BAC Information

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BAC

Clone NameB6Ng01-208M24
Chromosome1 (Build37)
Map Location 126,709,615 - 126,860,655
singlet/doubletdoublet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208M24.bB6Ng01-208M24.g
ACCGA027591GA027592
length1,163436
definitionB6Ng01-208M24.b B6Ng01-208M24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,709,615 - 126,710,787)(126,860,214 - 126,860,655)
sequence
gaattcccttttacagagatgcagaaacatcattctttggggatactgag
agcacatcattagatactttttggttattactggtttgaagtatttgagg
atttagtcaattaacccagacaagactccttcatgggaagctcagaagca
ggactccatcaaattcttaaaataataccaaggggaaaccctgtgcagat
gaactttagttaatggtactcactcccttagtattgctggagtccaggtg
ttttagcatgtcaattgaagtgagcattcctttttccccatgttctcccc
tctatttcctggagaatctgcttcacagggacgagggctgctccatttca
gctctttgacattgttgggaaaaatgctgcaggagtgtcaggagttattc
gtctctccttaagttcagttcagtcatttgttcttccaggacatataagc
cataagcaactcctgaggcccattttcctggtagaagactgaggaggttg
ataagaacagcctggcactaaatttcatgtttgttttgcctcagagggca
aagattcctttgtttagtattataaaaccttattaatacttcagttggta
aagtacatgtgtgaggacctgaaggagactcttcatagaccatctgtaaa
attctaggcggtggtggcatgggattctaatcccagtgctggagaaggag
aaatgggtagaaccctgaggcacaaagaccaggcagcctaacctgcctgg
taagttccaaaatactgagaaactcactctcagaaaggtgaacatcccct
aattaacaatgcccaagattgccctcaggcctccccatgcctatacacac
acgtgtgcctgtgtatgtgcaaaaacatgggacacatacatacctgaaca
catagtcttacacatatatacaaaagagtgtttttaaagtaaagaattcc
tcatgtacttgaacactatcctcatccattgggtcaagcctgtatcaagc
ctgtttcagctttcccttgcagaaaagtaagatcactatgtcccaagacg
atagatcaacagcacaaactcctgtatttcaaagaaaggtcgccacctta
ttcctctgacctctctcatgagattctgtggagcctgttcattcatcttc
ctaagaacacaga

ctgcaatgcactcctgcacatgctctcctgcatatgtactcctgtacatg
tacacctgcacatgtactcctgcacatgtacagaaacaagaataaaacag
taaacaattaaatgataaaagggaaatgcaatgtgatattttattttatg
ttttcctttctattttagatatttccaaaccattccattttgttatggta
gtaaatgacaaaaggtataatattcttatatttttggttgtgactctagc
ttttttgatggagtcctctctctagcccaggtataatattttaaagattt
gtatgccaatatttcattcactcttctcaaatgcattgttaatggtttga
ttcttgtttgatatagctacaaaaatttccctgtagcaagaagagtgaag
aagagaaggaggagaaggaagaggaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126709615_126710787
seq2: B6Ng01-208M24.b_48_1210

seq1  GAATTCCCTTTTACAGAGATGCAGAAACATCATTCTTTGGGGATACTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTTACAGAGATGCAGAAACATCATTCTTTGGGGATACTGAG  50

seq1  AGCACATCATTAGATACTTTTTGGTTATTACTGGTTTGAAGTATTTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATCATTAGATACTTTTTGGTTATTACTGGTTTGAAGTATTTGAGG  100

seq1  ATTTAGTCAATTAACCCAGACAAGACTCCTTCATGGGAAGCTCAGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCAATTAACCCAGACAAGACTCCTTCATGGGAAGCTCAGAAGCA  150

seq1  GGACTCCATCAAATTCTTAAAATAATACCAAGGGGAAACCCTGTGCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCATCAAATTCTTAAAATAATACCAAGGGGAAACCCTGTGCAGAT  200

seq1  GAACTTTAGTTAATGGTACTCACTCCCTTAGTATTGCTGGAGTCCAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAGTTAATGGTACTCACTCCCTTAGTATTGCTGGAGTCCAGGTG  250

seq1  TTTTAGCATGTCAATTGAAGTGAGCATTCCTTTTTCCCCATGTTCTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCATGTCAATTGAAGTGAGCATTCCTTTTTCCCCATGTTCTCCCC  300

seq1  TCTATTTCCTGGAGAATCTGCTTCACAGGGACGAGGGCTGCTCCATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCCTGGAGAATCTGCTTCACAGGGACGAGGGCTGCTCCATTTCA  350

seq1  GCTCTTTGACATTGTTGGGAAAAATGCTGCAGGAGTGTCAGGAGTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGACATTGTTGGGAAAAATGCTGCAGGAGTGTCAGGAGTTATTC  400

seq1  GTCTCTCCTTAAGTTCAGTTCAGTCATTTGTTCTTCCAGGACATATAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCTTAAGTTCAGTTCAGTCATTTGTTCTTCCAGGACATATAAGC  450

seq1  CATAAGCAACTCCTGAGGCCCATTTTCCTGGTAGAAGACTGAGGAGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGCAACTCCTGAGGCCCATTTTCCTGGTAGAAGACTGAGGAGGTTG  500

seq1  ATAAGAACAGCCTGGCACTAAATTTCATGTTTGTTTTGCCTCAGAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACAGCCTGGCACTAAATTTCATGTTTGTTTTGCCTCAGAGGGCA  550

seq1  AAGATTCCTTTGTTTAGTATTATAAAACCTTATTAATACTTCAGTTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCCTTTGTTTAGTATTATAAAACCTTATTAATACTTCAGTTGGTA  600

seq1  AAGTACATGTGTGAGGACCTGAAGGAGACTCTTCATAGACCATCTGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATGTGTGAGGACCTGAAGGAGACTCTTCATAGACCATCTGTAAA  650

seq1  ATTCTAGGCGGTGGTGGCATGGGATTCTAATCCCAGTGCTGGAGAAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGGCGGTGGTGGCATGGGATTCTAATCCCAGTGCTGGAGAAGGAG  700

seq1  AAATGGGTAGAACCCTGAGGCACAAAGACCAGGCAGCCTAACCTGCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTAGAACCCTGAGGCACAAAGACCAGGCAGCCTAACCTGCCTGG  750

seq1  TAAGTTCCAAAATACTGAGAAACTCACTCTCAGAAAGGTGAACATCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCAAAATACTGAGAAACTCACTCTCAGAAAGGTGAACATCCCCT  800

seq1  AATTAACAATGCCCAAGATTGCCCTCAGGCCTCCCCATGCCTATACACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACAATGCCCAAGATTGCCCTCAGGCCTCCCCATGCCTATACACAC  850

seq1  ACGTGTGCCTGTGTATGTGCAAAAACAT-GGACACATACATACCTGAACA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACGTGTGCCTGTGTATGTGCAAAAACATGGGACACATACATACCTGAACA  900

seq1  CATAGTCTTACACATATATACAAAAGAGTGTTTTTAAAGTAAAGAATTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCTTACACATATATACAAAAGAGTGTTTTTAAAGTAAAGAATTCC  950

seq1  TCATGTACTTGAACACTAT-CTCATCCATTGGGTCAAGCCTGTATCAAAG  998
      ||||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  TCATGTACTTGAACACTATCCTCATCCATTGGGTCAAGCCTGTATC-AAG  999

seq1  CCTGTTTCAAGCTTTCCCTTGCCAGAAAGTAAGATCACTATGTCCCAAGA  1048
      |||||||| |||||||||||||   |||||||||||||||||||||||||
seq2  CCTGTTTC-AGCTTTCCCTTGCAGAAAAGTAAGATCACTATGTCCCAAGA  1048

seq1  CGATAGAATCAAACAGCACAAACTCCTGGAATTTTCCAAAGAAAAGTCGC  1098
      |||||| ||| |||||||||||||||||   | || |||||||| |||||
seq2  CGATAG-ATC-AACAGCACAAACTCCTG---TATTTCAAAGAAAGGTCGC  1093

seq1  CACCTTTATTCTCTGACCTCTCTCATGAGGATTCTGT-GAGTCTGTTCTT  1147
      ||||||  | |||||||||||||||||| |||||||| ||| ||||||  
seq2  CACCTTATTCCTCTGACCTCTCTCATGA-GATTCTGTGGAGCCTGTTC-A  1141

seq1  TTCATTTCTTCCCCTAGAGACACAGA  1173
      ||||  ||||  ||||   |||||||
seq2  TTCA--TCTT--CCTAAGAACACAGA  1163


seq1: chr1_126860214_126860655
seq2: B6Ng01-208M24.g_65_506 (reverse)

seq1  CCTCCTCCTCCTCCTCTTCCTTCTCCTCCTTCTCTTCTTCACTCTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCCTCTTCCTTCTCCTCCTTCTCTTCTTCACTCTTCTTG  50

seq1  CTACAGGGAAATTTTTGTAGCTATATCAAACAAGAATCAAACCATTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGGAAATTTTTGTAGCTATATCAAACAAGAATCAAACCATTAACA  100

seq1  ATGCATTTGAGAAGAGTGAATGAAATATTGGCATACAAATCTTTAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTGAGAAGAGTGAATGAAATATTGGCATACAAATCTTTAAAATA  150

seq1  TTATACCTGGGCTAGAGAGAGGACTCCATCAAAAAAGCTAGAGTCACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTGGGCTAGAGAGAGGACTCCATCAAAAAAGCTAGAGTCACAAC  200

seq1  CAAAAATATAAGAATATTATACCTTTTGTCATTTACTACCATAACAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATATAAGAATATTATACCTTTTGTCATTTACTACCATAACAAAAT  250

seq1  GGAATGGTTTGGAAATATCTAAAATAGAAAGGAAAACATAAAATAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGTTTGGAAATATCTAAAATAGAAAGGAAAACATAAAATAAAATA  300

seq1  TCACATTGCATTTCCCTTTTATCATTTAATTGTTTACTGTTTTATTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGCATTTCCCTTTTATCATTTAATTGTTTACTGTTTTATTCTTG  350

seq1  TTTCTGTACATGTGCAGGAGTACATGTGCAGGTGTACATGTACAGGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTACATGTGCAGGAGTACATGTGCAGGTGTACATGTACAGGAGTA  400

seq1  CATATGCAGGAGAGCATGTGCAGGAGTGCATTGCAGGAATTC  442
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAGGAGAGCATGTGCAGGAGTGCATTGCAGGAATTC  442


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