BAC Information

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BAC

Clone NameB6Ng01-207M14
Chromosome1 (Build37)
Map Location 48,554,190 - 48,554,721
singlet/doubletsinglet
Overlap geneLOC674566
Upstream geneLOC666869, LOC546734
Downstream geneLOC100041936, LOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207M14.bB6Ng01-207M14.g
ACCGA026841GA026842
length1,1981,167
definitionB6Ng01-207M14.b B6Ng01-207M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacccaatggctgagaagcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgataatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgccagt
agatgctggcgaggatgtggagaaagaagaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacataatacgaccagaagatccagcaatacttctcctgggc
atatacccagaagaagttccaactggtaataagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
ctccctcaacagaagaatggatacagaaaatgtggtacattgacacaatg
gagtactactcagctattaaaaacaatggatttatgaaattcttggacaa
atggatgcatctggaggatatcatccttagtgaggtaacccaatcacaaa
agaagtcattagatatgcactcagtaataagtggatattaacatagaaca
cccaagatacaatttgcaaaacacaagaaaatcaagaagagggaagacca
atgggtggatacttcattcctccttagaatagggaacaaaatacccatga
aaggagttacagagacaaaatttggagctaagacgaaagaaaggatggat
tatccagagactaccccacccggggatttatcccataatcagccaccaaa
tctagacattattgcatatgccagcatgattttgctgaaagggaccctgg
tttagctgtctcatatgaggttatgccagtgcctggcaaatacagaaagt
ggatgctcacagtcatctataagatggaacacagggcccccaaaggagaa
gctagagaaagcacccaaggagctgaaggggtctgcaacctataggtgga
acacaatatgaactaaccagtacccccagaagctcattatctctggcgta
tgtagcataagatgctagtcagccattccactggggaagagagcccttgt
atgccaactttataatgcccagtacagagatggcagtcaagagtcagatg
gcgtgtaggggaccagtgagtgtgcggtaggctacgcattatgcggct
gaattcctgatttttccagaacttttatcatgaatgggtgttggatcttg
acaaatggtttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttcgtatattaaacca
tcactgcatccctggaataaacctacttggtcaggatggatgattgcttt
aatgtgttcttggattcggttagcgagaattttattgaggatttttgcat
cgatattcataagagaaattggtctgaaattctctatctttgttgggtct
ttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttggg
tagagtaccttctacttctattttgtgaaatagtttgtgcagaactggaa
ttagatcttctttgaaggtctgatagaactctgcactaaacccatctggt
cctgggctttttttggatgggagactattaataactgcttctatttcttt
aggtgatatgggactgtttagatggtcaacttgatcctgattcaactttg
gtacctggtatctgtccagaaatttgtccatttcgtcctggttttccagt
tttgttgagtatagccttttgtagaaggatctgatggtgttttggatttc
ttcaggatctgttgttatttctcccttttcatttctgattttgttaatta
agatgctttctctgtgccctgtagtgattctggctaagggtttaatctat
cttattgacgttttcaaagaaccagctcctcatttggttgattctttgaa
tagttcttgtttccacttggtttatttcacccctgagtttgattatttcc
tgcagtctactcctctttgggtgaatttgcttccttttttctagagcttt
tagatgtgttgtcaagctgctagtatgtgctctcctcccgtttcttcttg
gaggcaactcagagctatgagtttccctctagaaatgctttcattgtgtc
ccaataagtttgggtacgttggtgggctcaatttccattaaacttctcaa
aagtctttatttctttctttaatcttctgacgatgtatcaattgagaaga
gtgtgtttagtttcttcaggaagtttgctcataatatgttgttattgaga
tcagcctgaagccatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_48554190_48554721
seq2: B6Ng01-207M14.g_711_1234 (reverse)

seq1  CCATGGCCTAAGACTGATCTCAATAACAACATAAATAATGGAAAGCCAAC  50
      ||||||| | || |||||||||||||||||||  || |||   ||| |||
seq2  CCATGGCTTCAGGCTGATCTCAATAACAACAT--ATTATG---AGCAAAC  45

seq1  ATTCACGTGGAAACTGAATAACACTCTTCTCAA-TGATACCTTGGTCAAG  99
       |||  |  |||||| ||  ||||||||||||| ||||| | | ||||  
seq2  -TTCCTGAAGAAACT-AAACACACTCTTCTCAATTGATA-CATCGTCA--  90

seq1  GAAGGAATAAAGAAAGAAATTAAAGACTTTTTAG-AGTTTAATGAAAATG  148
      ||| || |||||||||||| ||||||||||| || ||||||||| |||| 
seq2  GAA-GATTAAAGAAAGAAA-TAAAGACTTTTGAGAAGTTTAATGGAAATT  138

seq1  AAGCC--ACAACGTACCCAAACCTA-TGGGACACAATGAAAGCATTTCTA  195
       ||||   |||||||||||||| || ||||||||||||||||||||||| 
seq2  GAGCCCACCAACGTACCCAAACTTATTGGGACACAATGAAAGCATTTCT-  187

seq1  AGAGGGAAACTCATAGCTCTGAG-TGCCTCCAAGAAGAAACGGGA-GACA  243
      ||||||||||||||||||||||| ||||||||||||||||||||| || |
seq2  AGAGGGAAACTCATAGCTCTGAGTTGCCTCCAAGAAGAAACGGGAGGAGA  237

seq1  GCACATACTAGCAGCTTGACAACACATCTAAAAGCCCTAGAAAAAAAGGA  293
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  GCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAG-AAAAAAGGA  286

seq1  AGCAAATTCACCC-AAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGG  342
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  AGCAAATTCACCCAAAGAGGAGTAGACTGCAGGAAATAATCAAACTCAGG  336

seq1  GGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCA  392
      |||||||| ||||||||||||||   |||||||||||||||||| |||||
seq2  GGTGAAATAAACCAAGTGGAAAC---AAGAACTATTCAAAGAATCAACCA  383

seq1  AACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGA-TAAACCCTTA  441
      || |||||| ||||||||||| ||  |||| |||||||| ||||||||||
seq2  AATGAGGAGCTGGTTCTTTGAAAACGTCAATAAGATAGATTAAACCCTTA  433

seq1  GCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAG  491
      || ||| |||||| ||||||||| || |  ||| ||||||||||||||||
seq2  GCCAGAATCACTACAGGGCACAGAGAAAGCATCTTAATTAACAAAATCAG  483

seq1  AAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCC  532
      ||||||||||||||| |||||||||||||||||||||||||
seq2  AAATGAAAAGGGAGAAATAACAACAGATCCTGAAGAAATCC  524