BAC Information

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BAC

Clone NameB6Ng01-210O12
Chromosome1 (Build37)
Map Location 144,619,909 - 144,620,126
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210O12.bB6Ng01-210O12.g
ACCGA029121GA029122
length1,212977
definitionB6Ng01-210O12.b B6Ng01-210O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatattgctctttcacggtccttgtcagtcgcatcgggacccaaa
gtagattttcttcaccctgtggaaaaaacacaaatagctccccgggacct
gattaagataggatccgggccatactatttattatcaaggacatttttcc
atttgaccatttcattgggtgattgaggccattgttcgtgtctttcagct
ggtgatctcccagcatcatccaattttaagaaattaaaagcaaatattgc
aagggatagagccatctttggtgtcatagcctctattccccctctttgtt
tttgaaaagtattgtttcaatgtatgatgagctctttcagtgatgccttg
gccctgtggattagagggcaatccagtaatatgtttctcttgcatttgtt
tgtaaaattgactaaatttagaagaggtatatgtaggactattgtctgtc
tacagcactagaggcttgccccatgtaatctaagcctctaagcagtggga
tatgacataaacttctttttcccctgtcaagggataggcatataggacat
cagagctggtatcgatggacacatgtacatattgtaagtcacatccatct
gccaaacatctaggggtcgcgaaccaaaagattaacacccatggaaggtg
cactaataaattttacacatttacctcactgtagaacaatatctcgagct
tctgttcatgtgagcttaaactttagtcgtaatgtagaagcatgaacatg
ataaagttaatgaaaatttttagcgccttttatagaactttatgatagga
aaaccatatctctgttggctgaatcagcaattgcatttcccttaatcata
ggtttaggtaaagacatatgtgttctaatatgttgaatataaagggatgc
tcacacatcaaaatacaatcttgtattttcatcaaaatttagatactgaa
ctagactgcttaaaattttggcagtctctaatgttatacagcattaacta
cataacagaatctgagatatatttatgggcataggaccttttaaaatgtt
taaaccaccaacatccaccaattgaggactctgtgtaaattgtaacatga
cattttcatatcacattaccttctgaattctgttggaatccatcggtcta
agtatccaataagctctccgttatatgcacggtgatatattgagcgccaa
atcacacccctg
cttctttatgtcctctaccatcatcatgagatatgcttttaaatccaggt
ctaccttttcaggtgtgttagggtgtcctggattgggcgaagtgggcgtt
ctgggttctgatgatggtgagtggtcctggcttctgttagtaggattctt
acgtttacctttcgccatctggcaatctctggagttagttgttatatttg
tctttgttaagagattgttcctctgttgattttgttaccctctatcagca
ggcgtgggagacaagctctcttctctgagtttcagtggtcagagcagtct
ctgtaggcaagctctcttctttcagggaaggtgtacagttatctggtgtt
tggaccgcctcctggctgaaggtgaaggcccaaaacaggatctttcccag
aagctgtgttgctttggccaggaaggtggccagttgtctggagtcgaaga
tgtcgccgcctcagaagctctgtggctcttgtccggaaggaggccggccg
tctggagctgaggatggcgccgcctcaggagctctgtggctcttgccggg
aaggtggctggttctctggagctgaagatggcgccgcccagaagctctgc
gactctcgcccgtcacagaaacggctggcactctgtattccacatggtca
cccgtgcagcctgccctccgcggagtcccggagccaagaaaggctcccgc
cggcgcctgtgccacaaacctctcaggccgggcagacccccgtgctctca
ccaggaaggtggcccggctgtctggagctgaagatggcgccgcccagaag
ctctgcgtctctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgccgagttccagagccagaaggctc
ccgccggtgcctgtgacacaaacttctcaagccaggcagacccccgtgct
ctcaccagaaggtggcccggcctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144619909_144620126
seq2: B6Ng01-210O12.g_582_1120 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  AGACAGGCCGGGCCACCTTCTGGTGAGAGCACGGGGGTCTGCCTGGCTTG  50

seq1  --------------------------------------------------  0
                                                        
seq2  AGAAGTTTGTGTCACAGGCACCGGCGGGAGCCTTCTGGCTCTGGAACTCG  100

seq1  --------------------------------------------------  0
                                                        
seq2  GCGGAGGGCAGGCTGCACGGGTGACCGTGTGGAATACAGAGTGCCAGCCG  150

seq1  --------------------------------------------------  0
                                                        
seq2  TTTCTGGGACGGGCGAGAGACGCAGAGCTTCTGGGCGGCGCCATCTTCAG  200

seq1  ----AGACAGCC-GGCCACCTTCCTGGTGAGAGCACGGGGGTCTGCC---  42
          |||||||| ||||||||||||||||||||||||||||||||||   
seq2  CTCCAGACAGCCGGGCCACCTTCCTGGTGAGAGCACGGGGGTCTGCCCGG  250

seq1  -------------------------------------------------G  43
                                                       |
seq2  CCTGAGAGGTTTGTGGCACAGGCGCCGGCGGGAGCCTTTCTTGGCTCCGG  300

seq1  GACTCCGCGGAGGGCAGGCTGCACGGGAGACTGTGTGGAATACAGAG-GC  92
      ||||||||||||||||||||||||||| |||  |||||||||||||| ||
seq2  GACTCCGCGGAGGGCAGGCTGCACGGGTGACCATGTGGAATACAGAGTGC  350

seq1  CAGCCGTTTCTGGGACGGGCGAGAGTCGCAGAGCTTCTGGGGCGGCGCCA  142
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  CAGCCGTTTCTGTGACGGGCGAGAGTCGCAGAGCTTCT-GGGCGGCGCCA  399

seq1  TCTTCATCTCCAGACAACCTGCCACCTTCCTGGCGAGAGCCACAGAGCTT  192
      |||||| ||||||| |||| |||||||||| ||| |||||||||||||| 
seq2  TCTTCAGCTCCAGAGAACCAGCCACCTTCCCGGCAAGAGCCACAGAGCTC  449

seq1  CTGAGGTGGCGACATCTTCGACTCCA------------------------  218
      |||||| |||| |||| ||  |||||                        
seq2  CTGAGGCGGCGCCATCCTCAGCTCCAGACGGCCGGCCTCCTTCCGGACAA  499

seq1  ----------------------------------------  218
                                              
seq2  GAGCCACAGAGCTTCTGAGGCGGCGACATCTTCGACTCCA  539