGGTGTATGTGTATATGTGCACA  150

seq1  TGTATGCCAGAGGTCAATCTTCGGTGCTGTTCCTCAGACCATCCAGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCAGAGGTCAATCTTCGGTGCTGTTCCTCAGACCATCCAGCTTG  200

seq1  GTTTTTTAAATACAGACTGATTGATTGGCCCAGAGTTTCTGATTGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTAAATACAGACTGATTGATTGGCCCAGAGTTTCTGATTGAGCTG  250

seq1  GGGCATTACAAGTATAGGCTACCATGTCTAGCTTTTTATGTGGTTTCGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTACAAGTATAGGCTACCATGTCTAGCTTTTTATGTGGTTTCGTG  300

seq1  TGACAGGACTTGGGTCATCATGCTTACATGGCAAGGTCTTTACCAAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGACTTGGGTCATCATGCTTACATGGCAAGGTCTTTACCAAAGTG  350

seq1  AGCCATCTAGAGCACCAGTGGGAATAGATGTGGGAGTTGGACTAATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTAGAGCACCAGTGGGAATAGATGTGGGAGTTGGACTAATGGTG  400

seq1  AATACATGCCTATAACTCGGCACTTGGAAGATAGTGCAGAAACATCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGCCTATAACTCGGCACTTGGAAGATAGTGCAGAAACATCAGAC  450

seq1  ATTGAAAGTTATCCTATGCCCTGTTGTAAGTTTGAGACCAACCTGGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTTATCCTATGCCCTGTTGTAAGTTTGAGACCAACCTGGGCTA  500

seq1  CAGGAGAACCTGTCAGAAAGAAAGGATGAAAAGGAGGAAGAGGAGAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAACCTGTCAGAAAGAAAGGATGAAAAGGAGGAAGAGGAGAACAA  550

seq1  AGGAGGGAAGGAGAGAGAGAGCTTTGGGGGAATTATTTCAAAGAAGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGAAGGAGAGAGAGAGCTTTGGGGGAATTATTTCAAAGAAGACAT  600

seq1  TTTTCCAAGAGAGATTGTGTGCCTTGTCTTTTTGAGACAGTGTCTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGAGAGATTGTGTGCCTTGTCTTTTTGAGACAGTGTCTCTCTT  650

seq1  TAGATCATCCTGGCTAGAAGTCAGTCTGTAGCTCTGAGTTGGC-TTGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGATCATCCTGGCTAGAAGTCAGTCTGTAGCTCTGAGTTGGCTTTGAAG  700

seq1  TCTCAGAAATCCTTTTATCTCAGCCTGCCAAGTAACTAGAGTTGCAGATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAATCCTTTTATCTCAGCCTGCCAAGTAACTAGAGTTGCAGATG  750

seq1  TGAAGCCAGTGTGCTCAGCTCCCTTAAGATTCGTACTAATCCTTACCTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAGTGTGCTCAGCTCCCTTAAGATTCGTACTAATCCTTACCTGC  800

seq1  TTTT-ATCTACATACAT-AAATTGCTTCTTTATATACCTCATTTTGTTAT  847
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTAATCTACATACATAAAATTGCTTCTTTATATACCTCATTTTGTTAT  850

seq1  TGCAGTA-TTAGAAATGGCCGGTTCCCTTCTCTCTTCTGTCTTTTAGCCT  896
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATTTAGAAATGGCCGGTTCCCTTCTCTCTTCTGTCTTTTAGCCT  900

seq1  TTCA-TCCGCT-GTAGTTTACAATGCAGA  923
      |||| |||||| | |||||||||||||||
seq2  TTCATTCCGCTGGAAGTTTACAATGCAGA  929