BAC Information

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BAC

Clone NameB6Ng01-210O23
Chromosome1 (Build37)
Map Location 143,350,217 - 143,480,594
singlet/doubletdoublet
Overlap genenone
Upstream geneKcnt2, EG226472
Downstream geneLOC639376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210O23.bB6Ng01-210O23.g
ACCGA029143GA029144
length980503
definitionB6Ng01-210O23.b B6Ng01-210O23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,350,217 - 143,351,021)(143,480,086 - 143,480,594)
sequence
gaattcaatgaacatagttctattgggcctggtgataggcagttaaaaca
cagcttctcatattcctactttcctcaatagtgtctgtttgtagtctatg
ctccttcattcccctctgtttgtcaggaccatatatgtataatcatatat
agcaaagaggagggactatttatatctcaattatcatatatatatatcac
aaatatcagggactggtggagcatagaatataatagaatatggaaagaca
ctactgaggaaactaggactataaaaaccaattgagtgttccaatggctt
agataatttttccttattactgtttcaggttttacagcctttgccttaaa
gaaggatggatacttaaattactgttttcctgcctccactcccatctgca
cccatggcgcacagcctcacaagtgatgatttagtgggcccttccattac
attgatacaattcgttactaaatctagcaattaaagcactggtatttcct
gatcactctaattttttttttttgtattggaccattgttaatgaccaatc
tgtttacctagttttttttttctgccttgtttcctattaaaggtaacctc
tatatcaacctcttagttatctaattcacttggaaaatctaaagataact
cagagaatactggcagcgtcttcctttcttgatgcaacttctcctttaca
gaaacacattcctacttggctaccctgttggcctcatgtgtatttctaac
tacatacaaaagtaaccaggcaacctccaccactgagcagtcttaactca
agtgcactaatactaaagactataaaatttactctaaacctttaactgtc
ttaaggatatttccatgttcatgtgatgaatctcactcattaagcagaca
tgcagcgccataccacatagacaaatactgtcatcccgtgatttttttct
gcagcattttaatcctactggttcatgtgt
tgatatgcctgcctttgtatattacctggaatctttcccttgttgctttt
aatattccttcctttttctctagattttgctttttgattacaatttggcc
agaggattttcatttctggtccagtctcattggttttttttggttttttt
ttttttgttttttttttttttgtttttttttacttgcttatatagttatc
attttattccactaaagtctatttaggttgttaactcattctctcattgg
gttttttgtttgtttgtttgtttgtttgtttgtattttttttgactgctt
ggtttttttttcttttttcttttttctttatattagtattttcttcattt
acatttccaatgctattccaaaagtcccccatgccctcccccccctctcc
tccccacccctcactcccacttcttggccctggcattcccctgtacttag
gcaaataaagtttgcaagaccaatgggcctctttttctactgatggccaa
tta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_143350217_143351021
seq2: B6Ng01-210O23.b_43_847

seq1  GAATTCAATGAACATAGTTCTATTGGGCCTGGTGATAGGCAGTTAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAACATAGTTCTATTGGGCCTGGTGATAGGCAGTTAAAACA  50

seq1  CAGCTTCTCATATTCCTACTTTCCTCAATAGTGTCTGTTTGTAGTCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTCATATTCCTACTTTCCTCAATAGTGTCTGTTTGTAGTCTATG  100

seq1  CTCCTTCATTCCCCTCTGTTTGTCAGGACCATATATGTATAATCATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCATTCCCCTCTGTTTGTCAGGACCATATATGTATAATCATATAT  150

seq1  AGCAAAGAGGAGGGACTATTTATATCTCAATTATCATATATATATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAGGAGGGACTATTTATATCTCAATTATCATATATATATATCAC  200

seq1  AAATATCAGGGACTGGTGGAGCATAGAATATAATAGAATATGGAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAGGGACTGGTGGAGCATAGAATATAATAGAATATGGAAAGACA  250

seq1  CTACTGAGGAAACTAGGACTATAAAAACCAATTGAGTGTTCCAATGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGGAAACTAGGACTATAAAAACCAATTGAGTGTTCCAATGGCTT  300

seq1  AGATAATTTTTCCTTATTACTGTTTCAGGTTTTACAGCCTTTGCCTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTTTCCTTATTACTGTTTCAGGTTTTACAGCCTTTGCCTTAAA  350

seq1  GAAGGATGGATACTTAAATTACTGTTTTCCTGCCTCCACTCCCATCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGGATACTTAAATTACTGTTTTCCTGCCTCCACTCCCATCTGCA  400

seq1  CCCATGGCGCACAGCCTCACAAGTGATGATTTAGTGGGCCCTTCCATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGCGCACAGCCTCACAAGTGATGATTTAGTGGGCCCTTCCATTAC  450

seq1  ATTGATACAATTCGTTACTAAATCTAGCAATTAAAGCACTGGTATTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATACAATTCGTTACTAAATCTAGCAATTAAAGCACTGGTATTTCCT  500

seq1  GATCACTCTAATTTTTTTTTTTTGTATTGGACCATTGTTAATGACCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTCTAATTTTTTTTTTTTGTATTGGACCATTGTTAATGACCAATC  550

seq1  TGTTTACCTAGTTTTTTTTTTCTGCCTTGTTTCCTATTAAAGGTAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTAGTTTTTTTTTTCTGCCTTGTTTCCTATTAAAGGTAACCTC  600

seq1  TATATCAACCTCTTAGTTATCTAATTCACTTGGAAAATCTAAAGATAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAACCTCTTAGTTATCTAATTCACTTGGAAAATCTAAAGATAACT  650

seq1  CAGAGAATACTGGCAGCGTCTTCCTTTCTTGATGCAACTTCTCCTTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATACTGGCAGCGTCTTCCTTTCTTGATGCAACTTCTCCTTTACA  700

seq1  GAAACACATTCCTACTTGGCTACCCTGTTGGCCTCATGTGTATTTCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACATTCCTACTTGGCTACCCTGTTGGCCTCATGTGTATTTCTAAC  750

seq1  TACATACAAAAGTAACCAGGCAACCTCCACCACTGAGCAGTCTTAACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACAAAAGTAACCAGGCAACCTCCACCACTGAGCAGTCTTAACTCA  800

seq1  AGTGC  805
      |||||
seq2  AGTGC  805

seq1: chr1_143480086_143480594
seq2: B6Ng01-210O23.g_66_574 (reverse)

seq1  TAATTGGCCATCAGTGGAAAAAGAGGCCCATTGGTCTTGCAAACTTTATT  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAATTGGCCATCAGTAGAAAAAGAGGCCCATTGGTCTTGCAAACTTTATT  50

seq1  TGCCTAAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGGGGGGTGG  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCCTAAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTGAGGGGTGG  100

seq1  GGAGGAGAGGGGGGGGAGGGCATGGGGGACTTTTGGAATAGCATTGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGAGGGGGGGGAGGGCATGGGGGACTTTTGGAATAGCATTGGAAA  150

seq1  TGTAAATGAAGAAAATACTAATATAAAGAAAAAAGAAAAAAGAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAGAAAATACTAATATAAAGAAAAAAGAAAAAAGAAAAAAAA  200

seq1  ACCAAGCAGTCAAAAAAAATACAAACAAACAAACAAACAAACAAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCAGTCAAAAAAAATACAAACAAACAAACAAACAAACAAACAAAA  250

seq1  AACCCAATGAGAGAATGAGTTAACAACCTAAATAGACTTTAGTGGAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATGAGAGAATGAGTTAACAACCTAAATAGACTTTAGTGGAATAA  300

seq1  AATGATAACTATATAAGCAAGTAAAAAAAAACAAAAAAAAAAAAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAACTATATAAGCAAGTAAAAAAAAACAAAAAAAAAAAAAACAAA  350

seq1  AAAAAAAAAACCAAAAAAAACCAATGAGACTGGACCAGAAATGAAAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACCAAAAAAAACCAATGAGACTGGACCAGAAATGAAAATCC  400

seq1  TCTGGCCAAATTGTAATCAAAAAGCAAAATCTAGAGAAAAAGGAAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAAATTGTAATCAAAAAGCAAAATCTAGAGAAAAAGGAAGGAAT  450

seq1  ATTAAAAGCAACAAGGGAAAGATTCCAGGTAATATACAAAGGCAGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGCAACAAGGGAAAGATTCCAGGTAATATACAAAGGCAGGCATA  500

seq1  TCAGAATTC  509
      |||||||||
seq2  TCAGAATTC  509