BAC Information

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BAC

Clone NameB6Ng01-208D10
Chromosome1 (Build37)
Map Location 177,013,644 - 177,014,796
singlet/doubletsinglet
Overlap geneRgs7
Upstream geneOlfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
Downstream geneFh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208D10.bB6Ng01-208D10.g
ACCGA027152GA027153
length1,165500
definitionB6Ng01-208D10.b B6Ng01-208D10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcagccacatacttcccttgcccacttccatgacctgaattg
ctctgtcgtgcttttccaccatgaaggaataaaatttcctgaaattgtga
gccaaaatacgcctttcctcctttgtttctgttgggcattatgacataaa
cactgactaatacagacattttctactttgtcaaaatatcagtctgggag
ttctaaattatggagtcaagttttaaagttctaaatttatatagccaaca
aattcagaggcagtacaaaaataaacaatgaaaaggaagatgataatgcc
agatagcttttgtcttgctagtctttcttccatctttaagtggcaggaat
gaaatttgtttacacgattgtgatactatgagagtgacaggtgccttcca
tctaaaataactatacacaacagtgtctctttggctcacaataacaaaac
gtgacttaccttaagttctctgagctgaattctgattctagaaacttaag
gaactgctctcgcccaactgggtctttcaatgcctcatccataccaaaac
cccatcgttttaccctctgttgacttggttctttgctgtgaaagaggaaa
taaggctaaatatattccttgtattataattgtcattttgttggggatgg
gtaaggtagggcaggctttggagatgtagccctggtttgcttacaactca
ctgtgtagcctaggatggccttggactcacaaagatccgtggatctcaag
tgctagaattaaagatatatgtcaccatgtctgggccagttcctattttc
tttattatatatacaccttataagaatgcccgtatttaacttatcttctg
taacagtagtatgctaccgactgactactccttatgaactcacaatgagg
ggatgagttagattcgatcttaactcccatggatcatctgtcactaattg
cctggaatggagtcttcacaacttttatgagaactagtatcctttctctg
actttaatagacaaagcttattgcattaaagagttataacttaatgccat
gtcatacagagtaggggctaaaatctagtcacctgttacccagaagccca
attcaaccatttatattagttcaagcactataataggtccaaccactata
tttgttccagtttgt
gaattcaaatgatatgtactcacagataagtggatattgcccagaaactt
agtatagcgagatataaggtacaatttgcaaaacacatgaaactgaagaa
gaacgaagaccaaagtgtggacgctttgccccttcttagaattggaaaca
atcacccatggaaggagttacagagacaaagtttggagctgagacaaaag
gatggaccatctagagactgccatatccagggatccatcccataattagc
ctccaaacgatgacaccattgcatacactagcaagcgttttgttgcaagg
accgtgatatagctgtctcttgtgagactaggctggggcctagcaaacac
agaagtggatgctcacagtcaactattggatggatcacagggcccccaat
ggaggagctagagaaagtagccaaggagctaaagggatctgcaaccctat
aggtgaaacaacaatatgaactaaccagtaccccccagagctcttgactc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_177013644_177014796
seq2: B6Ng01-208D10.b_48_1212

seq1  GAATTCTCTCAGCCACATACTTCCCTTGCCCACTTCCATGACCTGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGCCACATACTTCCCTTGCCCACTTCCATGACCTGAATTG  50

seq1  CTCTGTCGTGCTTTTCCACCATGAAGGAATAAAATTTCCTGAAATTGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCGTGCTTTTCCACCATGAAGGAATAAAATTTCCTGAAATTGTGA  100

seq1  GCCAAAATACGCCTTTCCTCCTTTGTTTCTGTTGGGCATTATGACATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATACGCCTTTCCTCCTTTGTTTCTGTTGGGCATTATGACATAAA  150

seq1  CACTGACTAATACAGACATTTTCTACTTTGTCAAAATATCAGTCTGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACTAATACAGACATTTTCTACTTTGTCAAAATATCAGTCTGGGAG  200

seq1  TTCTAAATTATGGAGTCAAGTTTTAAAGTTCTAAATTTATATAGCCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTATGGAGTCAAGTTTTAAAGTTCTAAATTTATATAGCCAACA  250

seq1  AATTCAGAGGCAGTACAAAAATAAACAATGAAAAGGAAGATGATAATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGAGGCAGTACAAAAATAAACAATGAAAAGGAAGATGATAATGCC  300

seq1  AGATAGCTTTTGTCTTGCTAGTCTTTCTTCCATCTTTAAGTGGCAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCTTTTGTCTTGCTAGTCTTTCTTCCATCTTTAAGTGGCAGGAAT  350

seq1  GAAATTTGTTTACACGATTGTGATACTATGAGAGTGACAGGTGCCTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGTTTACACGATTGTGATACTATGAGAGTGACAGGTGCCTTCCA  400

seq1  TCTAAAATAACTATACACAACAGTGTCTCTTTGGCTCACAATAACAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATAACTATACACAACAGTGTCTCTTTGGCTCACAATAACAAAAC  450

seq1  GTGACTTACCTTAAGTTCTCTGAGCTGAATTCTGATTCTAGAAACTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTACCTTAAGTTCTCTGAGCTGAATTCTGATTCTAGAAACTTAAG  500

seq1  GAACTGCTCTCGCCCAACTGGGTCTTTCAATGCCTCATCCATACCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTCTCGCCCAACTGGGTCTTTCAATGCCTCATCCATACCAAAAC  550

seq1  CCCATCGTTTTACCCTCTGTTGACTTGGTTCTTTGCTGTGAAAGAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGTTTTACCCTCTGTTGACTTGGTTCTTTGCTGTGAAAGAGGAAA  600

seq1  TAAGGCTAAATATATTCCTTGTATTATAATTGTCATTTTGTTGGGGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTAAATATATTCCTTGTATTATAATTGTCATTTTGTTGGGGATGG  650

seq1  GTAAGGTAGGGCAGGCTTTGGAGATGTAGCCCTGGTTTGCTTACAACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTAGGGCAGGCTTTGGAGATGTAGCCCTGGTTTGCTTACAACTCA  700

seq1  CTGTGTAGCCTAGGATGGCCTTGGACTCACAAAGATCCGTGGATCTCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAGCCTAGGATGGCCTTGGACTCACAAAGATCCGTGGATCTCAAG  750

seq1  TGCTAGAATTAAAGATATATGTCACCATGTCTGGGCCAGTTCCTATTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAATTAAAGATATATGTCACCATGTCTGGGCCAGTTCCTATTTTC  800

seq1  TTTATTATATATACACCTTATAAGAATGCCCGTATTTAACTTATCTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATATATACACCTTATAAGAATGCCCGTATTTAACTTATCTTCTG  850

seq1  TAACAGTAGTATGCTACCGACTGACTACTCCTTATGAACTCACAATGA-G  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAACAGTAGTATGCTACCGACTGACTACTCCTTATGAACTCACAATGAGG  900

seq1  GGATGAGTTAGATTCGATC-TAACTCCCATGGATCATCTGTCACTAATTG  948
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGATGAGTTAGATTCGATCTTAACTCCCATGGATCATCTGTCACTAATTG  950

seq1  CCTGG-ATGGAGTCTTCACAAC-TTTATGAG-ACTAGTATCCCTTCTCTG  995
      ||||| |||||||||||||||| |||||||| |||||||||| |||||||
seq2  CCTGGAATGGAGTCTTCACAACTTTTATGAGAACTAGTATCCTTTCTCTG  1000

seq1  ACTTT-ATAGACAAAGC-TAATGTA-TAAAGAGTTATAACTTAATGCCAT  1042
      ||||| ||||||||||| || || | ||||||||||||||||||||||||
seq2  ACTTTAATAGACAAAGCTTATTGCATTAAAGAGTTATAACTTAATGCCAT  1050

seq1  GTCATACAAGGAGTAAGGGGCAAAAATCTAGTCA-CTGTTACCCAGAGCC  1091
      ||||||||  |||| |||||| |||||||||||| ||||||||||||  |
seq2  GTCATACA--GAGT-AGGGGCTAAAATCTAGTCACCTGTTACCCAGAAGC  1097

seq1  CCATTTCAACCA-TTATA-TAGTCCAACCACTAT-ATA-GTCCAACCACT  1137
      ||| |||||||| ||||| |||| ||| |||||| ||| |||||||||||
seq2  CCAATTCAACCATTTATATTAGTTCAAGCACTATAATAGGTCCAACCACT  1147

seq1  ATATT--GTCCAGTTTGT  1153
      |||||   ||||||||||
seq2  ATATTTGTTCCAGTTTGT  1165