BAC Information

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BAC

Clone NameB6Ng01-209D14
Chromosome1 (Build37)
Map Location 101,995,407 - 102,119,147
singlet/doubletdoublet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209D14.bB6Ng01-209D14.g
ACCGA027897GA027898
length1,155674
definitionB6Ng01-209D14.b B6Ng01-209D14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,117,980 - 102,119,147)(101,995,407 - 101,996,079)
sequence
gaattcaattgttagcagaaagaaaatactcatttcctcttccagccata
atgacagaggtatcactgagtcaggagcaagggaataattgccagggtct
caatcattgcattagatgccagcaggaaatcttcactgctgcaaactgac
tttgacagccactcaactgacagtataataaactcagtttcatgtcctgc
tacagcaatggatactgttctttcttttttatgttgtctgcacatattta
gttttttacatgtcctatttatactaggtctcttaaaattggattcacct
acagctatatcaactgaaggatggtttacaaggccctttgagaattcatg
ggacttaatgtcaaaagatttaagaaatattcattgaaagaaaagctaga
gcctcagtcctttcactacttaaaagtgagaaatttctccataagtgatg
atggaaagaaaaacatgggttatgtgatattgtctttagttccatcaggg
tagagctttcagaaagaaatgccaacaagaaagtttaccactctactttc
tcagtatttttgtttttgttttttccacaaacagatttctaaacctagta
ctagttttaggaaacacaattaaagccaatgcttctgacgccaaagacca
agaaaaagacgaagaatttacttatggcaaccaggtgtacatgtagtcta
agagaagaatgttgaattaaataacaaattacctgaaaaacacaaagtta
gatctggcaggaagtggccaagttgaaataaagccaacagacaggaagag
ggagaagttcttactatgaacaagtgaagacaagtggctcagagctgctc
taaagaagatcacagaagtcagggcttgaaattctctactcccagaaact
gaccacagagcttatatgtgttaagataaggaagaaggaataggaagctg
agttatttgggtgaagcataatggtctgattttggtgcccagagccacac
acaaaaagtgtgcctgggttgttgcccttgaaagtcctagtatggagcag
acatgtgagcactaaagtctgccagttaaaccaatgtatgaacaattttc
ttgtccacaaagaagaatcgagagatcctagtatggacttaggtctctac
tcaaa

gaattccataggtaggatattgaatgtctaccaattggttatattaaata
ggacattttaaatgctactgcactgttagtgtcttagggattcattgtgt
aagacttataatcccagtggattaaagaattttctaattcactaacatct
attttctgttacacatcagaagtagtatcaggagtctttaaaaaatttat
ccttgaatttctcctccatcctccaactgctcctatatctttctgttctc
ccttttaaatttacagcctttttcctttagttattattaaacacacacac
acatttgtacacacacacacacacacacacacacacacacacacacacac
aaaacctactgagtccatttattgttactcctatctttgtaggatgaact
gcttgagtttggacaaccaatcaaggagtttggccctggagaagacttat
ggtctctctcagcagccattaatttgttgaagctcttcatatagtaagat
ttccaaaatttggattggcatatcaactggtattttcactgtgcaggctt
tgcttaggagttgtattgtggagattgatgggtacagcttccttgacata
tatagacaacacaaatcacatgtcagatgttctaggtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102117980_102119147
seq2: B6Ng01-209D14.b_45_1199 (reverse)

seq1  TTTGAGGTAGGAGACCTAAGGTCCCATTACTTAGAATCTCTCGA-TCTTC  49
      ||||| ||| ||||||||| ||||   ||| ||| ||||||||| |||||
seq2  TTTGA-GTA-GAGACCTAA-GTCC--ATAC-TAGGATCTCTCGATTCTTC  44

seq1  TTTGT-GAC-AGAAAATGGTCAATACATTGGTTTAACTGGGCAGGAACTT  97
      ||||| ||| ||||||| ||  |||||||||||||||| |||||  ||||
seq2  TTTGTGGACAAGAAAATTGTTCATACATTGGTTTAACT-GGCAG--ACTT  91

seq1  TAAGTGCTCCACATGTCTTGCTTCCCAATTACTAGGACTTTCAAGGGCAA  147
      | |||||| |||||||| ||||  |||  |||||||||||||||||||||
seq2  T-AGTGCT-CACATGTC-TGCT--CCA--TACTAGGACTTTCAAGGGCAA  134

seq1  CAA-CCAGGCACACCTTTTTGTGTGTGGGCTCTGGGCACCAAAATCAGAC  196
      ||| ||||||||| |||||||||||| |||||||||||||||||||||||
seq2  CAACCCAGGCACA-CTTTTTGTGTGT-GGCTCTGGGCACCAAAATCAGAC  182

seq1  CATTATGCTTCA-CCAAATAACTCAGCTTCCTATTCCTTCTTCCTTATCT  245
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATTATGCTTCACCCAAATAACTCAGCTTCCTATTCCTTCTTCCTTATCT  232

seq1  TAACACATATAAGCTCTGTGGTCAGTTTCTGGGAGTAGAGAATTTCAAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATATAAGCTCTGTGGTCAGTTTCTGGGAGTAGAGAATTTCAAGC  282

seq1  CCTGACTTCTGTGATCTTCTTTAGAGCAGCTCTGAGCCACTTGTCTTCAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCTGTGATCTTCTTTAGAGCAGCTCTGAGCCACTTGTCTTCAC  332

seq1  TTGTTCATAGTAAGAACTTCTCCCTCTTCCTGTCTGTTGGCTTTATTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATAGTAAGAACTTCTCCCTCTTCCTGTCTGTTGGCTTTATTTCA  382

seq1  ACTTGGCCACTTCCTGCCAGATCTAACTTTGTGTTTTTCAGGTAATTTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCACTTCCTGCCAGATCTAACTTTGTGTTTTTCAGGTAATTTGT  432

seq1  TATTTAATTCAACATTCTTCTCTTAGACTACATGTACACCTGGTTGCCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATTCAACATTCTTCTCTTAGACTACATGTACACCTGGTTGCCAT  482

seq1  AAGTAAATTCTTCGTCTTTTTCTTGGTCTTTGGCGTCAGAAGCATTGGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTCTTCGTCTTTTTCTTGGTCTTTGGCGTCAGAAGCATTGGCT  532

seq1  TTAATTGTGTTTCCTAAAACTAGTACTAGGTTTAGAAATCTGTTTGTGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTGTTTCCTAAAACTAGTACTAGGTTTAGAAATCTGTTTGTGGA  582

seq1  AAAAACAAAAACAAAAATACTGAGAAAGTAGAGTGGTAAACTTTCTTGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAAATACTGAGAAAGTAGAGTGGTAAACTTTCTTGTT  632

seq1  GGCATTTCTTTCTGAAAGCTCTACCCTGATGGAACTAAAGACAATATCAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCTTTCTGAAAGCTCTACCCTGATGGAACTAAAGACAATATCAC  682

seq1  ATAACCCATGTTTTTCTTTCCATCATCACTTATGGAGAAATTTCTCACTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCATGTTTTTCTTTCCATCATCACTTATGGAGAAATTTCTCACTT  732

seq1  TTAAGTAGTGAAAGGACTGAGGCTCTAGCTTTTCTTTCAATGAATATTTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAGTGAAAGGACTGAGGCTCTAGCTTTTCTTTCAATGAATATTTC  782

seq1  TTAAATCTTTTGACATTAAGTCCCATGAATTCTCAAAGGGCCTTGTAAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTTTTGACATTAAGTCCCATGAATTCTCAAAGGGCCTTGTAAAC  832

seq1  CATCCTTCAGTTGATATAGCTGTAGGTGAATCCAATTTTAAGAGACCTAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTCAGTTGATATAGCTGTAGGTGAATCCAATTTTAAGAGACCTAG  882

seq1  TATAAATAGGACATGTAAAAAACTAAATATGTGCAGACAACATAAAAAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAGGACATGTAAAAAACTAAATATGTGCAGACAACATAAAAAAG  932

seq1  AAAGAACAGTATCCATTGCTGTAGCAGGACATGAAACTGAGTTTATTATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAGTATCCATTGCTGTAGCAGGACATGAAACTGAGTTTATTATA  982

seq1  CTGTCAGTTGAGTGGCTGTCAAAGTCAGTTTGCAGCAGTGAAGATTTCCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTTGAGTGGCTGTCAAAGTCAGTTTGCAGCAGTGAAGATTTCCT  1032

seq1  GCTGGCATCTAATGCAATGATTGAGACCCTGGCAATTATTCCCTTGCTCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCATCTAATGCAATGATTGAGACCCTGGCAATTATTCCCTTGCTCC  1082

seq1  TGACTCAGTGATACCTCTGTCATTATGGCTGGAAGAGGAAATGAGTATTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGTGATACCTCTGTCATTATGGCTGGAAGAGGAAATGAGTATTT  1132

seq1  TCTTTCTGCTAACAATTGAATTC  1168
      |||||||||||||||||||||||
seq2  TCTTTCTGCTAACAATTGAATTC  1155


seq1: chr1_101995407_101996079
seq2: B6Ng01-209D14.g_67_740

seq1  GAATTCCATAGGTAGGACATTGAATGTCTACCAATTGGTTATATTAAATA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGGTAGGATATTGAATGTCTACCAATTGGTTATATTAAATA  50

seq1  GGACATTTTAAATGCTACTGCACTGTTAGTGTCTTAGGGATTCATTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTTAAATGCTACTGCACTGTTAGTGTCTTAGGGATTCATTGTGT  100

seq1  AAGACTTATAATCCCAGTGGATTAAAGAATTTTCTAATTCACTAACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTATAATCCCAGTGGATTAAAGAATTTTCTAATTCACTAACATCT  150

seq1  ATTTTCTGTTACACATCAGAAGTAGTATCAGGAGTCTTTAAAAAATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTGTTACACATCAGAAGTAGTATCAGGAGTCTTTAAAAAATTTAT  200

seq1  CCTTGAATTTCTCCTCCATCCTCCAACTGCTCCTATATCTTTCTGTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAATTTCTCCTCCATCCTCCAACTGCTCCTATATCTTTCTGTTCTC  250

seq1  CCTTTTAAATTTACAGCCTTTTTCCTTTAGTTATTATTAAACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAATTTACAGCCTTTTTCCTTTAGTTATTATTAAACACACACAC  300

seq1  ACATTTGTACACACACACACACACACACACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTACACACACACACACACACACACACACACACACACACACACAC  350

seq1  AAAACCTACTGAGTCCATTTATTGTTACTCCTATCTTTGTAGGATGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTACTGAGTCCATTTATTGTTACTCCTATCTTTGTAGGATGAACT  400

seq1  GCTTGAGTTTGGACAACCAATCAAGGAGTTTGGCCCTGGAGAAGACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGTTTGGACAACCAATCAAGGAGTTTGGCCCTGGAGAAGACTTAT  450

seq1  GGTCTCTCTCAGCAGCCATTAATTTGTTGAAGCTCTTCATATAGTAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTCTCAGCAGCCATTAATTTGTTGAAGCTCTTCATATAGTAAGAT  500

seq1  TTCCAAAATTTGGATTGGCATATCAACTGGTATTTTCACTGTGCAGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAATTTGGATTGGCATATCAACTGGTATTTTCACTGTGCAGGCTT  550

seq1  TGCTTAGGAGTTGTATTGTGGAGATTGATGGGTACAGCTTCCTTGACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGGAGTTGTATTGTGGAGATTGATGGGTACAGCTTCCTTGACATA  600

seq1  TATAGACAACAC-AATCACATGTCAGATGTTCTAGGTGTGTGTGTGTGTG  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATAGACAACACAAATCACATGTCAGATGTTCTAGGTGTGTGTGTGTGTG  650

seq1  TGTGTGTGTGTGTGTGTGTGTGTG  673
      ||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTG  674


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